RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	IFNL1	Q8IU54	200 aa		11.09	□□□□□ -0.63
MITF-205	ENST00000394348	ZNF34	Q8IZ26	560 aa		11.09	□□□□□ -0.63
MITF-205	ENST00000394348	KBTBD3	Q8NAB2	608 aa		11.09	□□□□□ -0.63
MITF-205	ENST00000394348	DBNDD2	Q9BQY9	259 aa		11.09	□□□□□ -0.63
MITF-205	ENST00000394348	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.09	□□□□□ -0.63
MITF-205	ENST00000394348	CEP126	Q9P2H0	1117 aa		11.09	□□□□□ -0.63
MITF-205	ENST00000394348	ISY1	Q9ULR0	285 aa	Known RBP	11.09	□□□□□ -0.63
MITF-205	ENST00000394348	TRPC6	Q9Y210	931 aa		11.09	□□□□□ -0.63
MITF-205	ENST00000394348	BCL9L	Q86UU0	1499 aa		11.08	□□□□□ -0.64
MITF-205	ENST00000394348	LOC102724428	A0A0B4J2F2	783 aa		11.08	□□□□□ -0.64
MITF-205	ENST00000394348	PDIA4	P13667	645 aa	Known RBP	11.08	□□□□□ -0.64
MITF-205	ENST00000394348	PSMA5	P28066	241 aa		11.08	□□□□□ -0.64
MITF-205	ENST00000394348	CTSW	P56202	376 aa		11.08	□□□□□ -0.64
MITF-205	ENST00000394348	SIK1	P57059	783 aa		11.08	□□□□□ -0.64
MITF-205	ENST00000394348	IFIT5	Q13325	482 aa	Known RBP	11.08	□□□□□ -0.64
MITF-205	ENST00000394348	KRT32	Q14532	448 aa		11.08	□□□□□ -0.64
MITF-205	ENST00000394348	USPL1	Q5W0Q7	1092 aa		11.08	□□□□□ -0.64
MITF-205	ENST00000394348	DZIP3	Q86Y13	1208 aa	Known RBP	11.08	□□□□□ -0.64
MITF-205	ENST00000394348	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.08	□□□□□ -0.64
MITF-205	ENST00000394348	SYTL4	Q96C24	671 aa	Predicted RBP	11.08	□□□□□ -0.64
MITF-205	ENST00000394348	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.08	□□□□□ -0.64
MITF-205	ENST00000394348	ZSWIM6	Q9HCJ5	1215 aa		11.08	□□□□□ -0.64
MITF-205	ENST00000394348	RBM8A	Q9Y5S9	174 aa	Known RBP	11.08	□□□□□ -0.64
MITF-205	ENST00000394348	ARAP2	Q8WZ64	1704 aa		11.08	□□□□□ -0.64
MITF-205	ENST00000394348	RIC1	Q4ADV7	1423 aa		11.08	□□□□□ -0.64
MITF-205	ENST00000394348		A0A0D9SFI3	127 aa		11.07	□□□□□ -0.64
MITF-205	ENST00000394348	PDE8A	O60658	829 aa		11.07	□□□□□ -0.64
MITF-205	ENST00000394348	CHRM1	P11229	460 aa	Predicted RBP	11.07	□□□□□ -0.64
MITF-205	ENST00000394348	PTH1R	Q03431	593 aa		11.07	□□□□□ -0.64
MITF-205	ENST00000394348	HLF	Q16534	295 aa		11.07	□□□□□ -0.64
MITF-205	ENST00000394348	CREB3L3	Q68CJ9	461 aa		11.07	□□□□□ -0.64
MITF-205	ENST00000394348	INTS5	Q6P9B9	1019 aa	Known RBP	11.07	□□□□□ -0.64
MITF-205	ENST00000394348	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.07	□□□□□ -0.64
MITF-205	ENST00000394348	FAM227B	Q96M60	508 aa		11.07	□□□□□ -0.64
MITF-205	ENST00000394348	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.07	□□□□□ -0.64
MITF-205	ENST00000394348	HELLS	Q9NRZ9	838 aa		11.07	□□□□□ -0.64
MITF-205	ENST00000394348	LIMCH1	Q9UPQ0	1083 aa		11.07	□□□□□ -0.64
MITF-205	ENST00000394348	CYP46A1	Q9Y6A2	500 aa		11.07	□□□□□ -0.64
MITF-205	ENST00000394348	NHS	Q6T4R5	1651 aa		11.07	□□□□□ -0.64
MITF-205	ENST00000394348		A0A1B0GUL7	405 aa		11.06	□□□□□ -0.64
MITF-205	ENST00000394348	ANKRD18B	A2A2Z9	1011 aa		11.06	□□□□□ -0.64
MITF-205	ENST00000394348	IRS4	O14654	1257 aa	Predicted RBP	11.06	□□□□□ -0.64
MITF-205	ENST00000394348	TRAK2	O60296	914 aa		11.06	□□□□□ -0.64
MITF-205	ENST00000394348	TAF5L	O75529	589 aa		11.06	□□□□□ -0.64
MITF-205	ENST00000394348	BAG4	O95429	457 aa	Known RBP	11.06	□□□□□ -0.64
MITF-205	ENST00000394348	ZFY	P08048	801 aa	Predicted RBP	11.06	□□□□□ -0.64
MITF-205	ENST00000394348	SSFA2	P28290	1259 aa		11.06	□□□□□ -0.64
MITF-205	ENST00000394348	ANKRD1	Q15327	319 aa		11.06	□□□□□ -0.64
MITF-205	ENST00000394348	MCMDC2	Q4G0Z9	681 aa		11.06	□□□□□ -0.64
MITF-205	ENST00000394348	LRRC24	Q50LG9	513 aa		11.06	□□□□□ -0.64
MITF-205	ENST00000394348	TAF7L	Q5H9L4	462 aa		11.06	□□□□□ -0.64
MITF-205	ENST00000394348	PRPF40B	Q6NWY9	871 aa	Known RBP	11.06	□□□□□ -0.64
MITF-205	ENST00000394348	TTLL11	Q8NHH1	800 aa		11.06	□□□□□ -0.64
MITF-205	ENST00000394348	FAM89A	Q96GI7	184 aa		11.06	□□□□□ -0.64
MITF-205	ENST00000394348	PAG1	Q9NWQ8	432 aa		11.06	□□□□□ -0.64
MITF-205	ENST00000394348	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.06	□□□□□ -0.64
MITF-205	ENST00000394348	CNTNAP4	Q9C0A0	1308 aa		11.06	□□□□□ -0.64
MITF-205	ENST00000394348	SCN7A	Q01118	1682 aa		11.05	□□□□□ -0.64
MITF-205	ENST00000394348	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.05	□□□□□ -0.64
MITF-205	ENST00000394348	NUTM2E	B1AL46	878 aa	Predicted RBP	11.05	□□□□□ -0.64
MITF-205	ENST00000394348	UBAP1L	F5GYI3	381 aa		11.05	□□□□□ -0.64
MITF-205	ENST00000394348	SLC27A2	O14975	620 aa		11.05	□□□□□ -0.64
MITF-205	ENST00000394348	BRD1	O95696	1058 aa		11.05	□□□□□ -0.64
MITF-205	ENST00000394348	IFIT1	P09914	478 aa	Known RBP	11.05	□□□□□ -0.64
MITF-205	ENST00000394348	CAST	P20810	708 aa	Known RBP	11.05	□□□□□ -0.64
MITF-205	ENST00000394348	ATP6V1A	P38606	617 aa		11.05	□□□□□ -0.64
MITF-205	ENST00000394348	CRKL	P46109	303 aa	Known RBP	11.05	□□□□□ -0.64
MITF-205	ENST00000394348	CCDC158	Q5M9N0	1113 aa		11.05	□□□□□ -0.64
MITF-205	ENST00000394348	RUFY3	Q7L099	469 aa		11.05	□□□□□ -0.64
MITF-205	ENST00000394348	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.05	□□□□□ -0.64
MITF-205	ENST00000394348	ZGPAT	Q8N5A5	531 aa	Known RBP	11.05	□□□□□ -0.64
MITF-205	ENST00000394348	UPF3B	Q9BZI7	483 aa	Known RBP	11.05	□□□□□ -0.64
MITF-205	ENST00000394348	TRMT112	Q9UI30	125 aa	Known RBP	11.05	□□□□□ -0.64
MITF-205	ENST00000394348	PCDHB8	Q9UN66	801 aa		11.05	□□□□□ -0.64
MITF-205	ENST00000394348	ZNF652	Q9Y2D9	606 aa		11.05	□□□□□ -0.64
MITF-205	ENST00000394348	RIPOR2	Q9Y4F9	1068 aa		11.05	□□□□□ -0.64
MITF-205	ENST00000394348	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.05	□□□□□ -0.64
MITF-205	ENST00000394348	UBN2	Q6ZU65	1347 aa		11.05	□□□□□ -0.64
MITF-205	ENST00000394348	DDX60	Q8IY21	1712 aa	Known RBP	11.04	□□□□□ -0.64
MITF-205	ENST00000394348	CAMTA2	O94983	1202 aa		11.04	□□□□□ -0.64
MITF-205	ENST00000394348	ITGA6	P23229	1130 aa		11.04	□□□□□ -0.64
MITF-205	ENST00000394348	KCNJ4	P48050	445 aa		11.04	□□□□□ -0.64
MITF-205	ENST00000394348	AK2	P54819	239 aa		11.04	□□□□□ -0.64
MITF-205	ENST00000394348	PIP4K2B	P78356	416 aa		11.04	□□□□□ -0.64
MITF-205	ENST00000394348	ZMYM1	Q5SVZ6	1142 aa		11.04	□□□□□ -0.64
MITF-205	ENST00000394348	L1TD1	Q5T7N2	865 aa	Known RBP	11.04	□□□□□ -0.64
MITF-205	ENST00000394348	CLEC4G	Q6UXB4	293 aa		11.04	□□□□□ -0.64
MITF-205	ENST00000394348	JAKMIP1	Q96N16	626 aa	Known RBP	11.04	□□□□□ -0.64
MITF-205	ENST00000394348	NEUROD6	Q96NK8	337 aa		11.04	□□□□□ -0.64
MITF-205	ENST00000394348	DNAJC2	Q99543	621 aa	Known RBP	11.04	□□□□□ -0.64
MITF-205	ENST00000394348	DSCC1	Q9BVC3	393 aa		11.04	□□□□□ -0.64
MITF-205	ENST00000394348	PDRG1	Q9NUG6	133 aa		11.04	□□□□□ -0.64
MITF-205	ENST00000394348	CCDC9	Q9Y3X0	531 aa	Known RBP	11.04	□□□□□ -0.64
MITF-205	ENST00000394348	MYH14	Q7Z406	1995 aa	Known RBP	11.04	□□□□□ -0.64
MITF-205	ENST00000394348	MROH5	Q6ZUA9	1318 aa		11.04	□□□□□ -0.64
MITF-205	ENST00000394348	KAT6B	Q8WYB5	2073 aa		11.04	□□□□□ -0.64
MITF-205	ENST00000394348	GPT	P24298	496 aa		11.03	□□□□□ -0.64
MITF-205	ENST00000394348	ITPK1	Q13572	414 aa		11.03	□□□□□ -0.64
MITF-205	ENST00000394348	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.03	□□□□□ -0.64
MITF-205	ENST00000394348	VGLL2	Q8N8G2	317 aa		11.03	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms