RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 TAF7LQ5H9L4 462 aa14.08□□□□□ -0.15
COL25A1-202ENST00000399127 CCDC83Q8IWF9 413 aa14.08□□□□□ -0.15
COL25A1-202ENST00000399127 SNRKQ9NRH2 765 aa14.08□□□□□ -0.15
COL25A1-202ENST00000399127 PCCAP05165 728 aaPredicted RBP14.08□□□□□ -0.16
COL25A1-202ENST00000399127 CLCN1P35523 988 aa14.08□□□□□ -0.16
COL25A1-202ENST00000399127 VPS53Q5VIR6 699 aa14.08□□□□□ -0.16
COL25A1-202ENST00000399127 NLRP10Q86W26 655 aa14.08□□□□□ -0.16
COL25A1-202ENST00000399127 ZBTB38Q8NAP3 1195 aaPredicted RBP14.08□□□□□ -0.16
COL25A1-202ENST00000399127 KCNB2Q92953 911 aa14.08□□□□□ -0.16
COL25A1-202ENST00000399127 PAG1Q9NWQ8 432 aa14.08□□□□□ -0.16
COL25A1-202ENST00000399127 TRIM28Q13263 835 aaKnown RBP14.07□□□□□ -0.16
COL25A1-202ENST00000399127 CAVIN1Q6NZI2 390 aaKnown RBP14.07□□□□□ -0.16
COL25A1-202ENST00000399127 NECAB1Q8N987 351 aa14.07□□□□□ -0.16
COL25A1-202ENST00000399127 CEP126Q9P2H0 1117 aa14.07□□□□□ -0.16
COL25A1-202ENST00000399127 ADORA1P30542 326 aa14.07□□□□□ -0.16
COL25A1-202ENST00000399127 KBTBD3Q8NAB2 608 aa14.07□□□□□ -0.16
COL25A1-202ENST00000399127 TM6SF1Q9BZW5 370 aa14.07□□□□□ -0.16
COL25A1-202ENST00000399127 LOC102724428A0A0B4J2F2 783 aa14.06□□□□□ -0.16
COL25A1-202ENST00000399127 IFIT1P09914 478 aaKnown RBP14.06□□□□□ -0.16
COL25A1-202ENST00000399127 SIK1P57059 783 aa14.06□□□□□ -0.16
COL25A1-202ENST00000399127 IFIT5Q13325 482 aaKnown RBP14.06□□□□□ -0.16
COL25A1-202ENST00000399127 RNF20Q5VTR2 975 aa14.06□□□□□ -0.16
COL25A1-202ENST00000399127 TRMT112Q9UI30 125 aaKnown RBP14.06□□□□□ -0.16
COL25A1-202ENST00000399127 FAM177BA6PVY3 158 aa14.06□□□□□ -0.16
COL25A1-202ENST00000399127 CIAO1O76071 339 aa14.06□□□□□ -0.16
COL25A1-202ENST00000399127 FKBP4Q02790 459 aaKnown RBP eCLIP14.06□□□□□ -0.16
COL25A1-202ENST00000399127 ME3Q16798 604 aa14.06□□□□□ -0.16
COL25A1-202ENST00000399127 GORABQ5T7V8 394 aa14.06□□□□□ -0.16
COL25A1-202ENST00000399127 PTF1AQ7RTS3 328 aa14.06□□□□□ -0.16
COL25A1-202ENST00000399127 DZIP3Q86Y13 1208 aaKnown RBP14.06□□□□□ -0.16
COL25A1-202ENST00000399127 GPT2Q8TD30 523 aa14.06□□□□□ -0.16
COL25A1-202ENST00000399127 GREM2Q9H772 168 aa14.06□□□□□ -0.16
COL25A1-202ENST00000399127 GDPD2Q9HCC8 539 aa14.06□□□□□ -0.16
COL25A1-202ENST00000399127 RPAP1Q9BWH6 1393 aaPredicted RBP14.06□□□□□ -0.16
COL25A1-202ENST00000399127 KCNQ4P56696 695 aa14.05□□□□□ -0.16
COL25A1-202ENST00000399127 MCMDC2Q4G0Z9 681 aa14.05□□□□□ -0.16
COL25A1-202ENST00000399127 QTRT2Q9H974 415 aaKnown RBP14.05□□□□□ -0.16
COL25A1-202ENST00000399127 GRPEL1Q9HAV7 217 aa14.05□□□□□ -0.16
COL25A1-202ENST00000399127 GPR108Q9NPR9 543 aa14.05□□□□□ -0.16
COL25A1-202ENST00000399127 RBM27Q9P2N5 1060 aaKnown RBP14.05□□□□□ -0.16
COL25A1-202ENST00000399127 TRPC5Q9UL62 973 aaPredicted RBP14.05□□□□□ -0.16
COL25A1-202ENST00000399127 TPCN1Q9ULQ1 816 aa14.05□□□□□ -0.16
COL25A1-202ENST00000399127 NSFL1CQ9UNZ2 370 aaKnown RBP14.05□□□□□ -0.16
COL25A1-202ENST00000399127 SMC3Q9UQE7 1217 aa14.05□□□□□ -0.16
COL25A1-202ENST00000399127 PALLDQ8WX93 1383 aa14.05□□□□□ -0.16
COL25A1-202ENST00000399127 BLOC1S2Q6QNY1 142 aa14.05□□□□□ -0.16
COL25A1-202ENST00000399127 PDCL3Q9H2J4 239 aa14.05□□□□□ -0.16
COL25A1-202ENST00000399127 IRS4O14654 1257 aaPredicted RBP14.04□□□□□ -0.16
COL25A1-202ENST00000399127 ITGA6P23229 1130 aa14.04□□□□□ -0.16
COL25A1-202ENST00000399127 TPRNQ4KMQ1 711 aa14.04□□□□□ -0.16
COL25A1-202ENST00000399127 TTLL11Q8NHH1 800 aa14.04□□□□□ -0.16
COL25A1-202ENST00000399127 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.04□□□□□ -0.16
COL25A1-202ENST00000399127 CSF1RP07333 972 aa14.04□□□□□ -0.16
COL25A1-202ENST00000399127 SYT1P21579 422 aa14.04□□□□□ -0.16
COL25A1-202ENST00000399127 PSMA5P28066 241 aa14.04□□□□□ -0.16
COL25A1-202ENST00000399127 ST3GAL1Q11201 340 aa14.04□□□□□ -0.16
COL25A1-202ENST00000399127 SMARCC1Q92922 1105 aaPredicted RBP14.04□□□□□ -0.16
COL25A1-202ENST00000399127 XAGE2Q96GT9 111 aa14.04□□□□□ -0.16
COL25A1-202ENST00000399127 WDR33Q9C0J8 1336 aaKnown RBP14.04□□□□□ -0.16
COL25A1-202ENST00000399127 UBN2Q6ZU65 1347 aa14.03□□□□□ -0.16
COL25A1-202ENST00000399127 GJB2P29033 226 aa14.03□□□□□ -0.16
COL25A1-202ENST00000399127 MRE11P49959 708 aa14.03□□□□□ -0.16
COL25A1-202ENST00000399127 ITPK1Q13572 414 aa14.03□□□□□ -0.16
COL25A1-202ENST00000399127 PI16Q6UXB8 463 aa14.03□□□□□ -0.16
COL25A1-202ENST00000399127 LDHAL6AQ6ZMR3 332 aa14.03□□□□□ -0.16
COL25A1-202ENST00000399127 RPS6KB1P23443 525 aa14.03□□□□□ -0.16
COL25A1-202ENST00000399127 CRKLP46109 303 aaKnown RBP14.03□□□□□ -0.16
COL25A1-202ENST00000399127 SCARF1Q14162 830 aa14.03□□□□□ -0.16
COL25A1-202ENST00000399127 HSP90AB3PQ58FF7 597 aa14.03□□□□□ -0.16
COL25A1-202ENST00000399127 TTC39AQ5SRH9 613 aa14.03□□□□□ -0.16
COL25A1-202ENST00000399127 SEPT12Q8IYM1 358 aa14.03□□□□□ -0.16
COL25A1-202ENST00000399127 PLA2G12BQ9BX93 195 aa14.03□□□□□ -0.16
COL25A1-202ENST00000399127 CYP21A2P08686 494 aa14.02□□□□□ -0.16
COL25A1-202ENST00000399127 IL6STP40189 918 aaPredicted RBP14.02□□□□□ -0.16
COL25A1-202ENST00000399127 CTSWP56202 376 aa14.02□□□□□ -0.16
COL25A1-202ENST00000399127 STK3Q13188 491 aa14.02□□□□□ -0.16
COL25A1-202ENST00000399127 METTL24Q5JXM2 366 aa14.02□□□□□ -0.16
COL25A1-202ENST00000399127 CCDC87Q9NVE4 849 aa14.02□□□□□ -0.16
COL25A1-202ENST00000399127 A0A0G2JLW4 131 aa14.02□□□□□ -0.17
COL25A1-202ENST00000399127 STX6O43752 255 aa14.02□□□□□ -0.17
COL25A1-202ENST00000399127 ZSCAN23Q3MJ62 389 aa14.02□□□□□ -0.17
COL25A1-202ENST00000399127 CCDC158Q5M9N0 1113 aa14.02□□□□□ -0.17
COL25A1-202ENST00000399127 USPL1Q5W0Q7 1092 aa14.02□□□□□ -0.17
COL25A1-202ENST00000399127 CNNM1Q9NRU3 951 aa14.02□□□□□ -0.17
COL25A1-202ENST00000399127 HMG20BQ9P0W2 317 aa14.02□□□□□ -0.17
COL25A1-202ENST00000399127 CDHR2Q9BYE9 1310 aa14.01□□□□□ -0.17
COL25A1-202ENST00000399127 TOB2Q14106 344 aaPredicted RBP14.01□□□□□ -0.17
COL25A1-202ENST00000399127 INTS5Q6P9B9 1019 aaKnown RBP14.01□□□□□ -0.17
COL25A1-202ENST00000399127 ZSCAN31Q96LW9 406 aaPredicted RBP14.01□□□□□ -0.17
COL25A1-202ENST00000399127 LRRC2Q9BYS8 371 aa14.01□□□□□ -0.17
COL25A1-202ENST00000399127 SH2B1Q9NRF2 756 aaPredicted RBP14.01□□□□□ -0.17
COL25A1-202ENST00000399127 NUP98P52948 1817 aa14.01□□□□□ -0.17
COL25A1-202ENST00000399127 RFX7Q2KHR2 1363 aa14.01□□□□□ -0.17
COL25A1-202ENST00000399127 SH3TC1Q8TE82 1336 aa14.01□□□□□ -0.17
COL25A1-202ENST00000399127 ZSCAN22P10073 491 aaPredicted RBP14.01□□□□□ -0.17
COL25A1-202ENST00000399127 HCLS1P14317 486 aaPredicted RBP14.01□□□□□ -0.17
COL25A1-202ENST00000399127 AKAP2Q9Y2D5 859 aa14.01□□□□□ -0.17
COL25A1-202ENST00000399127 TCHHQ07283 1943 aa14□□□□□ -0.17
COL25A1-202ENST00000399127 ANKRD18BA2A2Z9 1011 aa14□□□□□ -0.17
COL25A1-202ENST00000399127 ATP2B3Q16720 1220 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms