RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 TBC1D9Q6ZT07 1266 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 JMYQ8N9B5 988 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 PRR7Q8TB68 274 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 HVCN1Q96D96 273 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 CRISPLD2Q9H0B8 497 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 HOMER2Q9NSB8 354 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 SNX2O60749 519 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 MYL1P05976 194 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 RPL17P18621 184 aaKnown RBP5.04□□□□□ -1.6
HERC4-204ENST00000395198 SFSWAPQ12872 951 aaKnown RBP5.04□□□□□ -1.6
HERC4-204ENST00000395198 PRPF38BQ5VTL8 546 aaKnown RBP5.04□□□□□ -1.6
HERC4-204ENST00000395198 LLGL2Q6P1M3 1020 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 SKA1Q96BD8 255 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 GJD4Q96KN9 370 aaPredicted RBP5.04□□□□□ -1.6
HERC4-204ENST00000395198 TRIM6Q9C030 488 aaPredicted RBP5.04□□□□□ -1.6
HERC4-204ENST00000395198 CCSER2Q9H7U1 834 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 P4HBP07237 508 aaKnown RBP5.04□□□□□ -1.6
HERC4-204ENST00000395198 MYCLP1P12525 358 aaPredicted RBP5.04□□□□□ -1.6
HERC4-204ENST00000395198 COPAP53621 1224 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 RCAN1P53805 252 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 TTF1Q15361 905 aaPredicted RBP5.04□□□□□ -1.6
HERC4-204ENST00000395198 PARP10Q53GL7 1025 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 WDR45BQ5MNZ6 344 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 PCDHGB7Q9Y5F8 929 aa5.04□□□□□ -1.6
HERC4-204ENST00000395198 PLIN1O60240 522 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 MMEP08473 750 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 HYIQ5T013 277 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 SWT1Q5T5J6 900 aaKnown RBP5.03□□□□□ -1.6
HERC4-204ENST00000395198 MORC1Q86VD1 984 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 RASSF3Q86WH2 238 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 TMEM151BQ8IW70 566 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 UROC1Q96N76 676 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 RRP15Q9Y3B9 282 aaKnown RBP5.03□□□□□ -1.6
HERC4-204ENST00000395198 PRMT3O60678 531 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 MASP1P48740 699 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 UBASH3AP57075 661 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 MCL1Q07820 350 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 PAK2Q13177 524 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 OR8H2Q8N162 312 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 LILRB1Q8NHL6 650 aaPredicted RBP5.03□□□□□ -1.6
HERC4-204ENST00000395198 GPR101Q96P66 508 aaPredicted RBP5.03□□□□□ -1.6
HERC4-204ENST00000395198 SPAG5Q96R06 1193 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 IWS1Q96ST2 819 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 ZNF700Q9H0M5 742 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 CHMP3Q9Y3E7 222 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 GOLGA6L22H0YM25 854 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 STT3AP46977 705 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 MRE11P49959 708 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 SNX16P57768 344 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 UBXN2AP68543 259 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 GSE1Q14687 1217 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 PNMA8AQ86V59 439 aaPredicted RBP5.03□□□□□ -1.6
HERC4-204ENST00000395198 ASB16Q96NS5 453 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 HAUS7Q99871 368 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 NCAPGQ9BPX3 1015 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 SMC4Q9NTJ3 1288 aa5.03□□□□□ -1.6
HERC4-204ENST00000395198 A0A0B4J203 849 aa5.03□□□□□ -1.61
HERC4-204ENST00000395198 MAP3K7O43318 606 aa5.03□□□□□ -1.61
HERC4-204ENST00000395198 SLC4A3P48751 1232 aa5.03□□□□□ -1.61
HERC4-204ENST00000395198 NSUN2Q08J23 767 aaKnown RBP eCLIP5.03□□□□□ -1.61
HERC4-204ENST00000395198 TKFCQ3LXA3 575 aa5.03□□□□□ -1.61
HERC4-204ENST00000395198 FIP1L1Q6UN15 594 aaKnown RBP5.03□□□□□ -1.61
HERC4-204ENST00000395198 KSR2Q6VAB6 950 aa5.03□□□□□ -1.61
HERC4-204ENST00000395198 TTC8Q8TAM2 541 aa5.03□□□□□ -1.61
HERC4-204ENST00000395198 BEGAINQ9BUH8 593 aa5.03□□□□□ -1.61
HERC4-204ENST00000395198 INCENPQ9NQS7 918 aa5.03□□□□□ -1.61
HERC4-204ENST00000395198 FANCLQ9NW38 375 aa5.03□□□□□ -1.61
HERC4-204ENST00000395198 TMOD4Q9NZQ9 345 aa5.03□□□□□ -1.61
HERC4-204ENST00000395198 SARSP49591 514 aaKnown RBP5.02□□□□□ -1.61
HERC4-204ENST00000395198 PRIM1P49642 420 aaKnown RBP5.02□□□□□ -1.61
HERC4-204ENST00000395198 RABL6Q3YEC7 729 aaPredicted RBP5.02□□□□□ -1.61
HERC4-204ENST00000395198 PREPLQ4J6C6 727 aaPredicted RBP5.02□□□□□ -1.61
HERC4-204ENST00000395198 SAPCD2Q86UD0 394 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 KCT2Q8NC54 265 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 TEKT1Q969V4 418 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 PLEKHA5Q9HAU0 1116 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 LIMD1Q9UGP4 676 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 TPCN1Q9ULQ1 816 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 AKR1B10O60218 316 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 NBNO60934 754 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 LETM1O95202 739 aaPredicted RBP5.02□□□□□ -1.61
HERC4-204ENST00000395198 NEFHP12036 1026 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 CASP2P42575 452 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 MAGEA8P43361 318 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 PPP2R5AQ15172 486 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 TSHZ3Q63HK5 1081 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 PPP4R3AQ6IN85 833 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 TRIML1Q8N9V2 468 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 TDRD7Q8NHU6 1098 aaKnown RBP5.02□□□□□ -1.61
HERC4-204ENST00000395198 ERCC4Q92889 916 aaPredicted RBP5.02□□□□□ -1.61
HERC4-204ENST00000395198 C1orf74Q96LT6 269 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 PARP2Q9UGN5 583 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 PAXBP1Q9Y5B6 917 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 TCEA3O75764 348 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 WDR66Q8TBY9 1149 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 NUDT16Q96DE0 195 aaKnown RBP5.02□□□□□ -1.61
HERC4-204ENST00000395198 RPAP3Q9H6T3 665 aaPredicted RBP5.02□□□□□ -1.61
HERC4-204ENST00000395198 SMYD2Q9NRG4 433 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 CEP72Q9P209 647 aa5.02□□□□□ -1.61
HERC4-204ENST00000395198 GTF3C4Q9UKN8 822 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms