RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 MAEAQ7L5Y9 396 aa12.83□□□□□ -0.36
RGPD2-201ENST00000398146 FAM114A1Q8IWE2 563 aa12.83□□□□□ -0.36
RGPD2-201ENST00000398146 TRAF1Q13077 416 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 BIRC3Q13489 604 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 JADE2Q9NQC1 790 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 FNDC3AQ9Y2H6 1198 aaKnown RBP12.82□□□□□ -0.36
RGPD2-201ENST00000398146 GLRX3O76003 335 aaKnown RBP12.82□□□□□ -0.36
RGPD2-201ENST00000398146 MX1P20591 662 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 STAT6P42226 847 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 TSTA3Q13630 321 aaPredicted RBP12.82□□□□□ -0.36
RGPD2-201ENST00000398146 TTC12Q9H892 705 aaPredicted RBP12.82□□□□□ -0.36
RGPD2-201ENST00000398146 CCDC169A6NNP5 214 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 ANXA1P04083 346 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 C6orf163Q5TEZ5 329 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 MIGA1Q8NAN2 632 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 FAM193BQ96PV7 902 aaPredicted RBP12.82□□□□□ -0.36
RGPD2-201ENST00000398146 TTC36A6NLP5 189 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 CCDC172P0C7W6 258 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 GADL1Q6ZQY3 521 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 SPAG5Q96R06 1193 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 MCM9Q9NXL9 1143 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 ANKRD50Q9ULJ7 1429 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 MAGEB6P1A0A0J9YX57 407 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 MAP3K11Q16584 847 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 MSANTD4Q8NCY6 345 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 LRRC27Q9C0I9 530 aa12.82□□□□□ -0.36
RGPD2-201ENST00000398146 ANKRD30BQ9BXX2 1392 aa12.81□□□□□ -0.36
RGPD2-201ENST00000398146 K7ELQ4 463 aaPredicted RBP12.81□□□□□ -0.36
RGPD2-201ENST00000398146 CCDC24Q8N4L8 307 aa12.81□□□□□ -0.36
RGPD2-201ENST00000398146 HELBQ8NG08 1087 aaPredicted RBP12.81□□□□□ -0.36
RGPD2-201ENST00000398146 CCNL1Q9UK58 526 aaPredicted RBP12.81□□□□□ -0.36
RGPD2-201ENST00000398146 FAM107BQ9H098 131 aa12.81□□□□□ -0.36
RGPD2-201ENST00000398146 ANAPC4Q9UJX5 808 aa12.81□□□□□ -0.36
RGPD2-201ENST00000398146 UFL1O94874 794 aa12.81□□□□□ -0.36
RGPD2-201ENST00000398146 FCHSD1Q86WN1 690 aa12.81□□□□□ -0.36
RGPD2-201ENST00000398146 MKRN3Q13064 507 aaKnown RBP12.81□□□□□ -0.36
RGPD2-201ENST00000398146 MAPK8IP2Q13387 824 aaPredicted RBP12.81□□□□□ -0.36
RGPD2-201ENST00000398146 TMCO4Q5TGY1 634 aa12.81□□□□□ -0.36
RGPD2-201ENST00000398146 RRP36Q96EU6 259 aaKnown RBP12.81□□□□□ -0.36
RGPD2-201ENST00000398146 PDE3AQ14432 1141 aa12.81□□□□□ -0.36
RGPD2-201ENST00000398146 PPME1Q9Y570 386 aa12.81□□□□□ -0.36
RGPD2-201ENST00000398146 RAB11FIP3O75154 756 aa12.81□□□□□ -0.36
RGPD2-201ENST00000398146 SLC39A6Q13433 755 aa12.81□□□□□ -0.36
RGPD2-201ENST00000398146 UIMC1Q96RL1 719 aa12.81□□□□□ -0.36
RGPD2-201ENST00000398146 SRRTQ9BXP5 876 aaKnown RBP12.81□□□□□ -0.36
RGPD2-201ENST00000398146 GPCPD1Q9NPB8 672 aa12.81□□□□□ -0.36
RGPD2-201ENST00000398146 STK24Q9Y6E0 443 aa12.81□□□□□ -0.36
RGPD2-201ENST00000398146 CCDC66A2RUB6 948 aa12.8□□□□□ -0.36
RGPD2-201ENST00000398146 URI1O94763 535 aaPredicted RBP12.8□□□□□ -0.36
RGPD2-201ENST00000398146 GMNNO75496 209 aa12.8□□□□□ -0.36
RGPD2-201ENST00000398146 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
RGPD2-201ENST00000398146 FBXO31Q5XUX0 539 aaPredicted RBP12.8□□□□□ -0.36
RGPD2-201ENST00000398146 NIM1KQ8IY84 436 aa12.8□□□□□ -0.36
RGPD2-201ENST00000398146 CPXCR1Q8N123 301 aa12.8□□□□□ -0.36
RGPD2-201ENST00000398146 PARD3BQ8TEW8 1205 aa12.8□□□□□ -0.36
RGPD2-201ENST00000398146 E7EVH7 732 aa12.8□□□□□ -0.36
RGPD2-201ENST00000398146 RSPH3Q86UC2 560 aa12.8□□□□□ -0.36
RGPD2-201ENST00000398146 FAM98CQ17RN3 349 aaKnown RBP12.8□□□□□ -0.36
RGPD2-201ENST00000398146 H7C1D1 291 aa12.8□□□□□ -0.36
RGPD2-201ENST00000398146 HSP90AA4PQ58FG1 418 aa12.8□□□□□ -0.36
RGPD2-201ENST00000398146 CNBD1Q8NA66 436 aa12.8□□□□□ -0.36
RGPD2-201ENST00000398146 FBF1Q8TES7 1133 aa12.8□□□□□ -0.36
RGPD2-201ENST00000398146 PLIN2Q99541 437 aa12.8□□□□□ -0.36
RGPD2-201ENST00000398146 AGTPBP1Q9UPW5 1226 aa12.8□□□□□ -0.36
RGPD2-201ENST00000398146 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.79□□□□□ -0.36
RGPD2-201ENST00000398146 TCP10Q12799 353 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 PPFIA1Q13136 1202 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 RRAGBQ5VZM2 374 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 FNBP1Q96RU3 617 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 PPANQ9NQ55 473 aaKnown RBP12.79□□□□□ -0.36
RGPD2-201ENST00000398146 CCDC160A6NGH7 325 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 KRT19P08727 400 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 UAP1Q16222 522 aaPredicted RBP12.79□□□□□ -0.36
RGPD2-201ENST00000398146 KIF9Q9HAQ2 790 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 CCDC87Q9NVE4 849 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 DBF4Q9UBU7 674 aaPredicted RBP12.79□□□□□ -0.36
RGPD2-201ENST00000398146 SYNJ2O15056 1496 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 LDHBP07195 334 aaKnown RBP12.79□□□□□ -0.36
RGPD2-201ENST00000398146 NAA15Q9BXJ9 866 aaKnown RBP12.79□□□□□ -0.36
RGPD2-201ENST00000398146 NR1I2O75469 434 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 UQCRFS1P1P0C7P4 283 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 CFAP157Q5JU67 520 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 HMGB1P09429 215 aaKnown RBP12.79□□□□□ -0.36
RGPD2-201ENST00000398146 SNRPA1P09661 255 aaKnown RBP12.79□□□□□ -0.36
RGPD2-201ENST00000398146 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 CSADQ9Y600 493 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 SFPQP23246 707 aaKnown RBP eCLIP12.79□□□□□ -0.36
RGPD2-201ENST00000398146 NCOA7Q8NI08 942 aa12.79□□□□□ -0.36
RGPD2-201ENST00000398146 MRE11P49959 708 aa12.78□□□□□ -0.36
RGPD2-201ENST00000398146 TRPC3Q13507 836 aa12.78□□□□□ -0.36
RGPD2-201ENST00000398146 MED10Q9BTT4 135 aa12.78□□□□□ -0.36
RGPD2-201ENST00000398146 ERCC5P28715 1186 aaPredicted RBP12.78□□□□□ -0.36
RGPD2-201ENST00000398146 SMIM23A6NLE4 172 aa12.78□□□□□ -0.36
RGPD2-201ENST00000398146 ASIC1P78348 528 aa12.78□□□□□ -0.36
RGPD2-201ENST00000398146 METTL13Q8N6R0 699 aa12.78□□□□□ -0.36
RGPD2-201ENST00000398146 UBXN4Q92575 508 aa12.78□□□□□ -0.36
RGPD2-201ENST00000398146 GTPBP4Q9BZE4 634 aaKnown RBP12.78□□□□□ -0.36
RGPD2-201ENST00000398146 AZI2Q9H6S1 392 aa12.78□□□□□ -0.36
RGPD2-201ENST00000398146 MAP9Q49MG5 647 aa12.78□□□□□ -0.36
RGPD2-201ENST00000398146 NSMCE1Q8WV22 266 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms