RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 SCAND2PQ9GZW5 306 aaPredicted RBP23.09■■□□□ 1.29
COL13A1-205ENST00000398978 SNRPA1P09661 255 aaKnown RBP23.08■■□□□ 1.29
COL13A1-205ENST00000398978 KIAA1524Q8TCG1 905 aa23.08■■□□□ 1.29
COL13A1-205ENST00000398978 HMG20BQ9P0W2 317 aa23.08■■□□□ 1.29
COL13A1-205ENST00000398978 TRIM5Q9C035 493 aa23.08■■□□□ 1.29
COL13A1-205ENST00000398978 MCMDC2Q4G0Z9 681 aa23.07■■□□□ 1.28
COL13A1-205ENST00000398978 CCDC85AQ96PX6 553 aaPredicted RBP23.07■■□□□ 1.28
COL13A1-205ENST00000398978 MEGF6O75095 1541 aa23.07■■□□□ 1.28
COL13A1-205ENST00000398978 ZNF710Q8N1W2 664 aa23.07■■□□□ 1.28
COL13A1-205ENST00000398978 RESTQ13127 1097 aa23.07■■□□□ 1.28
COL13A1-205ENST00000398978 USPL1Q5W0Q7 1092 aa23.06■■□□□ 1.28
COL13A1-205ENST00000398978 TTLL7Q6ZT98 887 aa23.06■■□□□ 1.28
COL13A1-205ENST00000398978 IFNL2Q8IZJ0 200 aa23.06■■□□□ 1.28
COL13A1-205ENST00000398978 ELP1O95163 1332 aa23.06■■□□□ 1.28
COL13A1-205ENST00000398978 PRDM10Q9NQV6 1147 aa23.06■■□□□ 1.28
COL13A1-205ENST00000398978 RAB11FIP4Q86YS3 637 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 SPTLC3Q9NUV7 552 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 CABP4P57796 275 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 LRRC24Q50LG9 513 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 TTLL5Q6EMB2 1281 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 CLSTN2Q9H4D0 955 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 GPHNQ9NQX3 736 aaPredicted RBP23.05■■□□□ 1.28
COL13A1-205ENST00000398978 ZNF330Q9Y3S2 320 aaPredicted RBP23.05■■□□□ 1.28
COL13A1-205ENST00000398978 HSP90AB3PQ58FF7 597 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 HAUS7Q99871 368 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 ZBTB3Q9H5J0 574 aa23.05■■□□□ 1.28
COL13A1-205ENST00000398978 ZNF165P49910 485 aa23.04■■□□□ 1.28
COL13A1-205ENST00000398978 SIPA1L3O60292 1781 aaPredicted RBP23.04■■□□□ 1.28
COL13A1-205ENST00000398978 TSGA10IPQ3SY00 556 aa23.04■■□□□ 1.28
COL13A1-205ENST00000398978 FMNL2Q96PY5 1086 aa23.04■■□□□ 1.28
COL13A1-205ENST00000398978 U3KPZ7 1027 aaPredicted RBP23.03■■□□□ 1.28
COL13A1-205ENST00000398978 CTDNEP1O95476 244 aa23.03■■□□□ 1.28
COL13A1-205ENST00000398978 KRT32Q14532 448 aa23.03■■□□□ 1.28
COL13A1-205ENST00000398978 SLIT3O75094 1523 aa23.03■■□□□ 1.28
COL13A1-205ENST00000398978 OVOS2A0A0G2JMS6 1433 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 NBPF26B4DH59 902 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 A1BGP04217 495 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 NBPF14Q5TI25 921 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 OTUD7BQ6GQQ9 843 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 NBPF10Q6P3W6 841 aaKnown RBP23.02■■□□□ 1.28
COL13A1-205ENST00000398978 NBPF15Q8N660 670 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 PUS3Q9BZE2 481 aaKnown RBP23.02■■□□□ 1.28
COL13A1-205ENST00000398978 JCADQ9P266 1359 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 RIOK3O14730 519 aaKnown RBP23.02■■□□□ 1.28
COL13A1-205ENST00000398978 KBTBD3Q8NAB2 608 aa23.02■■□□□ 1.28
COL13A1-205ENST00000398978 DDX19AQ9NUU7 478 aaKnown RBP23.02■■□□□ 1.28
COL13A1-205ENST00000398978 HAND2P61296 217 aa23.01■■□□□ 1.27
COL13A1-205ENST00000398978 RABL6Q3YEC7 729 aaPredicted RBP23.01■■□□□ 1.27
COL13A1-205ENST00000398978 C16orf45Q96MC5 204 aaPredicted RBP23.01■■□□□ 1.27
COL13A1-205ENST00000398978 PAG1Q9NWQ8 432 aa23.01■■□□□ 1.27
COL13A1-205ENST00000398978 PTPDC1A2A3K4 754 aa23.01■■□□□ 1.27
COL13A1-205ENST00000398978 ARID5BQ14865 1188 aa23.01■■□□□ 1.27
COL13A1-205ENST00000398978 C11orf57Q6ZUT1 292 aaPredicted RBP23.01■■□□□ 1.27
COL13A1-205ENST00000398978 NSUN7Q8NE18 718 aaKnown RBP23.01■■□□□ 1.27
COL13A1-205ENST00000398978 GOLPH3LQ9H4A5 285 aa23.01■■□□□ 1.27
COL13A1-205ENST00000398978 GOLGA6L6A8MZA4 724 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 CASP7P55210 303 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 ATG9AQ7Z3C6 839 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 PRIMPOLQ96LW4 560 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 ALDH8A1Q9H2A2 487 aaPredicted RBP23■■□□□ 1.27
COL13A1-205ENST00000398978 FOXO4P98177 505 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 USP28Q96RU2 1077 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 BCL2L12Q9HB09 334 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 KIF3AQ9Y496 699 aa23■■□□□ 1.27
COL13A1-205ENST00000398978 ZNF75DP51815 510 aa22.99■■□□□ 1.27
COL13A1-205ENST00000398978 FKBP4Q02790 459 aaKnown RBP eCLIP22.99■■□□□ 1.27
COL13A1-205ENST00000398978 CCDC144BQ3MJ40 725 aa22.99■■□□□ 1.27
COL13A1-205ENST00000398978 CCAR1Q8IX12 1150 aaKnown RBP22.99■■□□□ 1.27
COL13A1-205ENST00000398978 CCDC144CPQ8IYA2 1237 aa22.99■■□□□ 1.27
COL13A1-205ENST00000398978 PHRF1Q9P1Y6 1649 aaKnown RBP22.99■■□□□ 1.27
COL13A1-205ENST00000398978 MAP7D2Q96T17 732 aa22.99■■□□□ 1.27
COL13A1-205ENST00000398978 AFDNP55196 1824 aaKnown RBP22.98■■□□□ 1.27
COL13A1-205ENST00000398978 ADD1P35611 737 aaKnown RBP22.98■■□□□ 1.27
COL13A1-205ENST00000398978 DHX32Q7L7V1 743 aaKnown RBP22.98■■□□□ 1.27
COL13A1-205ENST00000398978 DCAF5Q96JK2 942 aa22.98■■□□□ 1.27
COL13A1-205ENST00000398978 HMGN5P82970 282 aaKnown RBP22.97■■□□□ 1.27
COL13A1-205ENST00000398978 GJB4Q9NTQ9 266 aa22.97■■□□□ 1.27
COL13A1-205ENST00000398978 HSPD1P10809 573 aaKnown RBP22.97■■□□□ 1.27
COL13A1-205ENST00000398978 PLBD2Q8NHP8 589 aa22.97■■□□□ 1.27
COL13A1-205ENST00000398978 E7EWF7 191 aa22.97■■□□□ 1.27
COL13A1-205ENST00000398978 CLIP2Q9UDT6 1046 aa22.97■■□□□ 1.27
COL13A1-205ENST00000398978 M0R2C6 588 aa22.96■■□□□ 1.27
COL13A1-205ENST00000398978 PFKFB2O60825 505 aa22.96■■□□□ 1.27
COL13A1-205ENST00000398978 IFIT1P09914 478 aaKnown RBP22.96■■□□□ 1.27
COL13A1-205ENST00000398978 MRC1P22897 1456 aa22.96■■□□□ 1.27
COL13A1-205ENST00000398978 C1orf167Q5SNV9 1468 aa22.96■■□□□ 1.27
COL13A1-205ENST00000398978 CACTINQ8WUQ7 758 aaKnown RBP22.95■■□□□ 1.27
COL13A1-205ENST00000398978 ZSCAN25Q6NSZ9 544 aa22.95■■□□□ 1.26
COL13A1-205ENST00000398978 MAST3O60307 1309 aa22.95■■□□□ 1.26
COL13A1-205ENST00000398978 A0A1B0GUL7 405 aa22.95■■□□□ 1.26
COL13A1-205ENST00000398978 ME1P48163 572 aa22.95■■□□□ 1.26
COL13A1-205ENST00000398978 RBM43Q6ZSC3 357 aaKnown RBP22.95■■□□□ 1.26
COL13A1-205ENST00000398978 PLA2G4DQ86XP0 818 aa22.95■■□□□ 1.26
COL13A1-205ENST00000398978 SMARCC2Q8TAQ2 1214 aa22.95■■□□□ 1.26
COL13A1-205ENST00000398978 CFAP45Q9UL16 551 aa22.95■■□□□ 1.26
COL13A1-205ENST00000398978 SCN11AQ9UI33 1791 aa22.94■■□□□ 1.26
COL13A1-205ENST00000398978 CBX1P83916 185 aa22.94■■□□□ 1.26
COL13A1-205ENST00000398978 ADORA1P30542 326 aa22.94■■□□□ 1.26
COL13A1-205ENST00000398978 PI16Q6UXB8 463 aa22.94■■□□□ 1.26
COL13A1-205ENST00000398978 NAA30Q147X3 362 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms