RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 ATG9AQ7Z3C6 839 aa18.46■□□□□ 0.55
PTBP1-204ENST00000394601 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.46■□□□□ 0.55
PTBP1-204ENST00000394601 V9GYY5 206 aaPredicted RBP18.46■□□□□ 0.55
PTBP1-204ENST00000394601 FSD1Q9BTV5 496 aa18.45■□□□□ 0.54
PTBP1-204ENST00000394601 FUCA2Q9BTY2 467 aa18.45■□□□□ 0.54
PTBP1-204ENST00000394601 COL5A2P05997 1499 aaPredicted RBP18.45■□□□□ 0.54
PTBP1-204ENST00000394601 RPS6KB1P23443 525 aa18.45■□□□□ 0.54
PTBP1-204ENST00000394601 TTC5Q8N0Z6 440 aa18.45■□□□□ 0.54
PTBP1-204ENST00000394601 ZBTB9Q96C00 473 aa18.45■□□□□ 0.54
PTBP1-204ENST00000394601 CADPS2Q86UW7 1296 aa18.44■□□□□ 0.54
PTBP1-204ENST00000394601 CSB-PGBD3P0DP91 1061 aa18.44■□□□□ 0.54
PTBP1-204ENST00000394601 DRC7Q8IY82 874 aa18.44■□□□□ 0.54
PTBP1-204ENST00000394601 DBNDD2Q9BQY9 259 aa18.44■□□□□ 0.54
PTBP1-204ENST00000394601 A0A087WZG4 1122 aa18.44■□□□□ 0.54
PTBP1-204ENST00000394601 CABP4P57796 275 aa18.44■□□□□ 0.54
PTBP1-204ENST00000394601 UBE2HP62256 183 aa18.44■□□□□ 0.54
PTBP1-204ENST00000394601 DNM1Q05193 864 aaKnown RBP18.44■□□□□ 0.54
PTBP1-204ENST00000394601 HAUS7Q99871 368 aa18.44■□□□□ 0.54
PTBP1-204ENST00000394601 ZKSCAN1P17029 563 aaPredicted RBP18.43■□□□□ 0.54
PTBP1-204ENST00000394601 NKX1-1Q15270 411 aaPredicted RBP18.43■□□□□ 0.54
PTBP1-204ENST00000394601 RIOK3O14730 519 aaKnown RBP18.43■□□□□ 0.54
PTBP1-204ENST00000394601 TTLL7Q6ZT98 887 aa18.43■□□□□ 0.54
PTBP1-204ENST00000394601 BRINP3Q76B58 766 aa18.43■□□□□ 0.54
PTBP1-204ENST00000394601 TCEANC2Q96MN5 208 aa18.43■□□□□ 0.54
PTBP1-204ENST00000394601 SEC62Q99442 399 aaKnown RBP18.42■□□□□ 0.54
PTBP1-204ENST00000394601 WDR17Q8IZU2 1322 aa18.42■□□□□ 0.54
PTBP1-204ENST00000394601 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.41■□□□□ 0.54
PTBP1-204ENST00000394601 C16orf45Q96MC5 204 aaPredicted RBP18.41■□□□□ 0.54
PTBP1-204ENST00000394601 CCDC183Q5T5S1 534 aa18.41■□□□□ 0.54
PTBP1-204ENST00000394601 LMBR1LQ6UX01 489 aa18.41■□□□□ 0.54
PTBP1-204ENST00000394601 CCDC129Q6ZRS4 1044 aa18.4■□□□□ 0.54
PTBP1-204ENST00000394601 CDC37L1Q7L3B6 337 aa18.4■□□□□ 0.54
PTBP1-204ENST00000394601 HMG20BQ9P0W2 317 aa18.4■□□□□ 0.54
PTBP1-204ENST00000394601 STRCQ7RTU9 1775 aa18.4■□□□□ 0.54
PTBP1-204ENST00000394601 FIBPO43427 364 aa18.4■□□□□ 0.54
PTBP1-204ENST00000394601 PSMA5P28066 241 aa18.4■□□□□ 0.54
PTBP1-204ENST00000394601 SYAP1Q96A49 352 aaPredicted RBP18.4■□□□□ 0.54
PTBP1-204ENST00000394601 PALLDQ8WX93 1383 aa18.4■□□□□ 0.54
PTBP1-204ENST00000394601 MYH15Q9Y2K3 1946 aa18.39■□□□□ 0.53
PTBP1-204ENST00000394601 HMGN5P82970 282 aaKnown RBP18.39■□□□□ 0.53
PTBP1-204ENST00000394601 NWD2Q9ULI1 1742 aa18.39■□□□□ 0.53
PTBP1-204ENST00000394601 PCDH11XQ9BZA7 1347 aa18.39■□□□□ 0.53
PTBP1-204ENST00000394601 PCDH11YQ9BZA8 1340 aa18.39■□□□□ 0.53
PTBP1-204ENST00000394601 SLFNL1Q499Z3 407 aa18.39■□□□□ 0.53
PTBP1-204ENST00000394601 SPEF2Q9C093 1822 aa18.39■□□□□ 0.53
PTBP1-204ENST00000394601 SOS2Q07890 1332 aaPredicted RBP18.39■□□□□ 0.53
PTBP1-204ENST00000394601 ERVV-2B6SEH9 535 aa18.38■□□□□ 0.53
PTBP1-204ENST00000394601 CYP21A2P08686 494 aa18.38■□□□□ 0.53
PTBP1-204ENST00000394601 BLOC1S2Q6QNY1 142 aa18.38■□□□□ 0.53
PTBP1-204ENST00000394601 STOX1Q6ZVD7 989 aa18.38■□□□□ 0.53
PTBP1-204ENST00000394601 A1BGP04217 495 aa18.38■□□□□ 0.53
PTBP1-204ENST00000394601 DDX60Q8IY21 1712 aaKnown RBP18.38■□□□□ 0.53
PTBP1-204ENST00000394601 SH3TC1Q8TE82 1336 aa18.38■□□□□ 0.53
PTBP1-204ENST00000394601 UTP14CQ5TAP6 766 aaKnown RBP18.38■□□□□ 0.53
PTBP1-204ENST00000394601 GIMAP6Q6P9H5 292 aa18.38■□□□□ 0.53
PTBP1-204ENST00000394601 PAXIP1Q6ZW49 1069 aaPredicted RBP18.38■□□□□ 0.53
PTBP1-204ENST00000394601 ZCRB1Q8TBF4 217 aaKnown RBP18.37■□□□□ 0.53
PTBP1-204ENST00000394601 TTC6Q86TZ1 520 aa18.37■□□□□ 0.53
PTBP1-204ENST00000394601 GTPBP4Q9BZE4 634 aaKnown RBP18.37■□□□□ 0.53
PTBP1-204ENST00000394601 TMEM51Q9NW97 253 aa18.37■□□□□ 0.53
PTBP1-204ENST00000394601 PYCARDQ9ULZ3 195 aa18.37■□□□□ 0.53
PTBP1-204ENST00000394601 LETM1O95202 739 aaPredicted RBP18.36■□□□□ 0.53
PTBP1-204ENST00000394601 RNF20Q5VTR2 975 aa18.36■□□□□ 0.53
PTBP1-204ENST00000394601 KBTBD3Q8NAB2 608 aa18.36■□□□□ 0.53
PTBP1-204ENST00000394601 GPR108Q9NPR9 543 aa18.36■□□□□ 0.53
PTBP1-204ENST00000394601 ATP6V1DQ9Y5K8 247 aa18.36■□□□□ 0.53
PTBP1-204ENST00000394601 PHF14O94880 888 aa18.36■□□□□ 0.53
PTBP1-204ENST00000394601 PDIA4P13667 645 aaKnown RBP18.36■□□□□ 0.53
PTBP1-204ENST00000394601 DDX46Q7L014 1031 aaKnown RBP18.36■□□□□ 0.53
PTBP1-204ENST00000394601 KLHL34Q8N239 644 aa18.36■□□□□ 0.53
PTBP1-204ENST00000394601 ANKRD1Q15327 319 aa18.36■□□□□ 0.53
PTBP1-204ENST00000394601 MCMDC2Q4G0Z9 681 aa18.36■□□□□ 0.53
PTBP1-204ENST00000394601 ZFP91Q96JP5 570 aaPredicted RBP18.36■□□□□ 0.53
PTBP1-204ENST00000394601 LRRC24Q50LG9 513 aa18.35■□□□□ 0.53
PTBP1-204ENST00000394601 LARP1BQ659C4 914 aaKnown RBP18.35■□□□□ 0.53
PTBP1-204ENST00000394601 FAM173BQ6P4H8 233 aa18.35■□□□□ 0.53
PTBP1-204ENST00000394601 A0A0G2JLW4 131 aa18.35■□□□□ 0.53
PTBP1-204ENST00000394601 MCM5P33992 734 aa18.35■□□□□ 0.53
PTBP1-204ENST00000394601 PIBF1Q8WXW3 757 aa18.35■□□□□ 0.53
PTBP1-204ENST00000394601 GTF3C6Q969F1 213 aa18.35■□□□□ 0.53
PTBP1-204ENST00000394601 ELP1O95163 1332 aa18.35■□□□□ 0.53
PTBP1-204ENST00000394601 AP5Z1O43299 807 aa18.34■□□□□ 0.53
PTBP1-204ENST00000394601 KIF20AO95235 890 aa18.34■□□□□ 0.53
PTBP1-204ENST00000394601 UVSSAQ2YD98 709 aa18.34■□□□□ 0.53
PTBP1-204ENST00000394601 DNAJC2Q99543 621 aaKnown RBP18.34■□□□□ 0.53
PTBP1-204ENST00000394601 CWC25Q9NXE8 425 aaPredicted RBP18.34■□□□□ 0.53
PTBP1-204ENST00000394601 TIMM10P62072 90 aa18.34■□□□□ 0.53
PTBP1-204ENST00000394601 FAM184AQ8NB25 1140 aa18.34■□□□□ 0.53
PTBP1-204ENST00000394601 ITGB4P16144 1822 aa18.33■□□□□ 0.53
PTBP1-204ENST00000394601 VPS37CA5D8V6 355 aaPredicted RBP18.33■□□□□ 0.53
PTBP1-204ENST00000394601 JAK2O60674 1132 aa18.33■□□□□ 0.53
PTBP1-204ENST00000394601 ZNF594Q96JF6 807 aaPredicted RBP18.33■□□□□ 0.53
PTBP1-204ENST00000394601 NEK1Q96PY6 1258 aa18.33■□□□□ 0.53
PTBP1-204ENST00000394601 FOXP2O15409 715 aa18.33■□□□□ 0.52
PTBP1-204ENST00000394601 CCDC191Q8NCU4 936 aa18.33■□□□□ 0.52
PTBP1-204ENST00000394601 PRIMPOLQ96LW4 560 aa18.33■□□□□ 0.52
PTBP1-204ENST00000394601 ISCA1Q9BUE6 129 aa18.33■□□□□ 0.52
PTBP1-204ENST00000394601 AGXT2Q9BYV1 514 aa18.33■□□□□ 0.52
PTBP1-204ENST00000394601 HSPA2P54652 639 aa18.32■□□□□ 0.52
PTBP1-204ENST00000394601 CARD10Q9BWT7 1032 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 345.8 ms