RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 LARP1BQ659C4 914 aaKnown RBP10.51□□□□□ -0.73
GIN1-201ENST00000399004 PI4KAP1Q8N8J0 262 aa10.51□□□□□ -0.73
GIN1-201ENST00000399004 TMX1Q9H3N1 280 aa10.51□□□□□ -0.73
GIN1-201ENST00000399004 CNTROBQ8N137 903 aa10.51□□□□□ -0.73
GIN1-201ENST00000399004 EVI5LQ96CN4 794 aa10.51□□□□□ -0.73
GIN1-201ENST00000399004 ABCC12Q96J65 1359 aa10.51□□□□□ -0.73
GIN1-201ENST00000399004 MCM5P33992 734 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 ANO6Q4KMQ2 910 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 ZNF530Q6P9A1 599 aaPredicted RBP10.5□□□□□ -0.73
GIN1-201ENST00000399004 DNAJC25Q9H1X3 360 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 KCNF1Q9H3M0 494 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 GPR108Q9NPR9 543 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 DACT1Q9NYF0 836 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 SPATA31A3Q5VYP0 1347 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 ZNF609O15014 1411 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 HIP1O00291 1037 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 PTPN21Q16825 1174 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 PROSER3Q2NL68 480 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 RUFY3Q7L099 469 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 CCDC8Q9H0W5 538 aaPredicted RBP10.5□□□□□ -0.73
GIN1-201ENST00000399004 TNMDQ9H2S6 317 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 ATRNO75882 1429 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 F13A1P00488 732 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 ZSCAN20P17040 1043 aaPredicted RBP10.5□□□□□ -0.73
GIN1-201ENST00000399004 SMAP1Q8IYB5 467 aaPredicted RBP10.5□□□□□ -0.73
GIN1-201ENST00000399004 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.5□□□□□ -0.73
GIN1-201ENST00000399004 METTL22Q9BUU2 404 aaPredicted RBP10.5□□□□□ -0.73
GIN1-201ENST00000399004 ECHDC1Q9NTX5 307 aa10.5□□□□□ -0.73
GIN1-201ENST00000399004 NEURL1BA8MQ27 555 aa10.49□□□□□ -0.73
GIN1-201ENST00000399004 GRM8O00222 908 aa10.49□□□□□ -0.73
GIN1-201ENST00000399004 TNNT1P13805 278 aa10.49□□□□□ -0.73
GIN1-201ENST00000399004 HMGN5P82970 282 aaKnown RBP10.49□□□□□ -0.73
GIN1-201ENST00000399004 PTH1RQ03431 593 aa10.49□□□□□ -0.73
GIN1-201ENST00000399004 ISM2Q6H9L7 571 aa10.49□□□□□ -0.73
GIN1-201ENST00000399004 ZNF790Q6PG37 636 aa10.49□□□□□ -0.73
GIN1-201ENST00000399004 CDC37L1Q7L3B6 337 aa10.49□□□□□ -0.73
GIN1-201ENST00000399004 FAM177A1Q8N128 213 aaPredicted RBP10.49□□□□□ -0.73
GIN1-201ENST00000399004 EDC3Q96F86 508 aaKnown RBP10.49□□□□□ -0.73
GIN1-201ENST00000399004 ORAI2Q96SN7 254 aa10.49□□□□□ -0.73
GIN1-201ENST00000399004 PDRG1Q9NUG6 133 aa10.49□□□□□ -0.73
GIN1-201ENST00000399004 ELP1O95163 1332 aa10.49□□□□□ -0.73
GIN1-201ENST00000399004 LRRC59Q96AG4 307 aaKnown RBP10.49□□□□□ -0.73
GIN1-201ENST00000399004 AGXT2Q9BYV1 514 aa10.49□□□□□ -0.73
GIN1-201ENST00000399004 MAP3K2Q9Y2U5 619 aa10.49□□□□□ -0.73
GIN1-201ENST00000399004 COL24A1Q17RW2 1714 aa10.49□□□□□ -0.73
GIN1-201ENST00000399004 DOT1LQ8TEK3 1739 aa10.49□□□□□ -0.73
GIN1-201ENST00000399004 CCDC192P0DO97 292 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 CDK11BP21127 795 aaKnown RBP10.48□□□□□ -0.73
GIN1-201ENST00000399004 UBE2HP62256 183 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 PSME1Q06323 249 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 RBM43Q6ZSC3 357 aaKnown RBP10.48□□□□□ -0.73
GIN1-201ENST00000399004 KRT28Q7Z3Y7 464 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 RAB11FIP4Q86YS3 637 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 KLHDC4Q8TBB5 520 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 NUP62CLQ9H1M0 184 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 SH2B1Q9NRF2 756 aaPredicted RBP10.48□□□□□ -0.73
GIN1-201ENST00000399004 ATG3Q9NT62 314 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 GOLGA6L6A8MZA4 724 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 UVSSAQ2YD98 709 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 BBXQ8WY36 941 aaPredicted RBP10.48□□□□□ -0.73
GIN1-201ENST00000399004 SUCLG2Q96I99 432 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 ZSCAN31Q96LW9 406 aaPredicted RBP10.48□□□□□ -0.73
GIN1-201ENST00000399004 ST7Q9NRC1 585 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.48□□□□□ -0.73
GIN1-201ENST00000399004 SOS2Q07890 1332 aaPredicted RBP10.48□□□□□ -0.73
GIN1-201ENST00000399004 PIP4K2AP48426 406 aaPredicted RBP10.48□□□□□ -0.73
GIN1-201ENST00000399004 MTERF4Q7Z6M4 381 aaKnown RBP10.48□□□□□ -0.73
GIN1-201ENST00000399004 DCAF5Q96JK2 942 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 FTOQ9C0B1 505 aaKnown RBP eCLIP10.48□□□□□ -0.73
GIN1-201ENST00000399004 BOLA2Q9H3K6 86 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 LIMCH1Q9UPQ0 1083 aa10.48□□□□□ -0.73
GIN1-201ENST00000399004 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.48□□□□□ -0.73
GIN1-201ENST00000399004 SH3TC1Q8TE82 1336 aa10.47□□□□□ -0.73
GIN1-201ENST00000399004 CHGBP05060 677 aa10.47□□□□□ -0.73
GIN1-201ENST00000399004 GCKRQ14397 625 aa10.47□□□□□ -0.73
GIN1-201ENST00000399004 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
GIN1-201ENST00000399004 FAM227BQ96M60 508 aa10.47□□□□□ -0.73
GIN1-201ENST00000399004 MAST2Q6P0Q8 1798 aa10.47□□□□□ -0.73
GIN1-201ENST00000399004 SCN7AQ01118 1682 aa10.47□□□□□ -0.73
GIN1-201ENST00000399004 ATP5JP18859 108 aa10.47□□□□□ -0.73
GIN1-201ENST00000399004 HSP90AA4PQ58FG1 418 aa10.47□□□□□ -0.73
GIN1-201ENST00000399004 ESCO1Q5FWF5 840 aa10.47□□□□□ -0.73
GIN1-201ENST00000399004 SPATA32Q96LK8 384 aa10.47□□□□□ -0.73
GIN1-201ENST00000399004 H3BQV1 296 aa10.46□□□□□ -0.73
GIN1-201ENST00000399004 IFIT2P09913 472 aaKnown RBP10.46□□□□□ -0.73
GIN1-201ENST00000399004 DMTNQ08495 405 aa10.46□□□□□ -0.73
GIN1-201ENST00000399004 MAP3K11Q16584 847 aa10.46□□□□□ -0.73
GIN1-201ENST00000399004 IFFO2Q5TF58 517 aa10.46□□□□□ -0.73
GIN1-201ENST00000399004 C9orf78Q9NZ63 289 aaPredicted RBP10.46□□□□□ -0.73
GIN1-201ENST00000399004 BECN2A8MW95 431 aa10.46□□□□□ -0.73
GIN1-201ENST00000399004 GOLGA6L19H0YKK7 550 aa10.46□□□□□ -0.73
GIN1-201ENST00000399004 TYRO3Q06418 890 aa10.46□□□□□ -0.73
GIN1-201ENST00000399004 LARP1Q6PKG0 1096 aaKnown RBP10.46□□□□□ -0.73
GIN1-201ENST00000399004 TTC6Q86TZ1 520 aa10.46□□□□□ -0.73
GIN1-201ENST00000399004 CCDC112Q8NEF3 446 aa10.46□□□□□ -0.73
GIN1-201ENST00000399004 CLIP2Q9UDT6 1046 aa10.46□□□□□ -0.73
GIN1-201ENST00000399004 USP16Q9Y5T5 823 aa10.46□□□□□ -0.73
GIN1-201ENST00000399004 TAF6LQ9Y6J9 622 aa10.46□□□□□ -0.73
GIN1-201ENST00000399004 SLIT2O94813 1529 aa10.46□□□□□ -0.74
GIN1-201ENST00000399004 BIN1O00499 593 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms