RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 ITGA6P23229 1130 aa19.62■□□□□ 0.73
ATG4B-202ENST00000400771 EPHX2P34913 555 aa19.62■□□□□ 0.73
ATG4B-202ENST00000400771 GJA3Q9Y6H8 435 aa19.62■□□□□ 0.73
ATG4B-202ENST00000400771 ZNF609O15014 1411 aa19.61■□□□□ 0.73
ATG4B-202ENST00000400771 POLR2AP24928 1970 aaKnown RBP19.61■□□□□ 0.73
ATG4B-202ENST00000400771 WTIPA6NIX2 430 aaPredicted RBP19.61■□□□□ 0.73
ATG4B-202ENST00000400771 UFL1O94874 794 aa19.61■□□□□ 0.73
ATG4B-202ENST00000400771 CT47B1P0C2W7 299 aaPredicted RBP19.61■□□□□ 0.73
ATG4B-202ENST00000400771 APLP1P51693 650 aa19.61■□□□□ 0.73
ATG4B-202ENST00000400771 WASHC4Q2M389 1173 aa19.61■□□□□ 0.73
ATG4B-202ENST00000400771 SLC4A10Q6U841 1118 aa19.61■□□□□ 0.73
ATG4B-202ENST00000400771 KAZALD1Q96I82 304 aa19.61■□□□□ 0.73
ATG4B-202ENST00000400771 SRCIN1Q9C0H9 1055 aa19.61■□□□□ 0.73
ATG4B-202ENST00000400771 DBNDD1Q9H9R9 158 aa19.61■□□□□ 0.73
ATG4B-202ENST00000400771 BSDC1Q9NW68 430 aaPredicted RBP19.61■□□□□ 0.73
ATG4B-202ENST00000400771 C6orf229H3BNL8 230 aa19.6■□□□□ 0.73
ATG4B-202ENST00000400771 CHADLQ6NUI6 762 aa19.6■□□□□ 0.73
ATG4B-202ENST00000400771 LDHDQ86WU2 507 aa19.6■□□□□ 0.73
ATG4B-202ENST00000400771 MINPP1Q9UNW1 487 aa19.6■□□□□ 0.73
ATG4B-202ENST00000400771 MED23Q9ULK4 1368 aa19.59■□□□□ 0.73
ATG4B-202ENST00000400771 RIMBP2O15034 1052 aa19.59■□□□□ 0.73
ATG4B-202ENST00000400771 ECE2O60344 883 aa19.59■□□□□ 0.73
ATG4B-202ENST00000400771 RAD17O75943 681 aa19.59■□□□□ 0.73
ATG4B-202ENST00000400771 EPS15P42566 896 aa19.59■□□□□ 0.73
ATG4B-202ENST00000400771 BRPF1P55201 1214 aaPredicted RBP19.59■□□□□ 0.73
ATG4B-202ENST00000400771 HTRA3P83110 453 aa19.59■□□□□ 0.73
ATG4B-202ENST00000400771 SUCLG2Q96I99 432 aa19.59■□□□□ 0.73
ATG4B-202ENST00000400771 SMC4Q9NTJ3 1288 aa19.59■□□□□ 0.73
ATG4B-202ENST00000400771 GGA1Q9UJY5 639 aa19.59■□□□□ 0.73
ATG4B-202ENST00000400771 PASKQ96RG2 1323 aa19.58■□□□□ 0.73
ATG4B-202ENST00000400771 NBPF7P0C2Y1 421 aaPredicted RBP19.58■□□□□ 0.72
ATG4B-202ENST00000400771 GMPSP49915 693 aaPredicted RBP19.58■□□□□ 0.72
ATG4B-202ENST00000400771 CIAPIN1Q6FI81 312 aa19.58■□□□□ 0.72
ATG4B-202ENST00000400771 EYA3Q99504 573 aa19.58■□□□□ 0.72
ATG4B-202ENST00000400771 GPRC5DQ9NZD1 345 aa19.58■□□□□ 0.72
ATG4B-202ENST00000400771 ANKIB1Q9P2G1 1089 aa19.58■□□□□ 0.72
ATG4B-202ENST00000400771 KCNQ5Q9NR82 932 aa19.57■□□□□ 0.72
ATG4B-202ENST00000400771 IRS2Q9Y4H2 1338 aa19.56■□□□□ 0.72
ATG4B-202ENST00000400771 SHTN1A0MZ66 631 aa19.56■□□□□ 0.72
ATG4B-202ENST00000400771 PSMD14O00487 310 aa19.56■□□□□ 0.72
ATG4B-202ENST00000400771 RARSP54136 660 aaKnown RBP19.56■□□□□ 0.72
ATG4B-202ENST00000400771 DOK7Q18PE1 504 aa19.56■□□□□ 0.72
ATG4B-202ENST00000400771 EAPPQ56P03 285 aaPredicted RBP19.56■□□□□ 0.72
ATG4B-202ENST00000400771 LMBR1LQ6UX01 489 aa19.56■□□□□ 0.72
ATG4B-202ENST00000400771 DNAJC5GQ8N7S2 189 aa19.56■□□□□ 0.72
ATG4B-202ENST00000400771 MYH13Q9UKX3 1938 aa19.56■□□□□ 0.72
ATG4B-202ENST00000400771 PCNTO95613 3336 aa19.56■□□□□ 0.72
ATG4B-202ENST00000400771 ECM29Q5VYK3 1845 aa19.55■□□□□ 0.72
ATG4B-202ENST00000400771 KLRK1P26718 216 aa19.55■□□□□ 0.72
ATG4B-202ENST00000400771 LMOD1P29536 600 aaPredicted RBP19.55■□□□□ 0.72
ATG4B-202ENST00000400771 IGHMBP2P38935 993 aaKnown RBP19.55■□□□□ 0.72
ATG4B-202ENST00000400771 CCT4P50991 539 aaKnown RBP19.55■□□□□ 0.72
ATG4B-202ENST00000400771 HNRNPUQ00839 825 aaKnown RBP eCLIP19.55■□□□□ 0.72
ATG4B-202ENST00000400771 ANKRD44Q8N8A2 993 aa19.55■□□□□ 0.72
ATG4B-202ENST00000400771 C9orf78Q9NZ63 289 aaPredicted RBP19.55■□□□□ 0.72
ATG4B-202ENST00000400771 THSD7BQ9C0I4 1608 aa19.54■□□□□ 0.72
ATG4B-202ENST00000400771 ANKRD18BA2A2Z9 1011 aa19.54■□□□□ 0.72
ATG4B-202ENST00000400771 ITGBL1O95965 494 aaPredicted RBP19.54■□□□□ 0.72
ATG4B-202ENST00000400771 ATP2B4P23634 1241 aa19.54■□□□□ 0.72
ATG4B-202ENST00000400771 RABL6Q3YEC7 729 aaPredicted RBP19.54■□□□□ 0.72
ATG4B-202ENST00000400771 PNMA8AQ86V59 439 aaPredicted RBP19.54■□□□□ 0.72
ATG4B-202ENST00000400771 TNIP1Q15025 636 aa19.53■□□□□ 0.72
ATG4B-202ENST00000400771 TXNRD3Q86VQ6 643 aa19.53■□□□□ 0.72
ATG4B-202ENST00000400771 USP44Q9H0E7 712 aa19.53■□□□□ 0.72
ATG4B-202ENST00000400771 ZBTB12Q9Y330 459 aaPredicted RBP19.53■□□□□ 0.72
ATG4B-202ENST00000400771 ZBED9Q6R2W3 1325 aa19.52■□□□□ 0.72
ATG4B-202ENST00000400771 CHRNDQ07001 517 aa19.52■□□□□ 0.72
ATG4B-202ENST00000400771 IFIT5Q13325 482 aaKnown RBP19.52■□□□□ 0.72
ATG4B-202ENST00000400771 TRPM4Q8TD43 1214 aa19.52■□□□□ 0.72
ATG4B-202ENST00000400771 ZNF594Q96JF6 807 aaPredicted RBP19.52■□□□□ 0.72
ATG4B-202ENST00000400771 ZC3H12CQ9C0D7 883 aaKnown RBP19.52■□□□□ 0.72
ATG4B-202ENST00000400771 BICC1Q9H694 974 aaKnown RBP19.52■□□□□ 0.72
ATG4B-202ENST00000400771 ADARB2Q9NS39 739 aaKnown RBP19.52■□□□□ 0.72
ATG4B-202ENST00000400771 NOB1Q9ULX3 412 aaKnown RBP19.52■□□□□ 0.72
ATG4B-202ENST00000400771 MAP1SQ66K74 1059 aaPredicted RBP19.51■□□□□ 0.71
ATG4B-202ENST00000400771 USP50Q70EL3 339 aaPredicted RBP19.51■□□□□ 0.71
ATG4B-202ENST00000400771 MPHOSPH8Q99549 860 aa19.51■□□□□ 0.71
ATG4B-202ENST00000400771 CHMP3Q9Y3E7 222 aa19.51■□□□□ 0.71
ATG4B-202ENST00000400771 KIF16BQ96L93 1317 aa19.51■□□□□ 0.71
ATG4B-202ENST00000400771 SNAP23O00161 211 aa19.5■□□□□ 0.71
ATG4B-202ENST00000400771 HIRAP54198 1017 aaPredicted RBP19.5■□□□□ 0.71
ATG4B-202ENST00000400771 MICALL2Q8IY33 904 aa19.5■□□□□ 0.71
ATG4B-202ENST00000400771 LEMD3Q9Y2U8 911 aa19.5■□□□□ 0.71
ATG4B-202ENST00000400771 ZNF804BA4D1E1 1349 aa19.5■□□□□ 0.71
ATG4B-202ENST00000400771 EGFRP00533 1210 aa19.49■□□□□ 0.71
ATG4B-202ENST00000400771 VIL1P09327 827 aaKnown RBP19.49■□□□□ 0.71
ATG4B-202ENST00000400771 DPF2Q92785 391 aa19.49■□□□□ 0.71
ATG4B-202ENST00000400771 ANKRD2Q9GZV1 360 aa19.49■□□□□ 0.71
ATG4B-202ENST00000400771 RPS12P25398 132 aaKnown RBP19.48■□□□□ 0.71
ATG4B-202ENST00000400771 KLRG1Q96E93 195 aa19.48■□□□□ 0.71
ATG4B-202ENST00000400771 GMLQ99445 158 aa19.48■□□□□ 0.71
ATG4B-202ENST00000400771 CNOT7Q9UIV1 285 aaKnown RBP19.48■□□□□ 0.71
ATG4B-202ENST00000400771 TNNQ9UQP3 1299 aa19.48■□□□□ 0.71
ATG4B-202ENST00000400771 TAF5LO75529 589 aa19.47■□□□□ 0.71
ATG4B-202ENST00000400771 FMR1Q06787 632 aaKnown RBP eCLIP19.47■□□□□ 0.71
ATG4B-202ENST00000400771 CCDC57Q2TAC2 916 aa19.47■□□□□ 0.71
ATG4B-202ENST00000400771 CNTROBQ8N137 903 aa19.47■□□□□ 0.71
ATG4B-202ENST00000400771 HELBQ8NG08 1087 aaPredicted RBP19.47■□□□□ 0.71
ATG4B-202ENST00000400771 PUS3Q9BZE2 481 aaKnown RBP19.47■□□□□ 0.71
ATG4B-202ENST00000400771 API5Q9BZZ5 524 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms