RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 DCTPP1Q9H773 170 aa10.92□□□□□ -0.66
SMAD9-203ENST00000399275 ATG3Q9NT62 314 aa10.92□□□□□ -0.66
SMAD9-203ENST00000399275 STIM1Q13586 685 aa10.92□□□□□ -0.66
SMAD9-203ENST00000399275 CCDC178Q5BJE1 867 aa10.92□□□□□ -0.66
SMAD9-203ENST00000399275 TMC6Q7Z403 805 aa10.92□□□□□ -0.66
SMAD9-203ENST00000399275 CDK5RAP3Q96JB5 506 aa10.92□□□□□ -0.66
SMAD9-203ENST00000399275 CALR3Q96L12 384 aaKnown RBP10.92□□□□□ -0.66
SMAD9-203ENST00000399275 ZWINTO95229 277 aa10.92□□□□□ -0.66
SMAD9-203ENST00000399275 CA8P35219 290 aa10.92□□□□□ -0.66
SMAD9-203ENST00000399275 MCTP2Q6DN12 878 aa10.92□□□□□ -0.66
SMAD9-203ENST00000399275 TRIM7Q9C029 511 aa10.92□□□□□ -0.66
SMAD9-203ENST00000399275 ZGPATQ8N5A5 531 aaKnown RBP10.92□□□□□ -0.66
SMAD9-203ENST00000399275 N4BP2L2Q92802 583 aaPredicted RBP10.92□□□□□ -0.66
SMAD9-203ENST00000399275 THUMPD2Q9BTF0 503 aaKnown RBP10.92□□□□□ -0.66
SMAD9-203ENST00000399275 CTNNA3Q9UI47 895 aa10.92□□□□□ -0.66
SMAD9-203ENST00000399275 TNNQ9UQP3 1299 aa10.92□□□□□ -0.66
SMAD9-203ENST00000399275 SHANK2Q9UPX8 1470 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 DYTNA2CJ06 578 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 POLD1P28340 1107 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 SESN3P58005 492 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 PRR16Q569H4 304 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 CCDC155Q8N6L0 562 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 SAAL1Q96ER3 474 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 TAOK3Q9H2K8 898 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 SPINK5Q9NQ38 1064 aaPredicted RBP10.91□□□□□ -0.66
SMAD9-203ENST00000399275 PDE1AP54750 535 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 CKAP4Q07065 602 aaKnown RBP10.91□□□□□ -0.66
SMAD9-203ENST00000399275 AMOTQ4VCS5 1084 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 PRPF31Q8WWY3 499 aaKnown RBP10.91□□□□□ -0.66
SMAD9-203ENST00000399275 RTEL1-TNFRSF6BF6WH68 1400 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 PSMD2Q13200 908 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 IKBKGQ9Y6K9 419 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 RIOK3O14730 519 aaKnown RBP10.91□□□□□ -0.66
SMAD9-203ENST00000399275 TYRO3Q06418 890 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 PLEKHM2Q8IWE5 1019 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 SLC52A1Q9NWF4 448 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 RAPGEF6Q8TEU7 1601 aa10.91□□□□□ -0.66
SMAD9-203ENST00000399275 RAB11FIP4Q86YS3 637 aa10.9□□□□□ -0.66
SMAD9-203ENST00000399275 RNF10Q8N5U6 811 aaKnown RBP10.9□□□□□ -0.66
SMAD9-203ENST00000399275 MBIPQ9NS73 344 aa10.9□□□□□ -0.66
SMAD9-203ENST00000399275 RNF216Q9NWF9 866 aaPredicted RBP10.9□□□□□ -0.66
SMAD9-203ENST00000399275 PTGS1P23219 599 aa10.9□□□□□ -0.66
SMAD9-203ENST00000399275 GRIPAP1Q4V328 841 aa10.9□□□□□ -0.66
SMAD9-203ENST00000399275 NCAPGQ9BPX3 1015 aa10.9□□□□□ -0.66
SMAD9-203ENST00000399275 ANAPC4Q9UJX5 808 aa10.9□□□□□ -0.66
SMAD9-203ENST00000399275 RIPOR2Q9Y4F9 1068 aa10.9□□□□□ -0.66
SMAD9-203ENST00000399275 ZBTB16Q05516 673 aa10.9□□□□□ -0.66
SMAD9-203ENST00000399275 CCDC129Q6ZRS4 1044 aa10.9□□□□□ -0.66
SMAD9-203ENST00000399275 GOLGA5Q8TBA6 731 aa10.9□□□□□ -0.66
SMAD9-203ENST00000399275 EVI5LQ96CN4 794 aa10.9□□□□□ -0.66
SMAD9-203ENST00000399275 KIF21AQ7Z4S6 1674 aa10.9□□□□□ -0.66
SMAD9-203ENST00000399275 FSIP1Q8NA03 581 aa10.9□□□□□ -0.66
SMAD9-203ENST00000399275 TACO1Q9BSH4 297 aaKnown RBP10.9□□□□□ -0.66
SMAD9-203ENST00000399275 HMG20BQ9P0W2 317 aa10.9□□□□□ -0.66
SMAD9-203ENST00000399275 RRP15Q9Y3B9 282 aaKnown RBP10.9□□□□□ -0.66
SMAD9-203ENST00000399275 TMED1Q13445 227 aa10.9□□□□□ -0.67
SMAD9-203ENST00000399275 LCA5Q86VQ0 697 aa10.9□□□□□ -0.67
SMAD9-203ENST00000399275 SPATS2Q86XZ4 545 aaKnown RBP10.9□□□□□ -0.67
SMAD9-203ENST00000399275 XAB2Q9HCS7 855 aaKnown RBP10.9□□□□□ -0.67
SMAD9-203ENST00000399275 TRIM35Q9UPQ4 493 aa10.9□□□□□ -0.67
SMAD9-203ENST00000399275 PPFIA3O75145 1194 aa10.89□□□□□ -0.67
SMAD9-203ENST00000399275 LIG3P49916 1009 aa10.89□□□□□ -0.67
SMAD9-203ENST00000399275 TMCO4Q5TGY1 634 aa10.89□□□□□ -0.67
SMAD9-203ENST00000399275 TRIM68Q6AZZ1 485 aa10.89□□□□□ -0.67
SMAD9-203ENST00000399275 PHLDB2Q86SQ0 1253 aa10.89□□□□□ -0.67
SMAD9-203ENST00000399275 CCDC110Q8TBZ0 833 aa10.89□□□□□ -0.67
SMAD9-203ENST00000399275 VIMP08670 466 aaKnown RBP10.89□□□□□ -0.67
SMAD9-203ENST00000399275 TRIM22Q8IYM9 498 aa10.89□□□□□ -0.67
SMAD9-203ENST00000399275 WASF1Q92558 559 aa10.89□□□□□ -0.67
SMAD9-203ENST00000399275 SEC62Q99442 399 aaKnown RBP10.89□□□□□ -0.67
SMAD9-203ENST00000399275 TANGO6Q9C0B7 1094 aa10.89□□□□□ -0.67
SMAD9-203ENST00000399275 SUFUQ9UMX1 484 aa10.89□□□□□ -0.67
SMAD9-203ENST00000399275 AIMP1Q12904 312 aaKnown RBP10.89□□□□□ -0.67
SMAD9-203ENST00000399275 NEK11Q8NG66 645 aa10.89□□□□□ -0.67
SMAD9-203ENST00000399275 MATR3P43243 847 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMAD9-203ENST00000399275 IRX1P78414 480 aaPredicted RBP10.89□□□□□ -0.67
SMAD9-203ENST00000399275 ARMC2Q8NEN0 867 aa10.89□□□□□ -0.67
SMAD9-203ENST00000399275 U3KPZ7 1027 aaPredicted RBP10.89□□□□□ -0.67
SMAD9-203ENST00000399275 ADGRF5Q8IZF2 1346 aa10.88□□□□□ -0.67
SMAD9-203ENST00000399275 SLC3A2P08195 630 aaKnown RBP10.88□□□□□ -0.67
SMAD9-203ENST00000399275 GFAPP14136 432 aa10.88□□□□□ -0.67
SMAD9-203ENST00000399275 OAS2P29728 719 aaKnown RBP10.88□□□□□ -0.67
SMAD9-203ENST00000399275 GSDMBQ8TAX9 411 aa10.88□□□□□ -0.67
SMAD9-203ENST00000399275 RPSAP08865 295 aaKnown RBP10.88□□□□□ -0.67
SMAD9-203ENST00000399275 JPH2Q9BR39 696 aaPredicted RBP10.88□□□□□ -0.67
SMAD9-203ENST00000399275 STMN4Q9H169 189 aaPredicted RBP10.88□□□□□ -0.67
SMAD9-203ENST00000399275 PAIP2BQ9ULR5 123 aaKnown RBP10.88□□□□□ -0.67
SMAD9-203ENST00000399275 CEP131Q9UPN4 1083 aa10.88□□□□□ -0.67
SMAD9-203ENST00000399275 WDR62O43379 1518 aa10.88□□□□□ -0.67
SMAD9-203ENST00000399275 NUP153P49790 1475 aaKnown RBP10.88□□□□□ -0.67
SMAD9-203ENST00000399275 GAS2L3Q86XJ1 694 aa10.88□□□□□ -0.67
SMAD9-203ENST00000399275 CABS1Q96KC9 395 aa10.88□□□□□ -0.67
SMAD9-203ENST00000399275 TFIP11Q9UBB9 837 aaKnown RBP10.88□□□□□ -0.67
SMAD9-203ENST00000399275 A0A1W2PRG0 241 aa10.88□□□□□ -0.67
SMAD9-203ENST00000399275 SMIM23A6NLE4 172 aa10.88□□□□□ -0.67
SMAD9-203ENST00000399275 PIP4K2BP78356 416 aa10.88□□□□□ -0.67
SMAD9-203ENST00000399275 SNCBQ16143 134 aa10.88□□□□□ -0.67
SMAD9-203ENST00000399275 SEPT8Q92599 483 aa10.88□□□□□ -0.67
SMAD9-203ENST00000399275 ALS2CR12Q96Q35 445 aa10.88□□□□□ -0.67
SMAD9-203ENST00000399275 ADGRL2O95490 1459 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms