RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 GJB2P29033 226 aa21.08■□□□□ 0.97
HLA-DQB1-204ENST00000399084 GORABQ5T7V8 394 aa21.08■□□□□ 0.97
HLA-DQB1-204ENST00000399084 CCDC83Q8IWF9 413 aa21.08■□□□□ 0.97
HLA-DQB1-204ENST00000399084 FAM89AQ96GI7 184 aa21.08■□□□□ 0.97
HLA-DQB1-204ENST00000399084 TPCN1Q9ULQ1 816 aa21.08■□□□□ 0.97
HLA-DQB1-204ENST00000399084 ANKRD18BA2A2Z9 1011 aa21.07■□□□□ 0.96
HLA-DQB1-204ENST00000399084 PDE8AO60658 829 aa21.07■□□□□ 0.96
HLA-DQB1-204ENST00000399084 LETM1O95202 739 aaPredicted RBP21.07■□□□□ 0.96
HLA-DQB1-204ENST00000399084 DDB1Q16531 1140 aa21.07■□□□□ 0.96
HLA-DQB1-204ENST00000399084 TTLL11Q8NHH1 800 aa21.07■□□□□ 0.96
HLA-DQB1-204ENST00000399084 ZNF594Q96JF6 807 aaPredicted RBP21.07■□□□□ 0.96
HLA-DQB1-204ENST00000399084 CTNNA3Q9UI47 895 aa21.07■□□□□ 0.96
HLA-DQB1-204ENST00000399084 ZNF330Q9Y3S2 320 aaPredicted RBP21.07■□□□□ 0.96
HLA-DQB1-204ENST00000399084 CPA1P15085 419 aa21.07■□□□□ 0.96
HLA-DQB1-204ENST00000399084 CTSWP56202 376 aa21.07■□□□□ 0.96
HLA-DQB1-204ENST00000399084 TTC39AQ5SRH9 613 aa21.07■□□□□ 0.96
HLA-DQB1-204ENST00000399084 BARGINQ6ZT62 677 aa21.07■□□□□ 0.96
HLA-DQB1-204ENST00000399084 RIPOR2Q9Y4F9 1068 aa21.07■□□□□ 0.96
HLA-DQB1-204ENST00000399084 ZNF34Q8IZ26 560 aa21.06■□□□□ 0.96
HLA-DQB1-204ENST00000399084 SLC4A9Q96Q91 983 aa21.06■□□□□ 0.96
HLA-DQB1-204ENST00000399084 PUS3Q9BZE2 481 aaKnown RBP21.06■□□□□ 0.96
HLA-DQB1-204ENST00000399084 CICQ96RK0 1608 aaPredicted RBP21.05■□□□□ 0.96
HLA-DQB1-204ENST00000399084 PRIM1P49642 420 aaKnown RBP21.05■□□□□ 0.96
HLA-DQB1-204ENST00000399084 ZSCAN25Q6NSZ9 544 aa21.05■□□□□ 0.96
HLA-DQB1-204ENST00000399084 LRSAM1Q6UWE0 723 aa21.05■□□□□ 0.96
HLA-DQB1-204ENST00000399084 DZIP3Q86Y13 1208 aaKnown RBP21.05■□□□□ 0.96
HLA-DQB1-204ENST00000399084 FBXL16Q8N461 479 aa21.05■□□□□ 0.96
HLA-DQB1-204ENST00000399084 XAGE2Q96GT9 111 aa21.05■□□□□ 0.96
HLA-DQB1-204ENST00000399084 LLPHQ9BRT6 129 aaKnown RBP21.05■□□□□ 0.96
HLA-DQB1-204ENST00000399084 IRS4O14654 1257 aaPredicted RBP21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 LARGE1O95461 756 aa21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 NASPP49321 788 aaPredicted RBP21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 CCDC173Q0VFZ6 552 aa21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 TOB2Q14106 344 aaPredicted RBP21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 HLFQ16534 295 aa21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 LDHAL6AQ6ZMR3 332 aa21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 SMARCC1Q92922 1105 aaPredicted RBP21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 TRMT112Q9UI30 125 aaKnown RBP21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 MTMR6Q9Y217 621 aa21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 RGL2O15211 777 aa21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 CYP21A2P08686 494 aa21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 EIF5P55010 431 aaKnown RBP21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 UBE2HP62256 183 aa21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 TTF1Q15361 905 aaPredicted RBP21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 FOXD4L5Q5VV16 416 aaPredicted RBP21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 DHX32Q7L7V1 743 aaKnown RBP21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 USP48Q86UV5 1035 aa21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 FOXD4L4Q8WXT5 416 aaPredicted RBP21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 ZBTB1Q9Y2K1 713 aa21.04■□□□□ 0.96
HLA-DQB1-204ENST00000399084 ITGA6P23229 1130 aa21.03■□□□□ 0.96
HLA-DQB1-204ENST00000399084 PARP10Q53GL7 1025 aa21.03■□□□□ 0.96
HLA-DQB1-204ENST00000399084 LARP1BQ659C4 914 aaKnown RBP21.03■□□□□ 0.96
HLA-DQB1-204ENST00000399084 PPP1R9BQ96SB3 815 aa21.03■□□□□ 0.96
HLA-DQB1-204ENST00000399084 PANK2Q9BZ23 570 aa21.03■□□□□ 0.96
HLA-DQB1-204ENST00000399084 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.03■□□□□ 0.96
HLA-DQB1-204ENST00000399084 NRAPQ86VF7 1730 aa21.02■□□□□ 0.96
HLA-DQB1-204ENST00000399084 NWD2Q9ULI1 1742 aa21.02■□□□□ 0.96
HLA-DQB1-204ENST00000399084 ATP2B3Q16720 1220 aa21.02■□□□□ 0.96
HLA-DQB1-204ENST00000399084 SYTL4Q96C24 671 aaPredicted RBP21.02■□□□□ 0.96
HLA-DQB1-204ENST00000399084 ARXQ96QS3 562 aa21.02■□□□□ 0.96
HLA-DQB1-204ENST00000399084 AGXT2Q9BYV1 514 aa21.02■□□□□ 0.96
HLA-DQB1-204ENST00000399084 CCDC87Q9NVE4 849 aa21.02■□□□□ 0.96
HLA-DQB1-204ENST00000399084 KIF3AQ9Y496 699 aa21.02■□□□□ 0.96
HLA-DQB1-204ENST00000399084 SPATA31A5Q5VU36 1347 aa21.02■□□□□ 0.96
HLA-DQB1-204ENST00000399084 SPATA31A7Q8IWB4 1347 aa21.02■□□□□ 0.96
HLA-DQB1-204ENST00000399084 MYH3P11055 1940 aa21.02■□□□□ 0.95
HLA-DQB1-204ENST00000399084 HSPD1P10809 573 aaKnown RBP21.01■□□□□ 0.95
HLA-DQB1-204ENST00000399084 METTL24Q5JXM2 366 aa21.01■□□□□ 0.95
HLA-DQB1-204ENST00000399084 TMEM63CQ9P1W3 806 aa21.01■□□□□ 0.95
HLA-DQB1-204ENST00000399084 NUP98P52948 1817 aa21.01■□□□□ 0.95
HLA-DQB1-204ENST00000399084 MROH5Q6ZUA9 1318 aa21.01■□□□□ 0.95
HLA-DQB1-204ENST00000399084 UQCRFS1P1P0C7P4 283 aa21.01■□□□□ 0.95
HLA-DQB1-204ENST00000399084 SEC62Q99442 399 aaKnown RBP21.01■□□□□ 0.95
HLA-DQB1-204ENST00000399084 ST3GAL1Q11201 340 aa21■□□□□ 0.95
HLA-DQB1-204ENST00000399084 APPBP2Q92624 585 aa21■□□□□ 0.95
HLA-DQB1-204ENST00000399084 GTF3C6Q969F1 213 aa21■□□□□ 0.95
HLA-DQB1-204ENST00000399084 CNNM1Q9NRU3 951 aa21■□□□□ 0.95
HLA-DQB1-204ENST00000399084 PHLPP1O60346 1717 aa20.99■□□□□ 0.95
HLA-DQB1-204ENST00000399084 DOT1LQ8TEK3 1739 aa20.99■□□□□ 0.95
HLA-DQB1-204ENST00000399084 PDE8BO95263 885 aa20.99■□□□□ 0.95
HLA-DQB1-204ENST00000399084 LARP6Q9BRS8 491 aaKnown RBP20.99■□□□□ 0.95
HLA-DQB1-204ENST00000399084 GREM2Q9H772 168 aa20.99■□□□□ 0.95
HLA-DQB1-204ENST00000399084 NDUFB9Q9Y6M9 179 aa20.99■□□□□ 0.95
HLA-DQB1-204ENST00000399084 MAST3O60307 1309 aa20.99■□□□□ 0.95
HLA-DQB1-204ENST00000399084 RREB1Q92766 1687 aa20.99■□□□□ 0.95
HLA-DQB1-204ENST00000399084 GPTP24298 496 aa20.98■□□□□ 0.95
HLA-DQB1-204ENST00000399084 EXOSC10Q01780 885 aaKnown RBP20.98■□□□□ 0.95
HLA-DQB1-204ENST00000399084 FKBP4Q02790 459 aaKnown RBP eCLIP20.98■□□□□ 0.95
HLA-DQB1-204ENST00000399084 CCDC129Q6ZRS4 1044 aa20.98■□□□□ 0.95
HLA-DQB1-204ENST00000399084 NECAB1Q8N987 351 aa20.98■□□□□ 0.95
HLA-DQB1-204ENST00000399084 TRIM44Q96DX7 344 aaPredicted RBP20.98■□□□□ 0.95
HLA-DQB1-204ENST00000399084 ELP1O95163 1332 aa20.98■□□□□ 0.95
HLA-DQB1-204ENST00000399084 RTL9Q8NET4 1388 aa20.98■□□□□ 0.95
HLA-DQB1-204ENST00000399084 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.98■□□□□ 0.95
HLA-DQB1-204ENST00000399084 RIC1Q4ADV7 1423 aa20.98■□□□□ 0.95
HLA-DQB1-204ENST00000399084 INTS5Q6P9B9 1019 aaKnown RBP20.98■□□□□ 0.95
HLA-DQB1-204ENST00000399084 Q6ZUG5 572 aa20.98■□□□□ 0.95
HLA-DQB1-204ENST00000399084 VGLL2Q8N8G2 317 aa20.98■□□□□ 0.95
HLA-DQB1-204ENST00000399084 FAM184AQ8NB25 1140 aa20.98■□□□□ 0.95
HLA-DQB1-204ENST00000399084 UBAP1LF5GYI3 381 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms