RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 SNW1Q13573 536 aaKnown RBP18.24■□□□□ 0.51
ATG4B-205ENST00000404914 CCDC129Q6ZRS4 1044 aa18.24■□□□□ 0.51
ATG4B-205ENST00000404914 CCAR1Q8IX12 1150 aaKnown RBP18.24■□□□□ 0.51
ATG4B-205ENST00000404914 GPATCH3Q96I76 525 aa18.24■□□□□ 0.51
ATG4B-205ENST00000404914 SUCLG2Q96I99 432 aa18.24■□□□□ 0.51
ATG4B-205ENST00000404914 NBPF11Q86T75 865 aa18.23■□□□□ 0.51
ATG4B-205ENST00000404914 SNRKQ9NRH2 765 aa18.23■□□□□ 0.51
ATG4B-205ENST00000404914 TAF5LO75529 589 aa18.22■□□□□ 0.51
ATG4B-205ENST00000404914 ANKRD1Q15327 319 aa18.22■□□□□ 0.51
ATG4B-205ENST00000404914 Q6ZUG5 572 aa18.22■□□□□ 0.51
ATG4B-205ENST00000404914 SEC62Q99442 399 aaKnown RBP18.22■□□□□ 0.51
ATG4B-205ENST00000404914 H3BQV1 296 aa18.22■□□□□ 0.51
ATG4B-205ENST00000404914 SCRN1Q12765 414 aa18.22■□□□□ 0.51
ATG4B-205ENST00000404914 ERCC6LQ2NKX8 1250 aa18.22■□□□□ 0.51
ATG4B-205ENST00000404914 IFFO2Q5TF58 517 aa18.22■□□□□ 0.51
ATG4B-205ENST00000404914 AOPEPQ8N6M6 819 aa18.22■□□□□ 0.51
ATG4B-205ENST00000404914 BICC1Q9H694 974 aaKnown RBP18.22■□□□□ 0.51
ATG4B-205ENST00000404914 STX1AQ16623 288 aa18.21■□□□□ 0.51
ATG4B-205ENST00000404914 ERO1AQ96HE7 468 aa18.21■□□□□ 0.51
ATG4B-205ENST00000404914 USP28Q96RU2 1077 aa18.21■□□□□ 0.51
ATG4B-205ENST00000404914 PHF8Q9UPP1 1060 aa18.21■□□□□ 0.51
ATG4B-205ENST00000404914 CEMIPQ8WUJ3 1361 aa18.21■□□□□ 0.51
ATG4B-205ENST00000404914 BABAM1Q9NWV8 329 aa18.21■□□□□ 0.51
ATG4B-205ENST00000404914 DCCP43146 1447 aa18.21■□□□□ 0.51
ATG4B-205ENST00000404914 GIGYF1O75420 1035 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-205ENST00000404914 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
ATG4B-205ENST00000404914 RNF20Q5VTR2 975 aa18.2■□□□□ 0.5
ATG4B-205ENST00000404914 E4F1Q66K89 784 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-205ENST00000404914 CADPS2Q86UW7 1296 aa18.2■□□□□ 0.5
ATG4B-205ENST00000404914 ALDH8A1Q9H2A2 487 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-205ENST00000404914 BECN2A8MW95 431 aa18.2■□□□□ 0.5
ATG4B-205ENST00000404914 SLU7O95391 586 aaKnown RBP18.2■□□□□ 0.5
ATG4B-205ENST00000404914 GUCY1B3Q02153 619 aa18.2■□□□□ 0.5
ATG4B-205ENST00000404914 JCADQ9P266 1359 aa18.19■□□□□ 0.5
ATG4B-205ENST00000404914 ENGASEQ8NFI3 743 aa18.19■□□□□ 0.5
ATG4B-205ENST00000404914 MYH15Q9Y2K3 1946 aa18.19■□□□□ 0.5
ATG4B-205ENST00000404914 CTDNEP1O95476 244 aa18.19■□□□□ 0.5
ATG4B-205ENST00000404914 SLFNL1Q499Z3 407 aa18.19■□□□□ 0.5
ATG4B-205ENST00000404914 MARF1Q9Y4F3 1742 aaKnown RBP18.19■□□□□ 0.5
ATG4B-205ENST00000404914 VGLL3A8MV65 326 aa18.18■□□□□ 0.5
ATG4B-205ENST00000404914 IRX5P78411 483 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-205ENST00000404914 MPRIPQ6WCQ1 1025 aa18.18■□□□□ 0.5
ATG4B-205ENST00000404914 STOX1Q6ZVD7 989 aa18.18■□□□□ 0.5
ATG4B-205ENST00000404914 ERC1Q8IUD2 1116 aa18.18■□□□□ 0.5
ATG4B-205ENST00000404914 NEK1Q96PY6 1258 aa18.18■□□□□ 0.5
ATG4B-205ENST00000404914 KDM3BQ7LBC6 1761 aa18.18■□□□□ 0.5
ATG4B-205ENST00000404914 A0A0G2JLW4 131 aa18.18■□□□□ 0.5
ATG4B-205ENST00000404914 CYP21A2P08686 494 aa18.18■□□□□ 0.5
ATG4B-205ENST00000404914 SYT10Q6XYQ8 523 aa18.18■□□□□ 0.5
ATG4B-205ENST00000404914 ILDR1Q86SU0 546 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-205ENST00000404914 RCOR1Q9UKL0 485 aa18.18■□□□□ 0.5
ATG4B-205ENST00000404914 HIP1O00291 1037 aa18.17■□□□□ 0.5
ATG4B-205ENST00000404914 PDIA4P13667 645 aaKnown RBP18.17■□□□□ 0.5
ATG4B-205ENST00000404914 G3BP1Q13283 466 aaKnown RBP eCLIP18.17■□□□□ 0.5
ATG4B-205ENST00000404914 TAF3Q5VWG9 929 aa18.17■□□□□ 0.5
ATG4B-205ENST00000404914 ARMCX5Q6P1M9 558 aa18.17■□□□□ 0.5
ATG4B-205ENST00000404914 SLAIN2Q9P270 581 aa18.17■□□□□ 0.5
ATG4B-205ENST00000404914 NEMFO60524 1076 aa18.17■□□□□ 0.5
ATG4B-205ENST00000404914 TSGA10IPQ3SY00 556 aa18.17■□□□□ 0.5
ATG4B-205ENST00000404914 NBPF6Q5VWK0 638 aa18.16■□□□□ 0.5
ATG4B-205ENST00000404914 USPL1Q5W0Q7 1092 aa18.16■□□□□ 0.5
ATG4B-205ENST00000404914 PPP1R13BQ96KQ4 1090 aa18.16■□□□□ 0.5
ATG4B-205ENST00000404914 NBPF4Q96M43 638 aa18.16■□□□□ 0.5
ATG4B-205ENST00000404914 NCOA5Q9HCD5 579 aaKnown RBP18.16■□□□□ 0.5
ATG4B-205ENST00000404914 CFAP45Q9UL16 551 aa18.16■□□□□ 0.5
ATG4B-205ENST00000404914 MED1Q15648 1581 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-205ENST00000404914 BTBD11A6QL63 1104 aa18.16■□□□□ 0.5
ATG4B-205ENST00000404914 CAVIN2O95810 425 aa18.16■□□□□ 0.5
ATG4B-205ENST00000404914 H2AFXP16104 143 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-205ENST00000404914 CCT2P78371 535 aaKnown RBP18.16■□□□□ 0.5
ATG4B-205ENST00000404914 FSIP1Q8NA03 581 aa18.16■□□□□ 0.5
ATG4B-205ENST00000404914 NSUN7Q8NE18 718 aaKnown RBP18.16■□□□□ 0.5
ATG4B-205ENST00000404914 SMARCC2Q8TAQ2 1214 aa18.16■□□□□ 0.5
ATG4B-205ENST00000404914 FHOD1Q9Y613 1164 aa18.16■□□□□ 0.5
ATG4B-205ENST00000404914 CLCN6P51797 869 aa18.16■□□□□ 0.5
ATG4B-205ENST00000404914 AIMP1Q12904 312 aaKnown RBP18.16■□□□□ 0.5
ATG4B-205ENST00000404914 EPHA10Q5JZY3 1008 aa18.16■□□□□ 0.5
ATG4B-205ENST00000404914 GRM8O00222 908 aa18.15■□□□□ 0.5
ATG4B-205ENST00000404914 DPCR1Q3MIW9 517 aa18.15■□□□□ 0.5
ATG4B-205ENST00000404914 KSR2Q6VAB6 950 aa18.15■□□□□ 0.5
ATG4B-205ENST00000404914 BRINP3Q76B58 766 aa18.15■□□□□ 0.5
ATG4B-205ENST00000404914 TRERF1Q96PN7 1200 aa18.15■□□□□ 0.5
ATG4B-205ENST00000404914 ZSCAN16Q9H4T2 348 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-205ENST00000404914 ZNF609O15014 1411 aa18.15■□□□□ 0.5
ATG4B-205ENST00000404914 FANCGO15287 622 aa18.15■□□□□ 0.5
ATG4B-205ENST00000404914 APOBRQ0VD83 1088 aa18.15■□□□□ 0.5
ATG4B-205ENST00000404914 XPO4Q9C0E2 1151 aaKnown RBP18.15■□□□□ 0.5
ATG4B-205ENST00000404914 L2HGDHQ9H9P8 463 aa18.15■□□□□ 0.5
ATG4B-205ENST00000404914 HMG20BQ9P0W2 317 aa18.15■□□□□ 0.5
ATG4B-205ENST00000404914 DBF4Q9UBU7 674 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-205ENST00000404914 A0A1B0GVL5 298 aa18.14■□□□□ 0.49
ATG4B-205ENST00000404914 KINO60870 393 aaKnown RBP18.14■□□□□ 0.49
ATG4B-205ENST00000404914 ALDH1L1O75891 902 aa18.14■□□□□ 0.49
ATG4B-205ENST00000404914 GORABQ5T7V8 394 aa18.14■□□□□ 0.49
ATG4B-205ENST00000404914 CCDC73Q6ZRK6 1079 aa18.14■□□□□ 0.49
ATG4B-205ENST00000404914 ANO10Q9NW15 660 aa18.14■□□□□ 0.49
ATG4B-205ENST00000404914 LAMA4Q16363 1823 aa18.14■□□□□ 0.49
ATG4B-205ENST00000404914 MAPK8IP2Q13387 824 aaPredicted RBP18.14■□□□□ 0.49
ATG4B-205ENST00000404914 CCDC93Q567U6 631 aa18.14■□□□□ 0.49
ATG4B-205ENST00000404914 TMC6Q7Z403 805 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms