RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 ANO10Q9NW15 660 aa17.21■□□□□ 0.34
RAPGEF4-201ENST00000397081 URI1O94763 535 aaPredicted RBP17.2■□□□□ 0.34
RAPGEF4-201ENST00000397081 TIMM10P62072 90 aa17.2■□□□□ 0.34
RAPGEF4-201ENST00000397081 UBR1Q8IWV7 1749 aa17.2■□□□□ 0.34
RAPGEF4-201ENST00000397081 SYT10Q6XYQ8 523 aa17.2■□□□□ 0.34
RAPGEF4-201ENST00000397081 RALYLQ86SE5 291 aaKnown RBP17.2■□□□□ 0.34
RAPGEF4-201ENST00000397081 ZFP91Q96JP5 570 aaPredicted RBP17.2■□□□□ 0.34
RAPGEF4-201ENST00000397081 SASH1O94885 1247 aa17.2■□□□□ 0.34
RAPGEF4-201ENST00000397081 ZSCAN20P17040 1043 aaPredicted RBP17.2■□□□□ 0.34
RAPGEF4-201ENST00000397081 POLA2Q14181 598 aa17.2■□□□□ 0.34
RAPGEF4-201ENST00000397081 CFAP100Q494V2 611 aa17.2■□□□□ 0.34
RAPGEF4-201ENST00000397081 ZSWIM4Q9H7M6 989 aa17.2■□□□□ 0.34
RAPGEF4-201ENST00000397081 IGSF1Q8N6C5 1336 aa17.2■□□□□ 0.34
RAPGEF4-201ENST00000397081 NCBP1Q09161 790 aaKnown RBP17.19■□□□□ 0.34
RAPGEF4-201ENST00000397081 PGBD1Q96JS3 809 aa17.19■□□□□ 0.34
RAPGEF4-201ENST00000397081 SNW1Q13573 536 aaKnown RBP17.19■□□□□ 0.34
RAPGEF4-201ENST00000397081 MAP4K1Q92918 833 aa17.19■□□□□ 0.34
RAPGEF4-201ENST00000397081 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.19■□□□□ 0.34
RAPGEF4-201ENST00000397081 NPHP4O75161 1426 aaPredicted RBP17.19■□□□□ 0.34
RAPGEF4-201ENST00000397081 RXRAP19793 462 aa17.19■□□□□ 0.34
RAPGEF4-201ENST00000397081 USP28Q96RU2 1077 aa17.19■□□□□ 0.34
RAPGEF4-201ENST00000397081 IFNKQ9P0W0 207 aa17.19■□□□□ 0.34
RAPGEF4-201ENST00000397081 DLC1Q96QB1 1528 aa17.19■□□□□ 0.34
RAPGEF4-201ENST00000397081 SKIDA1Q1XH10 827 aa17.18■□□□□ 0.34
RAPGEF4-201ENST00000397081 KRT28Q7Z3Y7 464 aa17.18■□□□□ 0.34
RAPGEF4-201ENST00000397081 LINS1Q8NG48 757 aa17.18■□□□□ 0.34
RAPGEF4-201ENST00000397081 TTC21AQ8NDW8 1320 aa17.18■□□□□ 0.34
RAPGEF4-201ENST00000397081 PAXBP1Q9Y5B6 917 aa17.18■□□□□ 0.34
RAPGEF4-201ENST00000397081 ARHGEF10O15013 1369 aa17.18■□□□□ 0.34
RAPGEF4-201ENST00000397081 CABLES1Q8TDN4 633 aa17.18■□□□□ 0.34
RAPGEF4-201ENST00000397081 SPTLC3Q9NUV7 552 aa17.18■□□□□ 0.34
RAPGEF4-201ENST00000397081 USP6P35125 1406 aa17.18■□□□□ 0.34
RAPGEF4-201ENST00000397081 USP32Q8NFA0 1604 aa17.18■□□□□ 0.34
RAPGEF4-201ENST00000397081 TCHHQ07283 1943 aa17.18■□□□□ 0.34
RAPGEF4-201ENST00000397081 NFXL1Q6ZNB6 911 aa17.18■□□□□ 0.34
RAPGEF4-201ENST00000397081 DNAI1Q9UI46 699 aa17.18■□□□□ 0.34
RAPGEF4-201ENST00000397081 TM6SF1Q9BZW5 370 aa17.17■□□□□ 0.34
RAPGEF4-201ENST00000397081 ST3GAL1Q11201 340 aa17.17■□□□□ 0.34
RAPGEF4-201ENST00000397081 LMBR1LQ6UX01 489 aa17.16■□□□□ 0.34
RAPGEF4-201ENST00000397081 NFATC2IPQ8NCF5 419 aa17.16■□□□□ 0.34
RAPGEF4-201ENST00000397081 C8orf76Q96K31 380 aa17.16■□□□□ 0.34
RAPGEF4-201ENST00000397081 CEP170BQ9Y4F5 1589 aaPredicted RBP17.16■□□□□ 0.34
RAPGEF4-201ENST00000397081 GTPBP4Q9BZE4 634 aaKnown RBP17.16■□□□□ 0.34
RAPGEF4-201ENST00000397081 GJB4Q9NTQ9 266 aa17.16■□□□□ 0.34
RAPGEF4-201ENST00000397081 TOB2Q14106 344 aaPredicted RBP17.16■□□□□ 0.34
RAPGEF4-201ENST00000397081 UBXN4Q92575 508 aa17.16■□□□□ 0.34
RAPGEF4-201ENST00000397081 LRRC8AQ8IWT6 810 aa17.16■□□□□ 0.34
RAPGEF4-201ENST00000397081 OGFRQ9NZT2 677 aa17.16■□□□□ 0.34
RAPGEF4-201ENST00000397081 U3KPZ7 1027 aaPredicted RBP17.16■□□□□ 0.34
RAPGEF4-201ENST00000397081 SCRN1Q12765 414 aa17.15■□□□□ 0.34
RAPGEF4-201ENST00000397081 SLC3A2P08195 630 aaKnown RBP17.15■□□□□ 0.34
RAPGEF4-201ENST00000397081 GTF2F1P35269 517 aaKnown RBP eCLIP17.15■□□□□ 0.34
RAPGEF4-201ENST00000397081 ERCC6LQ2NKX8 1250 aa17.15■□□□□ 0.34
RAPGEF4-201ENST00000397081 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
RAPGEF4-201ENST00000397081 GOLGA8FQ08AF8 430 aa17.15■□□□□ 0.34
RAPGEF4-201ENST00000397081 GOLGA8DPQ0D2H9 430 aa17.15■□□□□ 0.34
RAPGEF4-201ENST00000397081 MCMDC2Q4G0Z9 681 aa17.15■□□□□ 0.34
RAPGEF4-201ENST00000397081 KRT222Q8N1A0 295 aa17.15■□□□□ 0.34
RAPGEF4-201ENST00000397081 KNDC1Q76NI1 1749 aa17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 GOLGA8BA8MQT2 603 aa17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 ALDH1L1O75891 902 aa17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 CYP21A2P08686 494 aa17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 IFIT1P09914 478 aaKnown RBP17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 CHMP4CQ96CF2 233 aa17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 FUCA2Q9BTY2 467 aa17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 C19orf44Q9H6X5 657 aa17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 GPHNQ9NQX3 736 aaPredicted RBP17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 ANKRD13DQ6ZTN6 518 aa17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 ZSCAN16Q9H4T2 348 aaPredicted RBP17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 HMG20BQ9P0W2 317 aa17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 PES1O00541 588 aaKnown RBP17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 TECPR2O15040 1411 aa17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 TAF5LO75529 589 aa17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 TRDNQ13061 729 aa17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 RRP12Q5JTH9 1297 aaKnown RBP17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 ANKRD24Q8TF21 1146 aa17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 ORC3Q9UBD5 711 aaPredicted RBP17.14■□□□□ 0.33
RAPGEF4-201ENST00000397081 RNMTO43148 476 aaKnown RBP17.13■□□□□ 0.33
RAPGEF4-201ENST00000397081 GIGYF1O75420 1035 aaPredicted RBP17.13■□□□□ 0.33
RAPGEF4-201ENST00000397081 ZNF594Q96JF6 807 aaPredicted RBP17.13■□□□□ 0.33
RAPGEF4-201ENST00000397081 CHRNA2Q15822 529 aa17.13■□□□□ 0.33
RAPGEF4-201ENST00000397081 AKAP4Q5JQC9 854 aa17.13■□□□□ 0.33
RAPGEF4-201ENST00000397081 EPHA10Q5JZY3 1008 aa17.13■□□□□ 0.33
RAPGEF4-201ENST00000397081 ST7Q9NRC1 585 aa17.13■□□□□ 0.33
RAPGEF4-201ENST00000397081 DBNLQ9UJU6 430 aaKnown RBP17.13■□□□□ 0.33
RAPGEF4-201ENST00000397081 TEX35Q5T0J7 233 aa17.13■□□□□ 0.33
RAPGEF4-201ENST00000397081 SLU7O95391 586 aaKnown RBP17.12■□□□□ 0.33
RAPGEF4-201ENST00000397081 MRPS27Q92552 414 aaKnown RBP17.12■□□□□ 0.33
RAPGEF4-201ENST00000397081 NRXN3Q9Y4C0 1643 aa17.12■□□□□ 0.33
RAPGEF4-201ENST00000397081 KLF18A0A0U1RQI7 1052 aa17.12■□□□□ 0.33
RAPGEF4-201ENST00000397081 ZBTB22O15209 634 aa17.12■□□□□ 0.33
RAPGEF4-201ENST00000397081 TNNT3P45378 269 aaPredicted RBP17.12■□□□□ 0.33
RAPGEF4-201ENST00000397081 ARHGAP29Q52LW3 1261 aa17.12■□□□□ 0.33
RAPGEF4-201ENST00000397081 CPLX3Q8WVH0 158 aa17.11■□□□□ 0.33
RAPGEF4-201ENST00000397081 XPO4Q9C0E2 1151 aaKnown RBP17.11■□□□□ 0.33
RAPGEF4-201ENST00000397081 VGLL3A8MV65 326 aa17.11■□□□□ 0.33
RAPGEF4-201ENST00000397081 TNNI3KQ59H18 835 aa17.11■□□□□ 0.33
RAPGEF4-201ENST00000397081 FEZ1Q99689 392 aa17.11■□□□□ 0.33
RAPGEF4-201ENST00000397081 FPGT-TNNI3KV9GXZ4 949 aa17.11■□□□□ 0.33
RAPGEF4-201ENST00000397081 TRIM29Q14134 588 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms