RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 SCAND2PQ9GZW5 306 aaPredicted RBP23.09■■□□□ 1.29
COL13A1-205ENST00000398978 SNRPA1P09661 255 aaKnown RBP23.08■■□□□ 1.29
COL13A1-205ENST00000398978 KIAA1524Q8TCG1 905 aa23.08■■□□□ 1.29
COL13A1-205ENST00000398978 HMG20BQ9P0W2 317 aa23.08■■□□□ 1.29
COL13A1-205ENST00000398978 TRIM5Q9C035 493 aa23.08■■□□□ 1.29
COL13A1-205ENST00000398978 MCMDC2Q4G0Z9 681 aa23.07■■□□□ 1.28
COL13A1-205ENST00000398978 CCDC85AQ96PX6 553 aaPredicted RBP23.07■■□□□ 1.28
COL13A1-205ENST00000398978 MEGF6O75095 1541 aa23.07■■□□□ 1.28
COL13A1-205ENST00000398978 ZNF710Q8N1W2 664 aa23.07■■□□□ 1.28
COL13A1-205ENST00000398978 RESTQ13127 1097 aa23.07■■□□□ 1.28
COL13A1-205ENST00000398978 USPL1Q5W0Q7 1092 aa23.06■■□□□ 1.28
COL13A1-205ENST00000398978 TTLL7Q6ZT98 887 aa23.06■■□□□ 1.28
COL13A1-205ENST00000398978 IFNL2Q8IZJ0 200 aa23.06■■□□□ 1.28
COL13A1-205ENST00000398978 ELP1O95163 1332 aa23.06■■□□□ 1.28
COL13A1-205ENST00000398978 PRDM10Q9NQV6 1147 aa23.06■■□□□ 1.28
COL13A1-205ENST00000398978 RAB11FIP4Q86YS3 637 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 SPTLC3Q9NUV7 552 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 CABP4P57796 275 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 LRRC24Q50LG9 513 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 TTLL5Q6EMB2 1281 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 CLSTN2Q9H4D0 955 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 GPHNQ9NQX3 736 aaPredicted RBP23.05■■□□□ 1.28
COL13A1-205ENST00000398978 ZNF330Q9Y3S2 320 aaPredicted RBP23.05■■□□□ 1.28
COL13A1-205ENST00000398978 HSP90AB3PQ58FF7 597 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 HAUS7Q99871 368 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 ZBTB3Q9H5J0 574 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 ZNF165P49910 485 aa23.04■■□□□ 1.28
COL13A1-205ENST00000398978 SIPA1L3O60292 1781 aaPredicted RBP23.04■■□□□ 1.28
COL13A1-205ENST00000398978 TSGA10IPQ3SY00 556 aa23.04■■□□□ 1.28
COL13A1-205ENST00000398978 FMNL2Q96PY5 1086 aa23.04■■□□□ 1.28
COL13A1-205ENST00000398978 U3KPZ7 1027 aaPredicted RBP23.03■■□□□ 1.28
COL13A1-205ENST00000398978 CTDNEP1O95476 244 aa23.03■■□□□ 1.28
COL13A1-205ENST00000398978 KRT32Q14532 448 aa23.03■■□□□ 1.28
COL13A1-205ENST00000398978 SLIT3O75094 1523 aa23.03■■□□□ 1.28
COL13A1-205ENST00000398978 OVOS2A0A0G2JMS6 1433 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 NBPF26B4DH59 902 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 A1BGP04217 495 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 NBPF14Q5TI25 921 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 OTUD7BQ6GQQ9 843 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 NBPF10Q6P3W6 841 aaKnown RBP23.02■■□□□ 1.28
COL13A1-205ENST00000398978 NBPF15Q8N660 670 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 PUS3Q9BZE2 481 aaKnown RBP23.02■■□□□ 1.28
COL13A1-205ENST00000398978 JCADQ9P266 1359 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 RIOK3O14730 519 aaKnown RBP23.02■■□□□ 1.28
COL13A1-205ENST00000398978 KBTBD3Q8NAB2 608 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 DDX19AQ9NUU7 478 aaKnown RBP23.02■■□□□ 1.28
COL13A1-205ENST00000398978 HAND2P61296 217 aa23.01■■□□□ 1.27
COL13A1-205ENST00000398978 RABL6Q3YEC7 729 aaPredicted RBP23.01■■□□□ 1.27
COL13A1-205ENST00000398978 C16orf45Q96MC5 204 aaPredicted RBP23.01■■□□□ 1.27
COL13A1-205ENST00000398978 PAG1Q9NWQ8 432 aa23.01■■□□□ 1.27
COL13A1-205ENST00000398978 PTPDC1A2A3K4 754 aa23.01■■□□□ 1.27
COL13A1-205ENST00000398978 ARID5BQ14865 1188 aa23.01■■□□□ 1.27
COL13A1-205ENST00000398978 C11orf57Q6ZUT1 292 aaPredicted RBP23.01■■□□□ 1.27
COL13A1-205ENST00000398978 NSUN7Q8NE18 718 aaKnown RBP23.01■■□□□ 1.27
COL13A1-205ENST00000398978 GOLPH3LQ9H4A5 285 aa23.01■■□□□ 1.27
COL13A1-205ENST00000398978 GOLGA6L6A8MZA4 724 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 CASP7P55210 303 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 ATG9AQ7Z3C6 839 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 PRIMPOLQ96LW4 560 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 ALDH8A1Q9H2A2 487 aaPredicted RBP23■■□□□ 1.27
COL13A1-205ENST00000398978 FOXO4P98177 505 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 USP28Q96RU2 1077 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 BCL2L12Q9HB09 334 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 KIF3AQ9Y496 699 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 ZNF75DP51815 510 aa22.99■■□□□ 1.27
COL13A1-205ENST00000398978 FKBP4Q02790 459 aaKnown RBP eCLIP22.99■■□□□ 1.27
COL13A1-205ENST00000398978 CCDC144BQ3MJ40 725 aa22.99■■□□□ 1.27
COL13A1-205ENST00000398978 CCAR1Q8IX12 1150 aaKnown RBP22.99■■□□□ 1.27
COL13A1-205ENST00000398978 CCDC144CPQ8IYA2 1237 aa22.99■■□□□ 1.27
COL13A1-205ENST00000398978 PHRF1Q9P1Y6 1649 aaKnown RBP22.99■■□□□ 1.27
COL13A1-205ENST00000398978 MAP7D2Q96T17 732 aa22.99■■□□□ 1.27
COL13A1-205ENST00000398978 AFDNP55196 1824 aaKnown RBP22.98■■□□□ 1.27
COL13A1-205ENST00000398978 ADD1P35611 737 aaKnown RBP22.98■■□□□ 1.27
COL13A1-205ENST00000398978 DHX32Q7L7V1 743 aaKnown RBP22.98■■□□□ 1.27
COL13A1-205ENST00000398978 DCAF5Q96JK2 942 aa22.98■■□□□ 1.27
COL13A1-205ENST00000398978 HMGN5P82970 282 aaKnown RBP22.97■■□□□ 1.27
COL13A1-205ENST00000398978 GJB4Q9NTQ9 266 aa22.97■■□□□ 1.27
COL13A1-205ENST00000398978 HSPD1P10809 573 aaKnown RBP22.97■■□□□ 1.27
COL13A1-205ENST00000398978 PLBD2Q8NHP8 589 aa22.97■■□□□ 1.27
COL13A1-205ENST00000398978 E7EWF7 191 aa22.97■■□□□ 1.27
COL13A1-205ENST00000398978 CLIP2Q9UDT6 1046 aa22.97■■□□□ 1.27
COL13A1-205ENST00000398978 M0R2C6 588 aa22.96■■□□□ 1.27
COL13A1-205ENST00000398978 PFKFB2O60825 505 aa22.96■■□□□ 1.27
COL13A1-205ENST00000398978 IFIT1P09914 478 aaKnown RBP22.96■■□□□ 1.27
COL13A1-205ENST00000398978 MRC1P22897 1456 aa22.96■■□□□ 1.27
COL13A1-205ENST00000398978 C1orf167Q5SNV9 1468 aa22.96■■□□□ 1.27
COL13A1-205ENST00000398978 CACTINQ8WUQ7 758 aaKnown RBP22.95■■□□□ 1.27
COL13A1-205ENST00000398978 ZSCAN25Q6NSZ9 544 aa22.95■■□□□ 1.26
COL13A1-205ENST00000398978 MAST3O60307 1309 aa22.95■■□□□ 1.26
COL13A1-205ENST00000398978 A0A1B0GUL7 405 aa22.95■■□□□ 1.26
COL13A1-205ENST00000398978 ME1P48163 572 aa22.95■■□□□ 1.26
COL13A1-205ENST00000398978 RBM43Q6ZSC3 357 aaKnown RBP22.95■■□□□ 1.26
COL13A1-205ENST00000398978 PLA2G4DQ86XP0 818 aa22.95■■□□□ 1.26
COL13A1-205ENST00000398978 SMARCC2Q8TAQ2 1214 aa22.95■■□□□ 1.26
COL13A1-205ENST00000398978 CFAP45Q9UL16 551 aa22.95■■□□□ 1.26
COL13A1-205ENST00000398978 SCN11AQ9UI33 1791 aa22.94■■□□□ 1.26
COL13A1-205ENST00000398978 CBX1P83916 185 aa22.94■■□□□ 1.26
COL13A1-205ENST00000398978 ADORA1P30542 326 aa22.94■■□□□ 1.26
COL13A1-205ENST00000398978 PI16Q6UXB8 463 aa22.94■■□□□ 1.26
COL13A1-205ENST00000398978 NAA30Q147X3 362 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms