RNA–Protein interactions for RNA: ENST00000395557.4

CCDC112-202, Transcript of coiled-coil domain containing 112, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC112, Length 2,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112-202ENST00000395557 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.91□□□□□ -0.18
CCDC112-202ENST00000395557 RGPD3A6NKT7 1758 aaPredicted RBP13.9□□□□□ -0.18
CCDC112-202ENST00000395557 RGPD4Q7Z3J3 1758 aa13.9□□□□□ -0.18
CCDC112-202ENST00000395557 ST18O60284 1047 aa13.9□□□□□ -0.18
CCDC112-202ENST00000395557 SURF6O75683 361 aaKnown RBP13.9□□□□□ -0.18
CCDC112-202ENST00000395557 PKP1Q13835 747 aa13.9□□□□□ -0.18
CCDC112-202ENST00000395557 POLA2Q14181 598 aa13.9□□□□□ -0.18
CCDC112-202ENST00000395557 FLAD1Q8NFF5 587 aa13.9□□□□□ -0.18
CCDC112-202ENST00000395557 ZBTB7AO95365 584 aa13.89□□□□□ -0.19
CCDC112-202ENST00000395557 RFX5P48382 616 aaPredicted RBP13.89□□□□□ -0.19
CCDC112-202ENST00000395557 CTSWP56202 376 aa13.89□□□□□ -0.19
CCDC112-202ENST00000395557 PRR5LQ6MZQ0 368 aa13.89□□□□□ -0.19
CCDC112-202ENST00000395557 PKNOX2Q96KN3 472 aa13.89□□□□□ -0.19
CCDC112-202ENST00000395557 SEC31BQ9NQW1 1179 aa13.89□□□□□ -0.19
CCDC112-202ENST00000395557 CDHR2Q9BYE9 1310 aa13.89□□□□□ -0.19
CCDC112-202ENST00000395557 PDE8AO60658 829 aa13.89□□□□□ -0.19
CCDC112-202ENST00000395557 REC8O95072 547 aa13.89□□□□□ -0.19
CCDC112-202ENST00000395557 MTX1Q13505 466 aa13.89□□□□□ -0.19
CCDC112-202ENST00000395557 HS1BP3Q53T59 392 aa13.89□□□□□ -0.19
CCDC112-202ENST00000395557 CAVIN1Q6NZI2 390 aaKnown RBP13.89□□□□□ -0.19
CCDC112-202ENST00000395557 TPTE2Q6XPS3 522 aa13.89□□□□□ -0.19
CCDC112-202ENST00000395557 SLC51AQ86UW1 340 aa13.89□□□□□ -0.19
CCDC112-202ENST00000395557 CARMIL3Q8ND23 1372 aa13.89□□□□□ -0.19
CCDC112-202ENST00000395557 ANKRD36CQ5JPF3 1778 aa13.88□□□□□ -0.19
CCDC112-202ENST00000395557 PTPN12Q05209 780 aaKnown RBP13.88□□□□□ -0.19
CCDC112-202ENST00000395557 NLGN1Q8N2Q7 840 aa13.88□□□□□ -0.19
CCDC112-202ENST00000395557 CNBD1Q8NA66 436 aa13.88□□□□□ -0.19
CCDC112-202ENST00000395557 PUS3Q9BZE2 481 aaKnown RBP13.88□□□□□ -0.19
CCDC112-202ENST00000395557 HMMRO75330 724 aa13.87□□□□□ -0.19
CCDC112-202ENST00000395557 CSF1RP07333 972 aa13.87□□□□□ -0.19
CCDC112-202ENST00000395557 ZGPATQ8N5A5 531 aaKnown RBP13.87□□□□□ -0.19
CCDC112-202ENST00000395557 PLA2G12BQ9BX93 195 aa13.87□□□□□ -0.19
CCDC112-202ENST00000395557 ZDHHC9Q9Y397 364 aa13.87□□□□□ -0.19
CCDC112-202ENST00000395557 RGL2O15211 777 aa13.87□□□□□ -0.19
CCDC112-202ENST00000395557 OFD1O75665 1012 aa13.87□□□□□ -0.19
CCDC112-202ENST00000395557 ITGA6P23229 1130 aa13.87□□□□□ -0.19
CCDC112-202ENST00000395557 HMGB2P26583 209 aaKnown RBP13.87□□□□□ -0.19
CCDC112-202ENST00000395557 IL1RAPL2Q9NP60 686 aa13.87□□□□□ -0.19
CCDC112-202ENST00000395557 ATF5Q9Y2D1 282 aaPredicted RBP13.87□□□□□ -0.19
CCDC112-202ENST00000395557 ERC2O15083 957 aa13.86□□□□□ -0.19
CCDC112-202ENST00000395557 NCLP19338 710 aaKnown RBP13.86□□□□□ -0.19
CCDC112-202ENST00000395557 LRRC24Q50LG9 513 aa13.86□□□□□ -0.19
CCDC112-202ENST00000395557 GPT2Q8TD30 523 aa13.86□□□□□ -0.19
CCDC112-202ENST00000395557 PDLIM2Q96JY6 352 aa13.86□□□□□ -0.19
CCDC112-202ENST00000395557 NYXQ9GZU5 481 aa13.86□□□□□ -0.19
CCDC112-202ENST00000395557 RBSNQ9H1K0 784 aa13.86□□□□□ -0.19
CCDC112-202ENST00000395557 OSBPL3Q9H4L5 887 aa13.86□□□□□ -0.19
CCDC112-202ENST00000395557 HDAC5Q9UQL6 1122 aa13.86□□□□□ -0.19
CCDC112-202ENST00000395557 MSNP26038 577 aaKnown RBP13.86□□□□□ -0.19
CCDC112-202ENST00000395557 PRPF40AO75400 957 aaKnown RBP13.85□□□□□ -0.19
CCDC112-202ENST00000395557 CCDC57Q2TAC2 916 aa13.85□□□□□ -0.19
CCDC112-202ENST00000395557 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
CCDC112-202ENST00000395557 COL4A1P02462 1669 aa13.84□□□□□ -0.19
CCDC112-202ENST00000395557 SASH1O94885 1247 aa13.84□□□□□ -0.19
CCDC112-202ENST00000395557 IFIT5Q13325 482 aaKnown RBP13.84□□□□□ -0.19
CCDC112-202ENST00000395557 OS9Q13438 667 aaPredicted RBP13.84□□□□□ -0.19
CCDC112-202ENST00000395557 SLC10A5Q5PT55 438 aa13.84□□□□□ -0.19
CCDC112-202ENST00000395557 PARP3Q9Y6F1 533 aa13.84□□□□□ -0.19
CCDC112-202ENST00000395557 TERF1P54274 439 aa13.84□□□□□ -0.19
CCDC112-202ENST00000395557 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.84□□□□□ -0.19
CCDC112-202ENST00000395557 NLRP3Q96P20 1036 aa13.84□□□□□ -0.19
CCDC112-202ENST00000395557 TAF7LQ5H9L4 462 aa13.83□□□□□ -0.2
CCDC112-202ENST00000395557 CELF1Q92879 486 aaKnown RBP13.83□□□□□ -0.2
CCDC112-202ENST00000395557 NOL7Q9UMY1 257 aaKnown RBP13.83□□□□□ -0.2
CCDC112-202ENST00000395557 PDE1AP54750 535 aa13.83□□□□□ -0.2
CCDC112-202ENST00000395557 TSHZ3Q63HK5 1081 aa13.83□□□□□ -0.2
CCDC112-202ENST00000395557 ATG9AQ7Z3C6 839 aa13.83□□□□□ -0.2
CCDC112-202ENST00000395557 RHPN1Q8TCX5 695 aa13.83□□□□□ -0.2
CCDC112-202ENST00000395557 COPRSQ9NQ92 184 aa13.83□□□□□ -0.2
CCDC112-202ENST00000395557 RBM27Q9P2N5 1060 aaKnown RBP13.83□□□□□ -0.2
CCDC112-202ENST00000395557 ANKRD18BA2A2Z9 1011 aa13.82□□□□□ -0.2
CCDC112-202ENST00000395557 SNAP23O00161 211 aa13.82□□□□□ -0.2
CCDC112-202ENST00000395557 ST5P78524 1137 aa13.82□□□□□ -0.2
CCDC112-202ENST00000395557 G3BP1Q13283 466 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCDC112-202ENST00000395557 CCDC152Q4G0S7 254 aa13.82□□□□□ -0.2
CCDC112-202ENST00000395557 LRSAM1Q6UWE0 723 aa13.82□□□□□ -0.2
CCDC112-202ENST00000395557 HELBQ8NG08 1087 aaPredicted RBP13.82□□□□□ -0.2
CCDC112-202ENST00000395557 WTIPA6NIX2 430 aaPredicted RBP13.81□□□□□ -0.2
CCDC112-202ENST00000395557 ZNF500O60304 480 aaPredicted RBP13.81□□□□□ -0.2
CCDC112-202ENST00000395557 MCM2P49736 904 aa13.81□□□□□ -0.2
CCDC112-202ENST00000395557 TFCP2Q12800 502 aa13.81□□□□□ -0.2
CCDC112-202ENST00000395557 SF3B3Q15393 1217 aaKnown RBP13.81□□□□□ -0.2
CCDC112-202ENST00000395557 LRRCC1Q9C099 1032 aa13.81□□□□□ -0.2
CCDC112-202ENST00000395557 TMEM63CQ9P1W3 806 aa13.81□□□□□ -0.2
CCDC112-202ENST00000395557 SALL3Q9BXA9 1300 aa13.81□□□□□ -0.2
CCDC112-202ENST00000395557 COL24A1Q17RW2 1714 aa13.81□□□□□ -0.2
CCDC112-202ENST00000395557 LDHAL6AQ6ZMR3 332 aa13.81□□□□□ -0.2
CCDC112-202ENST00000395557 TMX3Q96JJ7 454 aa13.81□□□□□ -0.2
CCDC112-202ENST00000395557 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.81□□□□□ -0.2
CCDC112-202ENST00000395557 WWC3Q9ULE0 1092 aa13.81□□□□□ -0.2
CCDC112-202ENST00000395557 DDX60Q8IY21 1712 aaKnown RBP13.81□□□□□ -0.2
CCDC112-202ENST00000395557 EYA2O00167 538 aa13.8□□□□□ -0.2
CCDC112-202ENST00000395557 CUL4AQ13619 759 aa13.8□□□□□ -0.2
CCDC112-202ENST00000395557 TNRC6CQ9HCJ0 1690 aaKnown RBP13.8□□□□□ -0.2
CCDC112-202ENST00000395557 BRD1O95696 1058 aa13.79□□□□□ -0.2
CCDC112-202ENST00000395557 MBD3O95983 291 aa13.79□□□□□ -0.2
CCDC112-202ENST00000395557 NEK4P51957 841 aa13.79□□□□□ -0.2
CCDC112-202ENST00000395557 CCDC8Q9H0W5 538 aaPredicted RBP13.79□□□□□ -0.2
CCDC112-202ENST00000395557 TLR7Q9NYK1 1049 aaKnown RBP13.79□□□□□ -0.2
CCDC112-202ENST00000395557 TAF1P21675 1872 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms