RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 KLRG2A4D1S0 409 aaPredicted RBP15.52■□□□□ 0.08
TRIM39-204ENST00000396548 SERPINB2P05120 415 aa15.52■□□□□ 0.08
TRIM39-204ENST00000396548 SLC15A2Q16348 729 aa15.52■□□□□ 0.08
TRIM39-204ENST00000396548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.52■□□□□ 0.08
TRIM39-204ENST00000396548 NLRP3Q96P20 1036 aa15.52■□□□□ 0.08
TRIM39-204ENST00000396548 CNNM1Q9NRU3 951 aa15.52■□□□□ 0.08
TRIM39-204ENST00000396548 CRY2Q49AN0 593 aa15.52■□□□□ 0.08
TRIM39-204ENST00000396548 METTL24Q5JXM2 366 aa15.52■□□□□ 0.08
TRIM39-204ENST00000396548 HAUS7Q99871 368 aa15.52■□□□□ 0.08
TRIM39-204ENST00000396548 TRIM6-TRIM34B2RNG4 842 aa15.52■□□□□ 0.07
TRIM39-204ENST00000396548 ADORA1P30542 326 aa15.52■□□□□ 0.07
TRIM39-204ENST00000396548 RBM25P49756 843 aaKnown RBP15.52■□□□□ 0.07
TRIM39-204ENST00000396548 CNTROBQ8N137 903 aa15.52■□□□□ 0.07
TRIM39-204ENST00000396548 CCDC24Q8N4L8 307 aa15.52■□□□□ 0.07
TRIM39-204ENST00000396548 CNBD1Q8NA66 436 aa15.52■□□□□ 0.07
TRIM39-204ENST00000396548 RILPL2Q969X0 211 aa15.52■□□□□ 0.07
TRIM39-204ENST00000396548 BSDC1Q9NW68 430 aaPredicted RBP15.52■□□□□ 0.07
TRIM39-204ENST00000396548 LRRC37AA6NMS7 1700 aa15.51■□□□□ 0.07
TRIM39-204ENST00000396548 MFAP1P55081 439 aaKnown RBP15.51■□□□□ 0.07
TRIM39-204ENST00000396548 EVI5LQ96CN4 794 aa15.51■□□□□ 0.07
TRIM39-204ENST00000396548 XAGE2Q96GT9 111 aa15.51■□□□□ 0.07
TRIM39-204ENST00000396548 CELF1Q92879 486 aaKnown RBP15.51■□□□□ 0.07
TRIM39-204ENST00000396548 CDC5LQ99459 802 aaKnown RBP15.51■□□□□ 0.07
TRIM39-204ENST00000396548 IL25Q9H293 177 aa15.51■□□□□ 0.07
TRIM39-204ENST00000396548 COL11A2P13942 1736 aaPredicted RBP15.51■□□□□ 0.07
TRIM39-204ENST00000396548 GTF2E1P29083 439 aaPredicted RBP15.5■□□□□ 0.07
TRIM39-204ENST00000396548 NLGN1Q8N2Q7 840 aa15.5■□□□□ 0.07
TRIM39-204ENST00000396548 ZNF512BQ96KM6 892 aaPredicted RBP15.5■□□□□ 0.07
TRIM39-204ENST00000396548 ESYT1Q9BSJ8 1104 aa15.5■□□□□ 0.07
TRIM39-204ENST00000396548 BOLA2Q9H3K6 86 aa15.5■□□□□ 0.07
TRIM39-204ENST00000396548 IGHMBP2P38935 993 aaKnown RBP15.5■□□□□ 0.07
TRIM39-204ENST00000396548 ATP2B3Q16720 1220 aa15.5■□□□□ 0.07
TRIM39-204ENST00000396548 NEUROD6Q96NK8 337 aa15.5■□□□□ 0.07
TRIM39-204ENST00000396548 LTBP1Q14766 1721 aa15.49■□□□□ 0.07
TRIM39-204ENST00000396548 PUM3Q15397 648 aaKnown RBP15.49■□□□□ 0.07
TRIM39-204ENST00000396548 MPHOSPH8Q99549 860 aa15.49■□□□□ 0.07
TRIM39-204ENST00000396548 C22orf23Q9BZE7 217 aa15.49■□□□□ 0.07
TRIM39-204ENST00000396548 RFX7Q2KHR2 1363 aa15.49■□□□□ 0.07
TRIM39-204ENST00000396548 CHRNDQ07001 517 aa15.49■□□□□ 0.07
TRIM39-204ENST00000396548 DEFB132Q7Z7B7 95 aa15.49■□□□□ 0.07
TRIM39-204ENST00000396548 ANKRD18AQ8IVF6 992 aa15.49■□□□□ 0.07
TRIM39-204ENST00000396548 USP26Q9BXU7 913 aa15.49■□□□□ 0.07
TRIM39-204ENST00000396548 SNRKQ9NRH2 765 aa15.48■□□□□ 0.07
TRIM39-204ENST00000396548 DOCK2Q92608 1830 aa15.48■□□□□ 0.07
TRIM39-204ENST00000396548 LPIN2Q92539 896 aa15.48■□□□□ 0.07
TRIM39-204ENST00000396548 MINPP1Q9UNW1 487 aa15.48■□□□□ 0.07
TRIM39-204ENST00000396548 BAG6P46379 1132 aa15.48■□□□□ 0.07
TRIM39-204ENST00000396548 CASC1Q6TDU7 716 aa15.48■□□□□ 0.07
TRIM39-204ENST00000396548 KIF2CQ99661 725 aa15.48■□□□□ 0.07
TRIM39-204ENST00000396548 CCDC125Q86Z20 511 aa15.47■□□□□ 0.07
TRIM39-204ENST00000396548 HELBQ8NG08 1087 aaPredicted RBP15.47■□□□□ 0.07
TRIM39-204ENST00000396548 EDC3Q96F86 508 aaKnown RBP15.47■□□□□ 0.07
TRIM39-204ENST00000396548 MYH7P12883 1935 aa15.47■□□□□ 0.07
TRIM39-204ENST00000396548 EIF5BO60841 1220 aaKnown RBP15.47■□□□□ 0.07
TRIM39-204ENST00000396548 TAF5LO75529 589 aa15.47■□□□□ 0.07
TRIM39-204ENST00000396548 RPS8P62241 208 aaKnown RBP15.47■□□□□ 0.07
TRIM39-204ENST00000396548 ST5P78524 1137 aa15.47■□□□□ 0.07
TRIM39-204ENST00000396548 TICAM2Q86XR7 235 aa15.47■□□□□ 0.07
TRIM39-204ENST00000396548 UPF2Q9HAU5 1272 aaKnown RBP15.47■□□□□ 0.07
TRIM39-204ENST00000396548 NDUFB9Q9Y6M9 179 aa15.47■□□□□ 0.07
TRIM39-204ENST00000396548 ARID4AP29374 1257 aaPredicted RBP15.46■□□□□ 0.07
TRIM39-204ENST00000396548 HOXA10P31260 410 aaPredicted RBP15.46■□□□□ 0.07
TRIM39-204ENST00000396548 IRS2Q9Y4H2 1338 aa15.46■□□□□ 0.07
TRIM39-204ENST00000396548 MYO5AQ9Y4I1 1855 aaKnown RBP15.46■□□□□ 0.07
TRIM39-204ENST00000396548 SGSM2O43147 1006 aa15.46■□□□□ 0.07
TRIM39-204ENST00000396548 SCARF1Q14162 830 aa15.46■□□□□ 0.07
TRIM39-204ENST00000396548 STK32BQ9NY57 414 aa15.46■□□□□ 0.07
TRIM39-204ENST00000396548 SNAP23O00161 211 aa15.45■□□□□ 0.06
TRIM39-204ENST00000396548 GRAPQ13588 217 aa15.45■□□□□ 0.06
TRIM39-204ENST00000396548 GRAPLQ8TC17 118 aaPredicted RBP15.45■□□□□ 0.06
TRIM39-204ENST00000396548 WTIPA6NIX2 430 aaPredicted RBP15.44■□□□□ 0.06
TRIM39-204ENST00000396548 EPB41L2O43491 1005 aaKnown RBP15.44■□□□□ 0.06
TRIM39-204ENST00000396548 ANP32AP39687 249 aaKnown RBP15.44■□□□□ 0.06
TRIM39-204ENST00000396548 CCDC158Q5M9N0 1113 aa15.44■□□□□ 0.06
TRIM39-204ENST00000396548 DDX46Q7L014 1031 aaKnown RBP15.44■□□□□ 0.06
TRIM39-204ENST00000396548 MMP10P09238 476 aa15.44■□□□□ 0.06
TRIM39-204ENST00000396548 IFIT1P09914 478 aaKnown RBP15.44■□□□□ 0.06
TRIM39-204ENST00000396548 MCAMP43121 646 aa15.44■□□□□ 0.06
TRIM39-204ENST00000396548 SF3B2Q13435 895 aaKnown RBP15.44■□□□□ 0.06
TRIM39-204ENST00000396548 CCDC102BQ68D86 513 aa15.44■□□□□ 0.06
TRIM39-204ENST00000396548 IL17RAQ96F46 866 aa15.44■□□□□ 0.06
TRIM39-204ENST00000396548 BRIP1Q9BX63 1249 aa15.44■□□□□ 0.06
TRIM39-204ENST00000396548 PAG1Q9NWQ8 432 aa15.44■□□□□ 0.06
TRIM39-204ENST00000396548 KBTBD3Q8NAB2 608 aa15.44■□□□□ 0.06
TRIM39-204ENST00000396548 IPO9Q96P70 1041 aaKnown RBP15.44■□□□□ 0.06
TRIM39-204ENST00000396548 ZNF804BA4D1E1 1349 aa15.43■□□□□ 0.06
TRIM39-204ENST00000396548 ZBTB22O15209 634 aa15.43■□□□□ 0.06
TRIM39-204ENST00000396548 SLC5A1P13866 664 aa15.43■□□□□ 0.06
TRIM39-204ENST00000396548 PHKA1P46020 1223 aa15.43■□□□□ 0.06
TRIM39-204ENST00000396548 UBE4AQ14139 1066 aa15.43■□□□□ 0.06
TRIM39-204ENST00000396548 SLC51AQ86UW1 340 aa15.43■□□□□ 0.06
TRIM39-204ENST00000396548 MED23Q9ULK4 1368 aa15.43■□□□□ 0.06
TRIM39-204ENST00000396548 REC8O95072 547 aa15.43■□□□□ 0.06
TRIM39-204ENST00000396548 TTC39AQ5SRH9 613 aa15.43■□□□□ 0.06
TRIM39-204ENST00000396548 KIF13BQ9NQT8 1826 aa15.43■□□□□ 0.06
TRIM39-204ENST00000396548 DLEC1Q9Y238 1755 aa15.43■□□□□ 0.06
TRIM39-204ENST00000396548 HIP1O00291 1037 aa15.42■□□□□ 0.06
TRIM39-204ENST00000396548 MSH5O43196 834 aa15.42■□□□□ 0.06
TRIM39-204ENST00000396548 DNAJC2Q99543 621 aaKnown RBP15.42■□□□□ 0.06
TRIM39-204ENST00000396548 PDGFDQ9GZP0 370 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms