RNA–Protein interactions for RNA: ENST00000395856.3

NCOA1-203, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-203ENST00000395856 SELENOOQ9BVL4 669 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 RBM28Q9NW13 759 aaKnown RBP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 CABP1Q9NZU7 370 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 STK38LQ9Y2H1 464 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 USP16Q9Y5T5 823 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 USH1CQ9Y6N9 552 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 ZFYP08048 801 aaPredicted RBP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 MCM7P33993 719 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 KRT9P35527 623 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 ZNF165P49910 485 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 METAP2P50579 478 aaKnown RBP eCLIP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 AAMPQ13685 434 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 PDE3AQ14432 1141 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 CAVIN4Q5BKX8 364 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 CCDC122Q5T0U0 273 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 RPGRQ92834 1020 aaKnown RBP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 ARHGEF2Q92974 986 aaKnown RBP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 CCDC94Q9BW85 323 aaPredicted RBP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 SAMD15Q9P1V8 674 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 CIZ1Q9ULV3 898 aaPredicted RBP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 TPX2Q9ULW0 747 aaKnown RBP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 TBCAO75347 108 aaKnown RBP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 GPTP24298 496 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 HSPA1LP34931 641 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 CCDC174Q6PII3 467 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 MGARPQ8TDB4 240 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 C8orf37Q96NL8 207 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 UIMC1Q96RL1 719 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 TRIM7Q9C029 511 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 SUDS3Q9H7L9 328 aaPredicted RBP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 TMOD2Q9NZR1 351 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 SBNO2Q9Y2G9 1366 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 F8W031 263 aaPredicted RBP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 UBXN1Q04323 297 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 C17orf53Q8N3J3 647 aaPredicted RBP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 GSDMBQ8TAX9 411 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 DHX58Q96C10 678 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 SCAND2PQ9GZW5 306 aaPredicted RBP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 SLC12A5Q9H2X9 1139 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 PHAXQ9H814 394 aaKnown RBP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 KAT14Q9H8E8 782 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 CECR2Q9BXF3 1484 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 GOLGA6L9A6NEM1 432 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 LACTBP83111 547 aaPredicted RBP4.56□□□□□ -1.68
NCOA1-203ENST00000395856 LRSAM1Q6UWE0 723 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 FERMT1Q9BQL6 677 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 STK32BQ9NY57 414 aa4.56□□□□□ -1.68
NCOA1-203ENST00000395856 CASQ2O14958 399 aaPredicted RBP4.55□□□□□ -1.68
NCOA1-203ENST00000395856 CTAGE5O15320 804 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 FAM13AO94988 1023 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 GBP1P32455 592 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 PRKG1Q13976 671 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 CHST3Q7LGC8 479 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 FAM76AQ8TAV0 307 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 ZNF622Q969S3 477 aaKnown RBP eCLIP4.55□□□□□ -1.689e-7■■■□□ 16.8
NCOA1-203ENST00000395856 RASSF4Q9H2L5 321 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 PKD2L1Q9P0L9 805 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 CTNND2Q9UQB3 1225 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 A0A1B0GUL7 405 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 DTNBO60941 627 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 CETN1Q12798 172 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 KIF5AQ12840 1032 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 IFI16Q16666 785 aaKnown RBP4.55□□□□□ -1.68
NCOA1-203ENST00000395856 EHMT1Q9H9B1 1298 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 TCP11L1Q9NUJ3 509 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 DDX19AQ9NUU7 478 aaKnown RBP4.55□□□□□ -1.68
NCOA1-203ENST00000395856 LIMCH1Q9UPQ0 1083 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 KRT5P13647 590 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 YY1P25490 414 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 SYKP43405 635 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 PICALMQ13492 652 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 SETDB1Q15047 1291 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 TRIM31Q9BZY9 425 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.55□□□□□ -1.683e-6■□□□□ 8.4
NCOA1-203ENST00000395856 RPGRIP1LQ68CZ1 1315 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 EBAG9O00559 213 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 AMPD3Q01432 767 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 SP4Q02446 784 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 RAPGEF1Q13905 1077 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 DUSP27Q5VZP5 1158 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 TBC1D9Q6ZT07 1266 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 CCT6BQ92526 530 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 RAB34Q9BZG1 259 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 DDX21Q9NR30 783 aaKnown RBP eCLIP4.55□□□□□ -1.68
NCOA1-203ENST00000395856 FAM169AQ9Y6X4 670 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 LMTK3Q96Q04 1460 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 NEMFO60524 1076 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 DCAF17Q5H9S7 520 aaPredicted RBP4.55□□□□□ -1.68
NCOA1-203ENST00000395856 SH2D4BQ5SQS7 431 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 VPS52Q8N1B4 723 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 CXorf38Q8TB03 319 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 MKRN1Q9UHC7 482 aaKnown RBP4.55□□□□□ -1.68
NCOA1-203ENST00000395856 ABT1Q9ULW3 272 aaKnown RBP4.55□□□□□ -1.68
NCOA1-203ENST00000395856 RABGAP1Q9Y3P9 1069 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 TSPY2A6NKD2 308 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 CCT6AP40227 531 aaKnown RBP4.55□□□□□ -1.68
NCOA1-203ENST00000395856 EAPPQ56P03 285 aaPredicted RBP4.55□□□□□ -1.68
NCOA1-203ENST00000395856 AFAP1L1Q8TED9 768 aa4.55□□□□□ -1.68
NCOA1-203ENST00000395856 BICDL2A1A5D9 508 aa4.54□□□□□ -1.68
NCOA1-203ENST00000395856 SLC5A1P13866 664 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms