RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 CT47A1Q5JQC4 288 aaPredicted RBP19.28■□□□□ 0.68
CDK11B-204ENST00000407249 TTC5Q8N0Z6 440 aa19.28■□□□□ 0.68
CDK11B-204ENST00000407249 MAP3K2Q9Y2U5 619 aa19.28■□□□□ 0.68
CDK11B-204ENST00000407249 LAMB4A4D0S4 1761 aa19.28■□□□□ 0.68
CDK11B-204ENST00000407249 NBPF11Q86T75 865 aa19.28■□□□□ 0.68
CDK11B-204ENST00000407249 GOLGA6L6A8MZA4 724 aa19.27■□□□□ 0.68
CDK11B-204ENST00000407249 SPC24Q8NBT2 197 aa19.27■□□□□ 0.68
CDK11B-204ENST00000407249 NFATC2IPQ8NCF5 419 aa19.27■□□□□ 0.68
CDK11B-204ENST00000407249 LINS1Q8NG48 757 aa19.27■□□□□ 0.68
CDK11B-204ENST00000407249 NECTIN1Q15223 517 aa19.27■□□□□ 0.67
CDK11B-204ENST00000407249 FAM200AQ8TCP9 573 aa19.27■□□□□ 0.67
CDK11B-204ENST00000407249 SNRPA1P09661 255 aaKnown RBP19.26■□□□□ 0.67
CDK11B-204ENST00000407249 TTC6Q86TZ1 520 aa19.26■□□□□ 0.67
CDK11B-204ENST00000407249 FMNL2Q96PY5 1086 aa19.26■□□□□ 0.67
CDK11B-204ENST00000407249 CHAF1AQ13111 956 aaPredicted RBP19.26■□□□□ 0.67
CDK11B-204ENST00000407249 UTYO14607 1347 aa19.25■□□□□ 0.67
CDK11B-204ENST00000407249 GOLIM4O00461 696 aa19.25■□□□□ 0.67
CDK11B-204ENST00000407249 ANXA1P04083 346 aa19.25■□□□□ 0.67
CDK11B-204ENST00000407249 PDIA6Q15084 440 aa19.25■□□□□ 0.67
CDK11B-204ENST00000407249 PROSER3Q2NL68 480 aa19.25■□□□□ 0.67
CDK11B-204ENST00000407249 CLASRPQ8N2M8 674 aaKnown RBP19.25■□□□□ 0.67
CDK11B-204ENST00000407249 GPATCH11Q8N954 259 aa19.25■□□□□ 0.67
CDK11B-204ENST00000407249 NECAB1Q8N987 351 aa19.25■□□□□ 0.67
CDK11B-204ENST00000407249 ECHDC1Q9NTX5 307 aa19.25■□□□□ 0.67
CDK11B-204ENST00000407249 RIOK3O14730 519 aaKnown RBP19.25■□□□□ 0.67
CDK11B-204ENST00000407249 CABP4P57796 275 aa19.25■□□□□ 0.67
CDK11B-204ENST00000407249 KRT85P78386 507 aa19.25■□□□□ 0.67
CDK11B-204ENST00000407249 MAP2K1Q02750 393 aaPredicted RBP19.25■□□□□ 0.67
CDK11B-204ENST00000407249 TOM1L2Q6ZVM7 507 aa19.25■□□□□ 0.67
CDK11B-204ENST00000407249 ELP1O95163 1332 aa19.24■□□□□ 0.67
CDK11B-204ENST00000407249 ZKSCAN1P17029 563 aaPredicted RBP19.24■□□□□ 0.67
CDK11B-204ENST00000407249 MAP3K11Q16584 847 aa19.24■□□□□ 0.67
CDK11B-204ENST00000407249 LARP1BQ659C4 914 aaKnown RBP19.24■□□□□ 0.67
CDK11B-204ENST00000407249 LARP1Q6PKG0 1096 aaKnown RBP19.24■□□□□ 0.67
CDK11B-204ENST00000407249 NCAPGQ9BPX3 1015 aa19.24■□□□□ 0.67
CDK11B-204ENST00000407249 C9orf78Q9NZ63 289 aaPredicted RBP19.24■□□□□ 0.67
CDK11B-204ENST00000407249 TPCN1Q9ULQ1 816 aa19.24■□□□□ 0.67
CDK11B-204ENST00000407249 ZCRB1Q8TBF4 217 aaKnown RBP19.24■□□□□ 0.67
CDK11B-204ENST00000407249 MRVI1Q9Y6F6 885 aa19.24■□□□□ 0.67
CDK11B-204ENST00000407249 CCDC172P0C7W6 258 aa19.23■□□□□ 0.67
CDK11B-204ENST00000407249 GABPB1Q06547 395 aaPredicted RBP19.23■□□□□ 0.67
CDK11B-204ENST00000407249 NUP62CLQ9H1M0 184 aa19.23■□□□□ 0.67
CDK11B-204ENST00000407249 CCDC171Q6TFL3 1326 aa19.23■□□□□ 0.67
CDK11B-204ENST00000407249 PRAMEF22A3QJZ6 481 aa19.23■□□□□ 0.67
CDK11B-204ENST00000407249 TTC36A6NLP5 189 aa19.23■□□□□ 0.67
CDK11B-204ENST00000407249 ERVV-2B6SEH9 535 aa19.23■□□□□ 0.67
CDK11B-204ENST00000407249 TYRO3Q06418 890 aa19.23■□□□□ 0.67
CDK11B-204ENST00000407249 SLC39A6Q13433 755 aa19.23■□□□□ 0.67
CDK11B-204ENST00000407249 DDX54Q8TDD1 881 aaKnown RBP19.23■□□□□ 0.67
CDK11B-204ENST00000407249 RAI14Q9P0K7 980 aa19.23■□□□□ 0.67
CDK11B-204ENST00000407249 GLI3P10071 1580 aa19.22■□□□□ 0.67
CDK11B-204ENST00000407249 CTIFO43310 598 aaKnown RBP19.22■□□□□ 0.67
CDK11B-204ENST00000407249 LIG1P18858 919 aa19.22■□□□□ 0.67
CDK11B-204ENST00000407249 NKX1-1Q15270 411 aaPredicted RBP19.22■□□□□ 0.67
CDK11B-204ENST00000407249 CDC37L1Q7L3B6 337 aa19.22■□□□□ 0.67
CDK11B-204ENST00000407249 ZNF496Q96IT1 587 aaPredicted RBP19.22■□□□□ 0.67
CDK11B-204ENST00000407249 PAPPAQ13219 1627 aa19.22■□□□□ 0.67
CDK11B-204ENST00000407249 NEXNQ0ZGT2 675 aa19.22■□□□□ 0.67
CDK11B-204ENST00000407249 CAMK4Q16566 473 aa19.22■□□□□ 0.67
CDK11B-204ENST00000407249 LUZP1Q86V48 1076 aa19.22■□□□□ 0.67
CDK11B-204ENST00000407249 RNF217Q8TC41 542 aa19.22■□□□□ 0.67
CDK11B-204ENST00000407249 ANKRD7Q92527 254 aa19.22■□□□□ 0.67
CDK11B-204ENST00000407249 EVI5LQ96CN4 794 aa19.22■□□□□ 0.67
CDK11B-204ENST00000407249 CALCOCO1Q9P1Z2 691 aa19.22■□□□□ 0.67
CDK11B-204ENST00000407249 IL2RBP14784 551 aa19.21■□□□□ 0.67
CDK11B-204ENST00000407249 PTGS1P23219 599 aa19.21■□□□□ 0.67
CDK11B-204ENST00000407249 CREB3L3Q68CJ9 461 aa19.21■□□□□ 0.67
CDK11B-204ENST00000407249 FERMT3Q86UX7 667 aa19.21■□□□□ 0.67
CDK11B-204ENST00000407249 PDCL2Q8N4E4 241 aa19.21■□□□□ 0.67
CDK11B-204ENST00000407249 RBM8AQ9Y5S9 174 aaKnown RBP19.21■□□□□ 0.67
CDK11B-204ENST00000407249 UBR2Q8IWV8 1755 aa19.21■□□□□ 0.67
CDK11B-204ENST00000407249 ERC1Q8IUD2 1116 aa19.21■□□□□ 0.67
CDK11B-204ENST00000407249 MAP4K1Q92918 833 aa19.21■□□□□ 0.67
CDK11B-204ENST00000407249 GPATCH3Q96I76 525 aa19.21■□□□□ 0.67
CDK11B-204ENST00000407249 CHMP3Q9Y3E7 222 aa19.21■□□□□ 0.67
CDK11B-204ENST00000407249 GRM8O00222 908 aa19.2■□□□□ 0.66
CDK11B-204ENST00000407249 PDCP20941 246 aa19.2■□□□□ 0.66
CDK11B-204ENST00000407249 FAM173BQ6P4H8 233 aa19.2■□□□□ 0.66
CDK11B-204ENST00000407249 IFIT2P09913 472 aaKnown RBP19.2■□□□□ 0.66
CDK11B-204ENST00000407249 RIC3Q7Z5B4 369 aa19.2■□□□□ 0.66
CDK11B-204ENST00000407249 COL9A3Q14050 684 aaPredicted RBP19.19■□□□□ 0.66
CDK11B-204ENST00000407249 SHANK3Q9BYB0 1731 aa19.19■□□□□ 0.66
CDK11B-204ENST00000407249 TNMDQ9H2S6 317 aa19.19■□□□□ 0.66
CDK11B-204ENST00000407249 DACT1Q9NYF0 836 aa19.19■□□□□ 0.66
CDK11B-204ENST00000407249 PSMA5P28066 241 aa19.18■□□□□ 0.66
CDK11B-204ENST00000407249 METTL22Q9BUU2 404 aaPredicted RBP19.18■□□□□ 0.66
CDK11B-204ENST00000407249 SCAND2PQ9GZW5 306 aaPredicted RBP19.18■□□□□ 0.66
CDK11B-204ENST00000407249 CBX8Q9HC52 389 aa19.18■□□□□ 0.66
CDK11B-204ENST00000407249 GTF2A1P52655 376 aaPredicted RBP19.18■□□□□ 0.66
CDK11B-204ENST00000407249 NBPF9Q3BBW0 867 aa19.18■□□□□ 0.66
CDK11B-204ENST00000407249 RBM43Q6ZSC3 357 aaKnown RBP19.18■□□□□ 0.66
CDK11B-204ENST00000407249 CCDC186Q7Z3E2 898 aa19.18■□□□□ 0.66
CDK11B-204ENST00000407249 CKAP2LQ8IYA6 745 aa19.18■□□□□ 0.66
CDK11B-204ENST00000407249 FAM227BQ96M60 508 aa19.18■□□□□ 0.66
CDK11B-204ENST00000407249 FEZ2Q9UHY8 353 aaPredicted RBP19.18■□□□□ 0.66
CDK11B-204ENST00000407249 SLC27A2O14975 620 aa19.18■□□□□ 0.66
CDK11B-204ENST00000407249 ANO6Q4KMQ2 910 aa19.18■□□□□ 0.66
CDK11B-204ENST00000407249 COL15A1P39059 1388 aa19.17■□□□□ 0.66
CDK11B-204ENST00000407249 TNNT3P45378 269 aaPredicted RBP19.17■□□□□ 0.66
CDK11B-204ENST00000407249 XAGE3Q8WTP9 111 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms