RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 KRT83P78385 493 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 DUSP27Q5VZP5 1158 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 C1orf115Q9H7X2 142 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 NKTRP30414 1462 aaKnown RBP8.43□□□□□ -1.06
SYNE2-205ENST00000394768 GNA11P29992 359 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 ZSCAN30Q86W11 494 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 TCHPQ9BT92 498 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 SPINK5Q9NQ38 1064 aaPredicted RBP8.43□□□□□ -1.06
SYNE2-205ENST00000394768 MTUS1Q9ULD2 1270 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 KCNG4Q8TDN1 519 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 NSMCE1Q8WV22 266 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 NOD1Q9Y239 953 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 SMTNP53814 917 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 TAOK1Q7L7X3 1001 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 VCXQ9H320 206 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 SRRTQ9BXP5 876 aaKnown RBP8.43□□□□□ -1.06
SYNE2-205ENST00000394768 GOLGA6CA6NDK9 693 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 GOLGA6BA6NDN3 693 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 GOLGA6DP0CG33 693 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 RILPL1Q5EBL4 403 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 WDR66Q8TBY9 1149 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 NOX5Q96PH1 765 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 GOLGA6AQ9NYA3 693 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 TACC1O75410 805 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 RTEL1Q9NZ71 1219 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 CLEC11AQ9Y240 323 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 PIK3R4Q99570 1358 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 A6NNZ2 444 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 FAM13AO94988 1023 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 TUBB8Q3ZCM7 444 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 IFIT1BQ5T764 474 aaKnown RBP8.42□□□□□ -1.06
SYNE2-205ENST00000394768 ZNF622Q969S3 477 aaKnown RBP eCLIP8.42□□□□□ -1.06
SYNE2-205ENST00000394768 RPUSD2Q8IZ73 545 aaKnown RBP8.42□□□□□ -1.06
SYNE2-205ENST00000394768 URI1O94763 535 aaPredicted RBP8.42□□□□□ -1.06
SYNE2-205ENST00000394768 SETDB1Q15047 1291 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 MPRIPQ6WCQ1 1025 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 PFDN4Q9NQP4 134 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 SATB1Q01826 763 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 SETDB2Q96T68 719 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 ATP6V0A2Q9Y487 856 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 KRT86O43790 486 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 SLC5A4Q9NY91 659 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 STX8Q9UNK0 236 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 FRMD4BQ9Y2L6 1034 aa8.42□□□□□ -1.06
SYNE2-205ENST00000394768 GEN1Q17RS7 908 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 CROCCP2Q86T23 111 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 TICAM2Q86XR7 235 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 GPHNQ9NQX3 736 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-205ENST00000394768 STX10O60499 249 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 WTAPQ15007 396 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 CCDC50Q8IVM0 306 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 VCX3BQ9H321 246 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 TNNT1P13805 278 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 BIN2Q9UBW5 565 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-205ENST00000394768 PLCD3Q8N3E9 789 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 RSPH3Q86UC2 560 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 ARFGAP2Q8N6H7 521 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 RRP36Q96EU6 259 aaKnown RBP8.41□□□□□ -1.06
SYNE2-205ENST00000394768 BCAP29Q9UHQ4 241 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 NSD3Q9BZ95 1437 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 CTAGE9A4FU28 777 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 M0QZ92 97 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 EIF3DO15371 548 aaKnown RBP eCLIP8.41□□□□□ -1.06
SYNE2-205ENST00000394768 STMN1P16949 149 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 ZNF830Q96NB3 372 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-205ENST00000394768 TOM1O60784 492 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 BCAR3O75815 825 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 SH3BGRP55822 239 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-205ENST00000394768 PLS1Q14651 629 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 EPSTI1Q96J88 318 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 CCDC114Q96M63 670 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 MRVI1Q9Y6F6 885 aa8.41□□□□□ -1.06
SYNE2-205ENST00000394768 PTCD1O75127 700 aaKnown RBP8.4□□□□□ -1.06
SYNE2-205ENST00000394768 WDR44Q5JSH3 913 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 SYNJ1O43426 1573 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 GOLGA8CPA6NN73 597 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 PFDN6O15212 129 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 CFAP70Q5T0N1 1121 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 PRPF40BQ6NWY9 871 aaKnown RBP8.4□□□□□ -1.06
SYNE2-205ENST00000394768 RAB11FIP4Q86YS3 637 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 SPC25Q9HBM1 224 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 ARHGEF6Q15052 776 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 CCDC129Q6ZRS4 1044 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 TROQ12816 1431 aaPredicted RBP8.4□□□□□ -1.06
SYNE2-205ENST00000394768 N4BP3O15049 544 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 EEF2P13639 858 aaKnown RBP8.4□□□□□ -1.06
SYNE2-205ENST00000394768 CALCOCO2Q13137 446 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 VPS52Q8N1B4 723 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 ANKRD24Q8TF21 1146 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 TPCN1Q9ULQ1 816 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 CIB2O75838 187 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 SNW1Q13573 536 aaKnown RBP8.4□□□□□ -1.06
SYNE2-205ENST00000394768 IFNL2Q8IZJ0 200 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 MYD88Q99836 296 aa8.4□□□□□ -1.06
SYNE2-205ENST00000394768 C11orf95C9JLR9 678 aaPredicted RBP8.4□□□□□ -1.07
SYNE2-205ENST00000394768 TRPC3Q13507 836 aa8.4□□□□□ -1.07
SYNE2-205ENST00000394768 NUDT16Q96DE0 195 aaKnown RBP8.4□□□□□ -1.07
SYNE2-205ENST00000394768 EXOC7Q9UPT5 735 aa8.4□□□□□ -1.07
SYNE2-205ENST00000394768 TACC3Q9Y6A5 838 aa8.4□□□□□ -1.07
SYNE2-205ENST00000394768 MAST3O60307 1309 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms