RNA–Protein interactions for RNA: ENST00000394684.8

SGMS2-202, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 6,149 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-202ENST00000394684 RNF34Q969K3 372 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 NAP1L3Q99457 506 aaPredicted RBP9.97□□□□□ -0.81
SGMS2-202ENST00000394684 DYNC1I1O14576 645 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 GEN1Q17RS7 908 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 C8orf37Q96NL8 207 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 NEK1Q96PY6 1258 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 NSRP1Q9H0G5 558 aaKnown RBP9.97□□□□□ -0.81
SGMS2-202ENST00000394684 TFCP2L1Q9NZI6 479 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 NAIPQ13075 1403 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 DNMBPQ6XZF7 1577 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 GOLGA6L9A6NEM1 432 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 CRCPO75575 148 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 KRT23Q9C075 422 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 ZC3H12CQ9C0D7 883 aaKnown RBP9.97□□□□□ -0.81
SGMS2-202ENST00000394684 ECHDC1Q9NTX5 307 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 SYNJ2O15056 1496 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 ASIC1P78348 528 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 CHRNA2Q15822 529 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 EP400NLQ6ZTU2 488 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 MKRN1Q9UHC7 482 aaKnown RBP9.97□□□□□ -0.81
SGMS2-202ENST00000394684 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.97□□□□□ -0.81
SGMS2-202ENST00000394684 GJA3Q9Y6H8 435 aa9.97□□□□□ -0.81
SGMS2-202ENST00000394684 ZBTB24O43167 697 aaPredicted RBP9.96□□□□□ -0.81
SGMS2-202ENST00000394684 CYLC1P35663 651 aaPredicted RBP9.96□□□□□ -0.81
SGMS2-202ENST00000394684 GNG11P61952 73 aa9.96□□□□□ -0.81
SGMS2-202ENST00000394684 NAA16Q6N069 864 aaPredicted RBP9.96□□□□□ -0.81
SGMS2-202ENST00000394684 NME9Q86XW9 330 aa9.96□□□□□ -0.81
SGMS2-202ENST00000394684 ESR2Q92731 530 aa9.96□□□□□ -0.81
SGMS2-202ENST00000394684 NSD3Q9BZ95 1437 aa9.96□□□□□ -0.81
SGMS2-202ENST00000394684 MCM5P33992 734 aa9.96□□□□□ -0.81
SGMS2-202ENST00000394684 RBM25P49756 843 aaKnown RBP9.96□□□□□ -0.81
SGMS2-202ENST00000394684 MAK16Q9BXY0 300 aaKnown RBP9.96□□□□□ -0.81
SGMS2-202ENST00000394684 GPHNQ9NQX3 736 aaPredicted RBP9.96□□□□□ -0.81
SGMS2-202ENST00000394684 CGNQ9P2M7 1197 aaKnown RBP9.96□□□□□ -0.81
SGMS2-202ENST00000394684 USP25Q9UHP3 1055 aa9.96□□□□□ -0.81
SGMS2-202ENST00000394684 HFM1A2PYH4 1435 aa9.96□□□□□ -0.81
SGMS2-202ENST00000394684 SNW1Q13573 536 aaKnown RBP9.96□□□□□ -0.81
SGMS2-202ENST00000394684 CFAP157Q5JU67 520 aa9.96□□□□□ -0.81
SGMS2-202ENST00000394684 AMOTL2Q9Y2J4 779 aa9.96□□□□□ -0.81
SGMS2-202ENST00000394684 RIMBP2O15034 1052 aa9.96□□□□□ -0.82
SGMS2-202ENST00000394684 NEMFO60524 1076 aa9.96□□□□□ -0.82
SGMS2-202ENST00000394684 LPXNO60711 386 aa9.96□□□□□ -0.82
SGMS2-202ENST00000394684 GTF2F1P35269 517 aaKnown RBP eCLIP9.96□□□□□ -0.82
SGMS2-202ENST00000394684 GNAQP50148 359 aa9.96□□□□□ -0.82
SGMS2-202ENST00000394684 KLF18A0A0U1RQI7 1052 aa9.96□□□□□ -0.82
SGMS2-202ENST00000394684 PTGS1P23219 599 aa9.96□□□□□ -0.82
SGMS2-202ENST00000394684 PLEKHH1Q9ULM0 1364 aa9.96□□□□□ -0.82
SGMS2-202ENST00000394684 ZBTB43O43298 467 aa9.95□□□□□ -0.82
SGMS2-202ENST00000394684 ZSCAN30Q86W11 494 aa9.95□□□□□ -0.82
SGMS2-202ENST00000394684 NOL3O60936 208 aaKnown RBP9.95□□□□□ -0.82
SGMS2-202ENST00000394684 HARSP12081 509 aaKnown RBP9.95□□□□□ -0.82
SGMS2-202ENST00000394684 SYKP43405 635 aa9.95□□□□□ -0.82
SGMS2-202ENST00000394684 HSP90AA4PQ58FG1 418 aa9.95□□□□□ -0.82
SGMS2-202ENST00000394684 GDPD2Q9HCC8 539 aa9.95□□□□□ -0.82
SGMS2-202ENST00000394684 HSPA4P34932 840 aa9.95□□□□□ -0.82
SGMS2-202ENST00000394684 RTN1Q16799 776 aa9.95□□□□□ -0.82
SGMS2-202ENST00000394684 RPUSD2Q8IZ73 545 aaKnown RBP9.95□□□□□ -0.82
SGMS2-202ENST00000394684 PRG4Q92954 1404 aaPredicted RBP9.95□□□□□ -0.82
SGMS2-202ENST00000394684 BACH2Q9BYV9 841 aa9.95□□□□□ -0.82
SGMS2-202ENST00000394684 ATP6V0A2Q9Y487 856 aa9.95□□□□□ -0.82
SGMS2-202ENST00000394684 TOM1O60784 492 aa9.95□□□□□ -0.82
SGMS2-202ENST00000394684 ATP2A2P16615 1042 aaKnown RBP9.95□□□□□ -0.82
SGMS2-202ENST00000394684 BRDTQ58F21 947 aaPredicted RBP9.95□□□□□ -0.82
SGMS2-202ENST00000394684 HS2ST1Q7LGA3 356 aa9.95□□□□□ -0.82
SGMS2-202ENST00000394684 NACA2Q9H009 215 aa9.95□□□□□ -0.82
SGMS2-202ENST00000394684 SNRPA1P09661 255 aaKnown RBP9.94□□□□□ -0.82
SGMS2-202ENST00000394684 TNNI2P48788 182 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 SLC8A3P57103 927 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 FLIIQ13045 1269 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 NIP7Q9Y221 180 aaKnown RBP eCLIP9.94□□□□□ -0.82
SGMS2-202ENST00000394684 TMTC2Q8N394 836 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 KIFC2Q96AC6 838 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 PSMA7O14818 248 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 GABPAQ06546 454 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 SPOUT1Q5T280 376 aaKnown RBP9.94□□□□□ -0.82
SGMS2-202ENST00000394684 LMBR1Q8WVP7 490 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 SELENOSQ9BQE4 189 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 ALG1Q9BT22 464 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 RIOK3O14730 519 aaKnown RBP9.94□□□□□ -0.82
SGMS2-202ENST00000394684 BMP15O95972 392 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 RRP36Q96EU6 259 aaKnown RBP9.94□□□□□ -0.82
SGMS2-202ENST00000394684 ZFP91Q96JP5 570 aaPredicted RBP9.94□□□□□ -0.82
SGMS2-202ENST00000394684 STMN4Q9H169 189 aaPredicted RBP9.94□□□□□ -0.82
SGMS2-202ENST00000394684 PRDM10Q9NQV6 1147 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 PKD2L1Q9P0L9 805 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 GINS2Q9Y248 185 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 SMIM23A6NLE4 172 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 KRT79Q5XKE5 535 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 GPATCH11Q8N954 259 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 CTAGE1Q96RT6 745 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 PPP1R9BQ96SB3 815 aa9.94□□□□□ -0.82
SGMS2-202ENST00000394684 NSFL1CQ9UNZ2 370 aaKnown RBP9.94□□□□□ -0.82
SGMS2-202ENST00000394684 AKNAQ7Z591 1439 aa9.93□□□□□ -0.82
SGMS2-202ENST00000394684 ZNF165P49910 485 aa9.93□□□□□ -0.82
SGMS2-202ENST00000394684 UBASH3AP57075 661 aa9.93□□□□□ -0.82
SGMS2-202ENST00000394684 SATB1Q01826 763 aa9.93□□□□□ -0.82
SGMS2-202ENST00000394684 SRRTQ9BXP5 876 aaKnown RBP9.93□□□□□ -0.82
SGMS2-202ENST00000394684 CNNM2Q9H8M5 875 aa9.93□□□□□ -0.82
SGMS2-202ENST00000394684 KMT5BQ4FZB7 885 aa9.93□□□□□ -0.82
SGMS2-202ENST00000394684 PPP1R21Q6ZMI0 780 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms