RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 H7C1D1 291 aa10.17□□□□□ -0.78
LSM5-202ENST00000409292 BBOX1O75936 387 aa10.17□□□□□ -0.78
LSM5-202ENST00000409292 EPS15P42566 896 aa10.17□□□□□ -0.78
LSM5-202ENST00000409292 DPP8Q6V1X1 898 aaPredicted RBP10.17□□□□□ -0.78
LSM5-202ENST00000409292 GIGYF2Q6Y7W6 1299 aaKnown RBP10.17□□□□□ -0.78
LSM5-202ENST00000409292 UTP14AQ9BVJ6 771 aaKnown RBP10.17□□□□□ -0.78
LSM5-202ENST00000409292 MIS18AQ9NYP9 233 aa10.17□□□□□ -0.78
LSM5-202ENST00000409292 CELF2O95319 508 aaKnown RBP10.16□□□□□ -0.78
LSM5-202ENST00000409292 SLC34A2O95436 690 aa10.16□□□□□ -0.78
LSM5-202ENST00000409292 SCNN1DP51172 638 aa10.16□□□□□ -0.78
LSM5-202ENST00000409292 AOC3Q16853 763 aa10.16□□□□□ -0.78
LSM5-202ENST00000409292 SUSD4Q5VX71 490 aa10.16□□□□□ -0.78
LSM5-202ENST00000409292 CIAPIN1Q6FI81 312 aa10.16□□□□□ -0.78
LSM5-202ENST00000409292 CYP4F22Q6NT55 531 aa10.16□□□□□ -0.78
LSM5-202ENST00000409292 DDX46Q7L014 1031 aaKnown RBP10.16□□□□□ -0.78
LSM5-202ENST00000409292 TMC4Q7Z404 712 aa10.16□□□□□ -0.78
LSM5-202ENST00000409292 MPNDQ8N594 471 aa10.16□□□□□ -0.78
LSM5-202ENST00000409292 ZC3H15Q8WU90 426 aaKnown RBP10.16□□□□□ -0.78
LSM5-202ENST00000409292 GPRC5DQ9NZD1 345 aa10.16□□□□□ -0.78
LSM5-202ENST00000409292 ATP6V0A2Q9Y487 856 aa10.16□□□□□ -0.78
LSM5-202ENST00000409292 TLL2Q9Y6L7 1015 aa10.16□□□□□ -0.78
LSM5-202ENST00000409292 ABCC12Q96J65 1359 aa10.15□□□□□ -0.78
LSM5-202ENST00000409292 EIF4A1P60842 406 aaKnown RBP10.15□□□□□ -0.78
LSM5-202ENST00000409292 LMOD3Q0VAK6 560 aa10.15□□□□□ -0.78
LSM5-202ENST00000409292 NFE2L2Q16236 605 aa10.15□□□□□ -0.78
LSM5-202ENST00000409292 FAM161AQ3B820 660 aa10.15□□□□□ -0.78
LSM5-202ENST00000409292 ARSIQ5FYB1 569 aa10.15□□□□□ -0.78
LSM5-202ENST00000409292 VARS2Q5ST30 1063 aaKnown RBP10.15□□□□□ -0.78
LSM5-202ENST00000409292 TTLL7Q6ZT98 887 aa10.15□□□□□ -0.78
LSM5-202ENST00000409292 CDC37L1Q7L3B6 337 aa10.15□□□□□ -0.78
LSM5-202ENST00000409292 SPNS2Q8IVW8 549 aa10.15□□□□□ -0.78
LSM5-202ENST00000409292 ZNF34Q8IZ26 560 aa10.15□□□□□ -0.78
LSM5-202ENST00000409292 HHIPL1Q96JK4 782 aa10.15□□□□□ -0.78
LSM5-202ENST00000409292 ZNF408Q9H9D4 720 aa10.15□□□□□ -0.78
LSM5-202ENST00000409292 TSPYL4Q9UJ04 414 aa10.15□□□□□ -0.78
LSM5-202ENST00000409292 GMPSP49915 693 aaPredicted RBP10.14□□□□□ -0.79
LSM5-202ENST00000409292 NOGQ13253 232 aa10.14□□□□□ -0.79
LSM5-202ENST00000409292 SP8Q8IXZ3 490 aa10.14□□□□□ -0.79
LSM5-202ENST00000409292 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
LSM5-202ENST00000409292 KRTAP3-2Q9BYR7 98 aa10.14□□□□□ -0.79
LSM5-202ENST00000409292 LAMB4A4D0S4 1761 aa10.14□□□□□ -0.79
LSM5-202ENST00000409292 ADAMTSL1Q8N6G6 1762 aa10.14□□□□□ -0.79
LSM5-202ENST00000409292 TRAF5O00463 557 aa10.13□□□□□ -0.79
LSM5-202ENST00000409292 NTSR2O95665 410 aa10.13□□□□□ -0.79
LSM5-202ENST00000409292 EIF2S2P20042 333 aaKnown RBP10.13□□□□□ -0.79
LSM5-202ENST00000409292 BRPF1P55201 1214 aaPredicted RBP10.13□□□□□ -0.79
LSM5-202ENST00000409292 SLC10A5Q5PT55 438 aa10.13□□□□□ -0.79
LSM5-202ENST00000409292 SAPCD2Q86UD0 394 aa10.13□□□□□ -0.79
LSM5-202ENST00000409292 BABAM1Q9NWV8 329 aa10.13□□□□□ -0.79
LSM5-202ENST00000409292 UBN2Q6ZU65 1347 aa10.12□□□□□ -0.79
LSM5-202ENST00000409292 SH3TC1Q8TE82 1336 aa10.12□□□□□ -0.79
LSM5-202ENST00000409292 HSP90B1P14625 803 aaKnown RBP10.12□□□□□ -0.79
LSM5-202ENST00000409292 CXCL9Q07325 125 aa10.12□□□□□ -0.79
LSM5-202ENST00000409292 KIAA2012Q0VF49 1180 aa10.12□□□□□ -0.79
LSM5-202ENST00000409292 CST9Q5W186 159 aa10.12□□□□□ -0.79
LSM5-202ENST00000409292 EYA3Q99504 573 aa10.12□□□□□ -0.79
LSM5-202ENST00000409292 RTFDC1Q9BY42 306 aaPredicted RBP10.12□□□□□ -0.79
LSM5-202ENST00000409292 TRMT112Q9UI30 125 aaKnown RBP10.12□□□□□ -0.79
LSM5-202ENST00000409292 NUP98P52948 1817 aa10.12□□□□□ -0.79
LSM5-202ENST00000409292 ABCC4O15439 1325 aa10.11□□□□□ -0.79
LSM5-202ENST00000409292 TRPM7Q96QT4 1865 aa10.11□□□□□ -0.79
LSM5-202ENST00000409292 DGKZQ13574 1117 aa10.11□□□□□ -0.79
LSM5-202ENST00000409292 GRAPQ13588 217 aa10.11□□□□□ -0.79
LSM5-202ENST00000409292 ZNF687Q8N1G0 1237 aa10.11□□□□□ -0.79
LSM5-202ENST00000409292 C2orf69Q8N8R5 385 aa10.11□□□□□ -0.79
LSM5-202ENST00000409292 GRAPLQ8TC17 118 aaPredicted RBP10.11□□□□□ -0.79
LSM5-202ENST00000409292 CCDC102AQ96A19 550 aa10.11□□□□□ -0.79
LSM5-202ENST00000409292 DCPSQ96C86 337 aaKnown RBP10.11□□□□□ -0.79
LSM5-202ENST00000409292 GLIS2Q9BZE0 524 aaPredicted RBP10.11□□□□□ -0.79
LSM5-202ENST00000409292 CNOT7Q9UIV1 285 aaKnown RBP10.11□□□□□ -0.79
LSM5-202ENST00000409292 SNED1Q8TER0 1413 aa10.1□□□□□ -0.79
LSM5-202ENST00000409292 ZNF316A6NFI3 1004 aaPredicted RBP10.1□□□□□ -0.79
LSM5-202ENST00000409292 AOC2O75106 756 aa10.1□□□□□ -0.79
LSM5-202ENST00000409292 RAD17O75943 681 aa10.1□□□□□ -0.79
LSM5-202ENST00000409292 HUNKP57058 714 aa10.1□□□□□ -0.79
LSM5-202ENST00000409292 AIMP1Q12904 312 aaKnown RBP10.1□□□□□ -0.79
LSM5-202ENST00000409292 MMRN1Q13201 1228 aa10.1□□□□□ -0.79
LSM5-202ENST00000409292 WASHC4Q2M389 1173 aa10.1□□□□□ -0.79
LSM5-202ENST00000409292 GPHNQ9NQX3 736 aaPredicted RBP10.1□□□□□ -0.79
LSM5-202ENST00000409292 PGAP2Q9UHJ9 254 aa10.1□□□□□ -0.79
LSM5-202ENST00000409292 PCNTO95613 3336 aa10.09□□□□□ -0.79
LSM5-202ENST00000409292 C6orf229H3BNL8 230 aa10.09□□□□□ -0.79
LSM5-202ENST00000409292 HCLS1P14317 486 aaPredicted RBP10.09□□□□□ -0.79
LSM5-202ENST00000409292 RPS12P25398 132 aaKnown RBP10.09□□□□□ -0.79
LSM5-202ENST00000409292 RGS19P49795 217 aa10.09□□□□□ -0.79
LSM5-202ENST00000409292 RIPK4P57078 832 aa10.09□□□□□ -0.79
LSM5-202ENST00000409292 FOXK1P85037 733 aa10.09□□□□□ -0.79
LSM5-202ENST00000409292 FMR1Q06787 632 aaKnown RBP eCLIP10.09□□□□□ -0.79
LSM5-202ENST00000409292 NLRP10Q86W26 655 aa10.09□□□□□ -0.79
LSM5-202ENST00000409292 DPF2Q92785 391 aa10.09□□□□□ -0.79
LSM5-202ENST00000409292 THUMPD2Q9BTF0 503 aaKnown RBP10.09□□□□□ -0.79
LSM5-202ENST00000409292 MCOLN1Q9GZU1 580 aa10.09□□□□□ -0.79
LSM5-202ENST00000409292 TSKSQ9UJT2 592 aa10.09□□□□□ -0.79
LSM5-202ENST00000409292 NSFL1CQ9UNZ2 370 aaKnown RBP10.09□□□□□ -0.79
LSM5-202ENST00000409292 PCDHGA4Q9Y5G9 962 aa10.09□□□□□ -0.79
LSM5-202ENST00000409292 TCIRG1Q13488 830 aa10.08□□□□□ -0.8
LSM5-202ENST00000409292 RGMBQ6NW40 437 aa10.08□□□□□ -0.8
LSM5-202ENST00000409292 COPS6Q7L5N1 327 aa10.08□□□□□ -0.8
LSM5-202ENST00000409292 KRT26Q7Z3Y9 468 aa10.08□□□□□ -0.8
LSM5-202ENST00000409292 USP48Q86UV5 1035 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms