RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 KHNYNO15037 678 aaKnown RBP7.78□□□□□ -1.16
HMGB1P10-201ENST00000395823 DGAT1O75907 488 aa7.78□□□□□ -1.16
HMGB1P10-201ENST00000395823 RGS20O76081 388 aa7.78□□□□□ -1.16
HMGB1P10-201ENST00000395823 MAPTP10636 758 aaKnown RBP7.78□□□□□ -1.16
HMGB1P10-201ENST00000395823 EDN3P14138 238 aa7.78□□□□□ -1.16
HMGB1P10-201ENST00000395823 GSTT1P30711 240 aa7.78□□□□□ -1.16
HMGB1P10-201ENST00000395823 GJA8P48165 433 aa7.78□□□□□ -1.16
HMGB1P10-201ENST00000395823 FIGNL1Q6PIW4 674 aa7.78□□□□□ -1.16
HMGB1P10-201ENST00000395823 RIPOR1Q6ZS17 1223 aa7.78□□□□□ -1.16
HMGB1P10-201ENST00000395823 DNAJC2Q99543 621 aaKnown RBP7.78□□□□□ -1.16
HMGB1P10-201ENST00000395823 ABCB6Q9NP58 842 aa7.78□□□□□ -1.16
HMGB1P10-201ENST00000395823 SLC35F4A4IF30 521 aa7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 ST8SIA5O15466 376 aa7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 BNIP3LO60238 219 aa7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 MAN1A2O60476 641 aa7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 RARAP10276 462 aa7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 NFKB1P19838 968 aa7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 DNAJA1P31689 397 aaKnown RBP7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 PTSQ03393 145 aa7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 DBN1Q16643 649 aa7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 SLC30A3Q99726 388 aa7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 TRIM56Q9BRZ2 755 aaKnown RBP7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 NUCKS1Q9H1E3 243 aaKnown RBP7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 ATP13A2Q9NQ11 1180 aa7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 KBTBD4Q9NVX7 518 aa7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 DACH1Q9UI36 760 aa7.77□□□□□ -1.17
HMGB1P10-201ENST00000395823 KIF4AO95239 1232 aa7.76□□□□□ -1.17
HMGB1P10-201ENST00000395823 HOXD8P13378 290 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P10-201ENST00000395823 FCGRTP55899 365 aa7.76□□□□□ -1.17
HMGB1P10-201ENST00000395823 PAK2Q13177 524 aa7.76□□□□□ -1.17
HMGB1P10-201ENST00000395823 GNL2Q13823 731 aaKnown RBP7.76□□□□□ -1.17
HMGB1P10-201ENST00000395823 PKDCCQ504Y2 493 aa7.76□□□□□ -1.17
HMGB1P10-201ENST00000395823 FAM177A1Q8N128 213 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P10-201ENST00000395823 ZKSCAN3Q9BRR0 538 aa7.76□□□□□ -1.17
HMGB1P10-201ENST00000395823 NOC4LQ9BVI4 516 aaKnown RBP7.76□□□□□ -1.17
HMGB1P10-201ENST00000395823 OXCT2Q9BYC2 517 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P10-201ENST00000395823 TLR7Q9NYK1 1049 aaKnown RBP7.76□□□□□ -1.17
HMGB1P10-201ENST00000395823 TTF2Q9UNY4 1162 aaKnown RBP7.76□□□□□ -1.17
HMGB1P10-201ENST00000395823 TRAK1Q9UPV9 953 aa7.76□□□□□ -1.17
HMGB1P10-201ENST00000395823 TMEM238LA0A1B0GVL6 79 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 PHF20L1A8MW92 1017 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 MAP3K6O95382 1288 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 FGRP09769 529 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 CD33P20138 364 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 SOX18P35713 384 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 ARID5AQ03989 594 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 SPEM2Q0P670 501 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 LAMC2Q13753 1193 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 DPH6Q7L8W6 267 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 RAB44Q7Z6P3 723 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 MCF2L2Q86YR7 1114 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 CCNJLQ8IV13 435 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 ANKRD24Q8TF21 1146 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 ABHD17AQ96GS6 310 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 LIN7BQ9HAP6 207 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 AAASQ9NRG9 546 aa7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P10-201ENST00000395823 F6X3S4 739 aa7.74□□□□□ -1.17
HMGB1P10-201ENST00000395823 FBXO24O75426 580 aa7.74□□□□□ -1.17
HMGB1P10-201ENST00000395823 TRPA1O75762 1119 aa7.74□□□□□ -1.17
HMGB1P10-201ENST00000395823 ATP2B1P20020 1258 aa7.74□□□□□ -1.17
HMGB1P10-201ENST00000395823 TRIM22Q8IYM9 498 aa7.74□□□□□ -1.17
HMGB1P10-201ENST00000395823 CEP120Q8N960 986 aa7.74□□□□□ -1.17
HMGB1P10-201ENST00000395823 HHIPQ96QV1 700 aa7.74□□□□□ -1.17
HMGB1P10-201ENST00000395823 ADAMTS1Q9UHI8 967 aa7.74□□□□□ -1.17
HMGB1P10-201ENST00000395823 PPM1HQ9ULR3 514 aa7.74□□□□□ -1.17
HMGB1P10-201ENST00000395823 NRG2O14511 850 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P10-201ENST00000395823 GRIA4P48058 902 aa7.73□□□□□ -1.17
HMGB1P10-201ENST00000395823 CCDC155Q8N6L0 562 aa7.73□□□□□ -1.17
HMGB1P10-201ENST00000395823 ARMC5Q96C12 935 aa7.73□□□□□ -1.17
HMGB1P10-201ENST00000395823 GPRASP2Q96D09 838 aa7.73□□□□□ -1.17
HMGB1P10-201ENST00000395823 ZNF837Q96EG3 531 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P10-201ENST00000395823 OSMRQ99650 979 aa7.73□□□□□ -1.17
HMGB1P10-201ENST00000395823 RSRP1Q9BUV0 290 aa7.73□□□□□ -1.17
HMGB1P10-201ENST00000395823 LNPKQ9C0E8 428 aa7.73□□□□□ -1.17
HMGB1P10-201ENST00000395823 MARK1Q9P0L2 795 aa7.73□□□□□ -1.17
HMGB1P10-201ENST00000395823 METTL12A8MUP2 240 aa7.72□□□□□ -1.17
HMGB1P10-201ENST00000395823 NFKBIEO00221 500 aa7.72□□□□□ -1.17
HMGB1P10-201ENST00000395823 GFRA3O60609 400 aa7.72□□□□□ -1.17
HMGB1P10-201ENST00000395823 PSAPP07602 524 aa7.72□□□□□ -1.17
HMGB1P10-201ENST00000395823 GTF2F1P35269 517 aaKnown RBP eCLIP7.72□□□□□ -1.17
HMGB1P10-201ENST00000395823 HYAL2Q12891 473 aa7.72□□□□□ -1.17
HMGB1P10-201ENST00000395823 CCDC85BQ15834 202 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P10-201ENST00000395823 NCAPG2Q86XI2 1143 aa7.72□□□□□ -1.17
HMGB1P10-201ENST00000395823 BHMTQ93088 406 aa7.72□□□□□ -1.17
HMGB1P10-201ENST00000395823 NSUN5Q96P11 429 aaKnown RBP7.72□□□□□ -1.17
HMGB1P10-201ENST00000395823 DZANK1Q9NVP4 752 aa7.72□□□□□ -1.17
HMGB1P10-201ENST00000395823 XRCC5P13010 732 aaKnown RBP7.71□□□□□ -1.18
HMGB1P10-201ENST00000395823 ATF4P18848 351 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P10-201ENST00000395823 PLAURQ03405 335 aa7.71□□□□□ -1.18
HMGB1P10-201ENST00000395823 SPRED3Q2MJR0 410 aa7.71□□□□□ -1.18
HMGB1P10-201ENST00000395823 DHX32Q7L7V1 743 aaKnown RBP7.71□□□□□ -1.18
HMGB1P10-201ENST00000395823 RASGRP4Q8TDF6 673 aa7.71□□□□□ -1.18
HMGB1P10-201ENST00000395823 PNMA5Q96PV4 448 aa7.71□□□□□ -1.18
HMGB1P10-201ENST00000395823 BHLHE41Q9C0J9 482 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P10-201ENST00000395823 AKAP2Q9Y2D5 859 aa7.71□□□□□ -1.18
HMGB1P10-201ENST00000395823 H7C1W4 665 aa7.7□□□□□ -1.18
HMGB1P10-201ENST00000395823 SMARCA5O60264 1052 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P10-201ENST00000395823 CELA3AP09093 270 aa7.7□□□□□ -1.18
HMGB1P10-201ENST00000395823 ITPKAP23677 461 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms