RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 NBPF10Q6P3W6 841 aaKnown RBP11.75□□□□□ -0.53
PSEN1-204ENST00000394164 KRT222Q8N1A0 295 aa11.75□□□□□ -0.53
PSEN1-204ENST00000394164 NBPF15Q8N660 670 aa11.75□□□□□ -0.53
PSEN1-204ENST00000394164 WDR33Q9C0J8 1336 aaKnown RBP11.75□□□□□ -0.53
PSEN1-204ENST00000394164 STX6O43752 255 aa11.74□□□□□ -0.53
PSEN1-204ENST00000394164 CKAP2LQ8IYA6 745 aa11.74□□□□□ -0.53
PSEN1-204ENST00000394164 PTPN12Q05209 780 aaKnown RBP11.74□□□□□ -0.53
PSEN1-204ENST00000394164 CADPS2Q86UW7 1296 aa11.74□□□□□ -0.53
PSEN1-204ENST00000394164 GTF3C6Q969F1 213 aa11.74□□□□□ -0.53
PSEN1-204ENST00000394164 INTS4Q96HW7 963 aaKnown RBP11.74□□□□□ -0.53
PSEN1-204ENST00000394164 TPCN1Q9ULQ1 816 aa11.74□□□□□ -0.53
PSEN1-204ENST00000394164 LMO7Q8WWI1 1683 aa11.74□□□□□ -0.53
PSEN1-204ENST00000394164 SMTNL1A8MU46 457 aa11.73□□□□□ -0.53
PSEN1-204ENST00000394164 EVA1CP58658 441 aa11.73□□□□□ -0.53
PSEN1-204ENST00000394164 DNM1Q05193 864 aaKnown RBP11.73□□□□□ -0.53
PSEN1-204ENST00000394164 HDAC5Q9UQL6 1122 aa11.73□□□□□ -0.53
PSEN1-204ENST00000394164 RPAP1Q9BWH6 1393 aaPredicted RBP11.73□□□□□ -0.53
PSEN1-204ENST00000394164 NCAPD2Q15021 1401 aa11.73□□□□□ -0.53
PSEN1-204ENST00000394164 SLC27A2O14975 620 aa11.73□□□□□ -0.53
PSEN1-204ENST00000394164 ELF2Q15723 593 aa11.73□□□□□ -0.53
PSEN1-204ENST00000394164 SYTL4Q96C24 671 aaPredicted RBP11.73□□□□□ -0.53
PSEN1-204ENST00000394164 SNRKQ9NRH2 765 aa11.73□□□□□ -0.53
PSEN1-204ENST00000394164 ZNF215Q9UL58 517 aaPredicted RBP11.73□□□□□ -0.53
PSEN1-204ENST00000394164 MORC2Q9Y6X9 1032 aaPredicted RBP11.73□□□□□ -0.53
PSEN1-204ENST00000394164 TNNI3KQ59H18 835 aa11.73□□□□□ -0.53
PSEN1-204ENST00000394164 ZCRB1Q8TBF4 217 aaKnown RBP11.73□□□□□ -0.53
PSEN1-204ENST00000394164 CHMP4CQ96CF2 233 aa11.73□□□□□ -0.53
PSEN1-204ENST00000394164 TRIM5Q9C035 493 aa11.73□□□□□ -0.53
PSEN1-204ENST00000394164 TMX1Q9H3N1 280 aa11.73□□□□□ -0.53
PSEN1-204ENST00000394164 FPGT-TNNI3KV9GXZ4 949 aa11.73□□□□□ -0.53
PSEN1-204ENST00000394164 MST1RQ04912 1400 aa11.72□□□□□ -0.53
PSEN1-204ENST00000394164 SLIT3O75094 1523 aa11.72□□□□□ -0.53
PSEN1-204ENST00000394164 GOLIM4O00461 696 aa11.72□□□□□ -0.53
PSEN1-204ENST00000394164 ZSCAN22P10073 491 aaPredicted RBP11.72□□□□□ -0.53
PSEN1-204ENST00000394164 NECTIN1Q15223 517 aa11.72□□□□□ -0.53
PSEN1-204ENST00000394164 TRMT1Q9NXH9 659 aaKnown RBP11.72□□□□□ -0.53
PSEN1-204ENST00000394164 UBE2HP62256 183 aa11.72□□□□□ -0.53
PSEN1-204ENST00000394164 ARID5BQ14865 1188 aa11.72□□□□□ -0.53
PSEN1-204ENST00000394164 LRRC24Q50LG9 513 aa11.72□□□□□ -0.53
PSEN1-204ENST00000394164 HSP90AB3PQ58FF7 597 aa11.72□□□□□ -0.53
PSEN1-204ENST00000394164 BRINP3Q76B58 766 aa11.72□□□□□ -0.53
PSEN1-204ENST00000394164 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.72□□□□□ -0.53
PSEN1-204ENST00000394164 TUBGCP6Q96RT7 1819 aa11.72□□□□□ -0.53
PSEN1-204ENST00000394164 A0A0G2JLW4 131 aa11.71□□□□□ -0.53
PSEN1-204ENST00000394164 USP27XA6NNY8 438 aa11.71□□□□□ -0.53
PSEN1-204ENST00000394164 ST3GAL1Q11201 340 aa11.71□□□□□ -0.53
PSEN1-204ENST00000394164 FBXO38Q6PIJ6 1188 aa11.71□□□□□ -0.53
PSEN1-204ENST00000394164 CHST3Q7LGC8 479 aa11.71□□□□□ -0.53
PSEN1-204ENST00000394164 DDX11Q96FC9 970 aa11.71□□□□□ -0.53
PSEN1-204ENST00000394164 PUS3Q9BZE2 481 aaKnown RBP11.71□□□□□ -0.53
PSEN1-204ENST00000394164 SPATA31A3Q5VYP0 1347 aa11.71□□□□□ -0.53
PSEN1-204ENST00000394164 USP42Q9H9J4 1324 aaKnown RBP11.71□□□□□ -0.53
PSEN1-204ENST00000394164 HSP90B1P14625 803 aaKnown RBP11.71□□□□□ -0.54
PSEN1-204ENST00000394164 CEP135Q66GS9 1140 aa11.71□□□□□ -0.54
PSEN1-204ENST00000394164 BLOC1S2Q6QNY1 142 aa11.71□□□□□ -0.54
PSEN1-204ENST00000394164 LRP10Q7Z4F1 713 aa11.71□□□□□ -0.54
PSEN1-204ENST00000394164 SYNE4Q8N205 404 aa11.71□□□□□ -0.54
PSEN1-204ENST00000394164 TFIP11Q9UBB9 837 aaKnown RBP11.71□□□□□ -0.54
PSEN1-204ENST00000394164 LARP1BQ659C4 914 aaKnown RBP11.7□□□□□ -0.54
PSEN1-204ENST00000394164 MAP4K1Q92918 833 aa11.7□□□□□ -0.54
PSEN1-204ENST00000394164 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
PSEN1-204ENST00000394164 F13A1P00488 732 aa11.7□□□□□ -0.54
PSEN1-204ENST00000394164 GPTP24298 496 aa11.7□□□□□ -0.54
PSEN1-204ENST00000394164 RFX5P48382 616 aaPredicted RBP11.7□□□□□ -0.54
PSEN1-204ENST00000394164 HNRNPH2P55795 449 aaKnown RBP11.7□□□□□ -0.54
PSEN1-204ENST00000394164 USP54Q70EL1 1684 aa11.7□□□□□ -0.54
PSEN1-204ENST00000394164 UTYO14607 1347 aa11.7□□□□□ -0.54
PSEN1-204ENST00000394164 POLR3GO15318 223 aaPredicted RBP11.7□□□□□ -0.54
PSEN1-204ENST00000394164 FKBP4Q02790 459 aaKnown RBP eCLIP11.7□□□□□ -0.54
PSEN1-204ENST00000394164 VPS53Q5VIR6 699 aa11.7□□□□□ -0.54
PSEN1-204ENST00000394164 ZSCAN25Q6NSZ9 544 aa11.7□□□□□ -0.54
PSEN1-204ENST00000394164 FUCA2Q9BTY2 467 aa11.7□□□□□ -0.54
PSEN1-204ENST00000394164 CALCOCO1Q9P1Z2 691 aa11.7□□□□□ -0.54
PSEN1-204ENST00000394164 CCDC192P0DO97 292 aa11.69□□□□□ -0.54
PSEN1-204ENST00000394164 TNNT3P45378 269 aaPredicted RBP11.69□□□□□ -0.54
PSEN1-204ENST00000394164 CEBPZQ03701 1054 aaKnown RBP11.69□□□□□ -0.54
PSEN1-204ENST00000394164 ZNF397Q8NF99 534 aaPredicted RBP11.69□□□□□ -0.54
PSEN1-204ENST00000394164 FAM89AQ96GI7 184 aa11.69□□□□□ -0.54
PSEN1-204ENST00000394164 ADAMTSL3P82987 1691 aa11.69□□□□□ -0.54
PSEN1-204ENST00000394164 C5P01031 1676 aa11.69□□□□□ -0.54
PSEN1-204ENST00000394164 TPM3P06753 285 aa11.69□□□□□ -0.54
PSEN1-204ENST00000394164 RBM6P78332 1123 aaKnown RBP11.69□□□□□ -0.54
PSEN1-204ENST00000394164 CDC37L1Q7L3B6 337 aa11.69□□□□□ -0.54
PSEN1-204ENST00000394164 PLBD2Q8NHP8 589 aa11.69□□□□□ -0.54
PSEN1-204ENST00000394164 CACTINQ8WUQ7 758 aaKnown RBP11.69□□□□□ -0.54
PSEN1-204ENST00000394164 ZNF335Q9H4Z2 1342 aaPredicted RBP11.68□□□□□ -0.54
PSEN1-204ENST00000394164 JAK2O60674 1132 aa11.68□□□□□ -0.54
PSEN1-204ENST00000394164 TAF5LO75529 589 aa11.68□□□□□ -0.54
PSEN1-204ENST00000394164 CCDC144BQ3MJ40 725 aa11.68□□□□□ -0.54
PSEN1-204ENST00000394164 ANO6Q4KMQ2 910 aa11.68□□□□□ -0.54
PSEN1-204ENST00000394164 CCDC144CPQ8IYA2 1237 aa11.68□□□□□ -0.54
PSEN1-204ENST00000394164 NEK11Q8NG66 645 aa11.68□□□□□ -0.54
PSEN1-204ENST00000394164 NOL10Q9BSC4 688 aaKnown RBP11.68□□□□□ -0.54
PSEN1-204ENST00000394164 COPRSQ9NQ92 184 aa11.68□□□□□ -0.54
PSEN1-204ENST00000394164 ASAP1Q9ULH1 1129 aa11.68□□□□□ -0.54
PSEN1-204ENST00000394164 MTMR6Q9Y217 621 aa11.68□□□□□ -0.54
PSEN1-204ENST00000394164 TRPM3Q9HCF6 1732 aaPredicted RBP11.68□□□□□ -0.54
PSEN1-204ENST00000394164 ZNF142P52746 1687 aaPredicted RBP11.68□□□□□ -0.54
PSEN1-204ENST00000394164 IRX3P78415 501 aaPredicted RBP11.68□□□□□ -0.54
PSEN1-204ENST00000394164 CWC25Q9NXE8 425 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms