RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 ZBTB43O43298 467 aa16.36■□□□□ 0.21
ITGA6-202ENST00000409080 C20orf194Q5TEA3 1177 aa16.36■□□□□ 0.21
ITGA6-202ENST00000409080 PUM3Q15397 648 aaKnown RBP16.35■□□□□ 0.21
ITGA6-202ENST00000409080 ORC3Q9UBD5 711 aaPredicted RBP16.35■□□□□ 0.21
ITGA6-202ENST00000409080 WDR66Q8TBY9 1149 aa16.35■□□□□ 0.21
ITGA6-202ENST00000409080 HSP90AA2PQ14568 343 aaPredicted RBP16.35■□□□□ 0.21
ITGA6-202ENST00000409080 GPR162Q16538 588 aa16.35■□□□□ 0.21
ITGA6-202ENST00000409080 SMARCC2Q8TAQ2 1214 aa16.35■□□□□ 0.21
ITGA6-202ENST00000409080 CCT2P78371 535 aaKnown RBP16.35■□□□□ 0.21
ITGA6-202ENST00000409080 ITGA6P23229 1130 aa16.34■□□□□ 0.21
ITGA6-202ENST00000409080 DNAJC10Q8IXB1 793 aa16.34■□□□□ 0.21
ITGA6-202ENST00000409080 HELBQ8NG08 1087 aaPredicted RBP16.34■□□□□ 0.21
ITGA6-202ENST00000409080 SLC26A6Q9BXS9 759 aa16.34■□□□□ 0.21
ITGA6-202ENST00000409080 RTN1Q16799 776 aa16.34■□□□□ 0.21
ITGA6-202ENST00000409080 VPS36Q86VN1 386 aa16.34■□□□□ 0.21
ITGA6-202ENST00000409080 FAM89AQ96GI7 184 aa16.34■□□□□ 0.21
ITGA6-202ENST00000409080 TMOD4Q9NZQ9 345 aa16.34■□□□□ 0.21
ITGA6-202ENST00000409080 EYA2O00167 538 aa16.33■□□□□ 0.21
ITGA6-202ENST00000409080 UBA7P41226 1012 aa16.33■□□□□ 0.21
ITGA6-202ENST00000409080 FERMT3Q86UX7 667 aa16.33■□□□□ 0.21
ITGA6-202ENST00000409080 DRC1Q96MC2 740 aa16.33■□□□□ 0.21
ITGA6-202ENST00000409080 MAP3K11Q16584 847 aa16.33■□□□□ 0.21
ITGA6-202ENST00000409080 MAGEB6Q8N7X4 407 aa16.33■□□□□ 0.21
ITGA6-202ENST00000409080 PLS1Q14651 629 aa16.33■□□□□ 0.2
ITGA6-202ENST00000409080 NLGN1Q8N2Q7 840 aa16.33■□□□□ 0.2
ITGA6-202ENST00000409080 MAGI3Q5TCQ9 1506 aa16.33■□□□□ 0.2
ITGA6-202ENST00000409080 DPY19L2Q6NUT2 758 aa16.32■□□□□ 0.2
ITGA6-202ENST00000409080 PDE1AP54750 535 aa16.32■□□□□ 0.2
ITGA6-202ENST00000409080 NUCB1Q02818 461 aa16.32■□□□□ 0.2
ITGA6-202ENST00000409080 CKAP2LQ8IYA6 745 aa16.32■□□□□ 0.2
ITGA6-202ENST00000409080 CARD10Q9BWT7 1032 aa16.32■□□□□ 0.2
ITGA6-202ENST00000409080 CTAGE5O15320 804 aa16.32■□□□□ 0.2
ITGA6-202ENST00000409080 TEX11Q8IYF3 940 aa16.32■□□□□ 0.2
ITGA6-202ENST00000409080 TBC1D22AQ8WUA7 517 aa16.32■□□□□ 0.2
ITGA6-202ENST00000409080 KLF18A0A0U1RQI7 1052 aa16.32■□□□□ 0.2
ITGA6-202ENST00000409080 HSP90B2PQ58FF3 399 aa16.32■□□□□ 0.2
ITGA6-202ENST00000409080 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.32■□□□□ 0.2
ITGA6-202ENST00000409080 C6orf50Q9HD87 102 aa16.32■□□□□ 0.2
ITGA6-202ENST00000409080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.32■□□□□ 0.28e-7■■□□□ 12.4
ITGA6-202ENST00000409080 ERVK-7P63135 1459 aa16.32■□□□□ 0.2
ITGA6-202ENST00000409080 TFCP2Q12800 502 aa16.32■□□□□ 0.2
ITGA6-202ENST00000409080 BICC1Q9H694 974 aaKnown RBP16.32■□□□□ 0.2
ITGA6-202ENST00000409080 TBCAO75347 108 aaKnown RBP16.31■□□□□ 0.2
ITGA6-202ENST00000409080 HCLS1P14317 486 aaPredicted RBP16.31■□□□□ 0.2
ITGA6-202ENST00000409080 KANK3Q6NY19 840 aa16.31■□□□□ 0.2
ITGA6-202ENST00000409080 RRP36Q96EU6 259 aaKnown RBP16.31■□□□□ 0.2
ITGA6-202ENST00000409080 CCDC144CPQ8IYA2 1237 aa16.31■□□□□ 0.2
ITGA6-202ENST00000409080 MBD5Q9P267 1494 aa16.31■□□□□ 0.2
ITGA6-202ENST00000409080 CCDC181Q5TID7 509 aa16.31■□□□□ 0.2
ITGA6-202ENST00000409080 USP37Q86T82 979 aa16.31■□□□□ 0.2
ITGA6-202ENST00000409080 PA2G4Q9UQ80 394 aaKnown RBP16.31■□□□□ 0.2
ITGA6-202ENST00000409080 SPDYE3A6NKU9 549 aa16.31■□□□□ 0.2
ITGA6-202ENST00000409080 MPNDQ8N594 471 aa16.31■□□□□ 0.2
ITGA6-202ENST00000409080 H7C1D1 291 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 GUCY1B3Q02153 619 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 KRT27Q7Z3Y8 459 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 ARHGEF10LQ9HCE6 1279 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 ANO10Q9NW15 660 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 ERBB4Q15303 1308 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 RAD50Q92878 1312 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 CALML3P27482 149 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 TBC1D9Q6ZT07 1266 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 CNKSR1Q969H4 720 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 MROH5Q6ZUA9 1318 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 A1BGP04217 495 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 PHKG2P15735 406 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 TNNT3P45378 269 aaPredicted RBP16.3■□□□□ 0.2
ITGA6-202ENST00000409080 BIN2Q9UBW5 565 aaPredicted RBP16.3■□□□□ 0.2
ITGA6-202ENST00000409080 INSRP06213 1382 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 RBM25P49756 843 aaKnown RBP16.3■□□□□ 0.2
ITGA6-202ENST00000409080 NCBP1Q09161 790 aaKnown RBP16.3■□□□□ 0.2
ITGA6-202ENST00000409080 TCIRG1Q13488 830 aa16.3■□□□□ 0.2
ITGA6-202ENST00000409080 LIG1P18858 919 aa16.29■□□□□ 0.2
ITGA6-202ENST00000409080 NAPAP54920 295 aa16.29■□□□□ 0.2
ITGA6-202ENST00000409080 JAKMIP3Q5VZ66 844 aa16.29■□□□□ 0.2
ITGA6-202ENST00000409080 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
ITGA6-202ENST00000409080 CNNM3Q8NE01 707 aa16.29■□□□□ 0.2
ITGA6-202ENST00000409080 SYCP3Q8IZU3 236 aa16.29■□□□□ 0.2
ITGA6-202ENST00000409080 ARID3AQ99856 593 aa16.29■□□□□ 0.2
ITGA6-202ENST00000409080 LGR6Q9HBX8 967 aa16.29■□□□□ 0.2
ITGA6-202ENST00000409080 TEX35Q5T0J7 233 aa16.29■□□□□ 0.2
ITGA6-202ENST00000409080 NAP1L4Q99733 375 aaKnown RBP16.29■□□□□ 0.2
ITGA6-202ENST00000409080 RTL1A6NKG5 1358 aa16.29■□□□□ 0.2
ITGA6-202ENST00000409080 BRDTQ58F21 947 aaPredicted RBP16.28■□□□□ 0.2
ITGA6-202ENST00000409080 BCS1LQ9Y276 419 aa16.28■□□□□ 0.2
ITGA6-202ENST00000409080 PREX2Q70Z35 1606 aa16.28■□□□□ 0.2
ITGA6-202ENST00000409080 CFAP65Q6ZU64 1925 aaKnown RBP16.28■□□□□ 0.2
ITGA6-202ENST00000409080 PTPRTO14522 1441 aa16.28■□□□□ 0.2
ITGA6-202ENST00000409080 CHL1O00533 1208 aa16.28■□□□□ 0.2
ITGA6-202ENST00000409080 ANAPC15P60006 121 aa16.28■□□□□ 0.2
ITGA6-202ENST00000409080 TNFAIP1Q13829 316 aa16.28■□□□□ 0.2
ITGA6-202ENST00000409080 IQCEQ6IPM2 695 aa16.28■□□□□ 0.2
ITGA6-202ENST00000409080 TSPYL6Q8N831 410 aa16.28■□□□□ 0.2
ITGA6-202ENST00000409080 TTC37Q6PGP7 1564 aa16.28■□□□□ 0.2
ITGA6-202ENST00000409080 PPIP5K2O43314 1243 aa16.27■□□□□ 0.2
ITGA6-202ENST00000409080 CACNA2D4Q7Z3S7 1137 aa16.27■□□□□ 0.2
ITGA6-202ENST00000409080 MIGA1Q8NAN2 632 aa16.27■□□□□ 0.2
ITGA6-202ENST00000409080 ZSCAN16Q9H4T2 348 aaPredicted RBP16.27■□□□□ 0.2
ITGA6-202ENST00000409080 THRAP3Q9Y2W1 955 aaKnown RBP16.27■□□□□ 0.2
ITGA6-202ENST00000409080 RBM8AQ9Y5S9 174 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms