RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 MCMDC2Q4G0Z9 681 aa8.58□□□□□ -1.04
SMAD1-202ENST00000394092 FOXD4L5Q5VV16 416 aaPredicted RBP8.58□□□□□ -1.04
SMAD1-202ENST00000394092 USPL1Q5W0Q7 1092 aa8.58□□□□□ -1.04
SMAD1-202ENST00000394092 LRSAM1Q6UWE0 723 aa8.58□□□□□ -1.04
SMAD1-202ENST00000394092 CCDC83Q8IWF9 413 aa8.58□□□□□ -1.04
SMAD1-202ENST00000394092 KBTBD3Q8NAB2 608 aa8.58□□□□□ -1.04
SMAD1-202ENST00000394092 FOXD4L4Q8WXT5 416 aaPredicted RBP8.58□□□□□ -1.04
SMAD1-202ENST00000394092 ISCA1Q9BUE6 129 aa8.58□□□□□ -1.04
SMAD1-202ENST00000394092 HELLSQ9NRZ9 838 aa8.58□□□□□ -1.04
SMAD1-202ENST00000394092 KAT6BQ8WYB5 2073 aa8.58□□□□□ -1.04
SMAD1-202ENST00000394092 NUP98P52948 1817 aa8.58□□□□□ -1.04
SMAD1-202ENST00000394092 COL16A1Q07092 1604 aaPredicted RBP8.58□□□□□ -1.04
SMAD1-202ENST00000394092 ABCC12Q96J65 1359 aa8.58□□□□□ -1.04
SMAD1-202ENST00000394092 DOT1LQ8TEK3 1739 aa8.57□□□□□ -1.04
SMAD1-202ENST00000394092 TAF5LO75529 589 aa8.57□□□□□ -1.04
SMAD1-202ENST00000394092 HMGB1P09429 215 aaKnown RBP8.57□□□□□ -1.04
SMAD1-202ENST00000394092 SYT1P21579 422 aa8.57□□□□□ -1.04
SMAD1-202ENST00000394092 RPS6KB1P23443 525 aa8.57□□□□□ -1.04
SMAD1-202ENST00000394092 GJB2P29033 226 aa8.57□□□□□ -1.04
SMAD1-202ENST00000394092 CCDC57Q2TAC2 916 aa8.57□□□□□ -1.04
SMAD1-202ENST00000394092 JARID2Q92833 1246 aaPredicted RBP8.57□□□□□ -1.04
SMAD1-202ENST00000394092 PLA2G12BQ9BX93 195 aa8.57□□□□□ -1.04
SMAD1-202ENST00000394092 PAG1Q9NWQ8 432 aa8.57□□□□□ -1.04
SMAD1-202ENST00000394092 AKAP2Q9Y2D5 859 aa8.57□□□□□ -1.04
SMAD1-202ENST00000394092 PCCAP05165 728 aaPredicted RBP8.56□□□□□ -1.04
SMAD1-202ENST00000394092 ATG9AQ7Z3C6 839 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 ZNF589Q86UQ0 364 aaPredicted RBP8.56□□□□□ -1.04
SMAD1-202ENST00000394092 NEUROD6Q96NK8 337 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 PPP1R9BQ96SB3 815 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 BTG4Q9NY30 223 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 CEP126Q9P2H0 1117 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 CDHR2Q9BYE9 1310 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 BCL9O00512 1426 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 CICQ96RK0 1608 aaPredicted RBP8.56□□□□□ -1.04
SMAD1-202ENST00000394092 KDM4FA0A1W2PPD8 638 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 LETM1O95202 739 aaPredicted RBP8.56□□□□□ -1.04
SMAD1-202ENST00000394092 LARGE1O95461 756 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 IFIT1P09914 478 aaKnown RBP8.56□□□□□ -1.04
SMAD1-202ENST00000394092 CPA1P15085 419 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 UBE2HP62256 183 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 TAF7LQ5H9L4 462 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 CCDC158Q5M9N0 1113 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 ZNF579Q8NAF0 562 aaKnown RBP8.56□□□□□ -1.04
SMAD1-202ENST00000394092 ZBTB38Q8NAP3 1195 aaPredicted RBP8.56□□□□□ -1.04
SMAD1-202ENST00000394092 CHMP4CQ96CF2 233 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 NEK1Q96PY6 1258 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 DSCC1Q9BVC3 393 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 CDCA7Q9BWT1 371 aaPredicted RBP8.56□□□□□ -1.04
SMAD1-202ENST00000394092 TMEM63CQ9P1W3 806 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 MYH15Q9Y2K3 1946 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 MAP3K15Q6ZN16 1313 aa8.56□□□□□ -1.04
SMAD1-202ENST00000394092 NRAPQ86VF7 1730 aa8.55□□□□□ -1.04
SMAD1-202ENST00000394092 ARAP2Q8WZ64 1704 aa8.55□□□□□ -1.04
SMAD1-202ENST00000394092 A0A1B0GUL7 405 aa8.55□□□□□ -1.04
SMAD1-202ENST00000394092 ZFYP08048 801 aaPredicted RBP8.55□□□□□ -1.04
SMAD1-202ENST00000394092 ME3Q16798 604 aa8.55□□□□□ -1.04
SMAD1-202ENST00000394092 GIGYF2Q6Y7W6 1299 aaKnown RBP8.55□□□□□ -1.04
SMAD1-202ENST00000394092 DDX46Q7L014 1031 aaKnown RBP8.55□□□□□ -1.04
SMAD1-202ENST00000394092 USP48Q86UV5 1035 aa8.55□□□□□ -1.04
SMAD1-202ENST00000394092 DNAJC10Q8IXB1 793 aa8.55□□□□□ -1.04
SMAD1-202ENST00000394092 PIGBQ92521 554 aa8.55□□□□□ -1.04
SMAD1-202ENST00000394092 PCDH10Q9P2E7 1040 aa8.55□□□□□ -1.04
SMAD1-202ENST00000394092 ZNF330Q9Y3S2 320 aaPredicted RBP8.55□□□□□ -1.04
SMAD1-202ENST00000394092 SYCE3A1L190 88 aa8.54□□□□□ -1.04
SMAD1-202ENST00000394092 GOLIM4O00461 696 aa8.54□□□□□ -1.04
SMAD1-202ENST00000394092 ZBTB22O15209 634 aa8.54□□□□□ -1.04
SMAD1-202ENST00000394092 PHLPP1O60346 1717 aa8.54□□□□□ -1.04
SMAD1-202ENST00000394092 LAMB2P55268 1798 aa8.54□□□□□ -1.04
SMAD1-202ENST00000394092 IFIT5Q13325 482 aaKnown RBP8.54□□□□□ -1.04
SMAD1-202ENST00000394092 TTC39AQ5SRH9 613 aa8.54□□□□□ -1.04
SMAD1-202ENST00000394092 ZMYM1Q5SVZ6 1142 aa8.54□□□□□ -1.04
SMAD1-202ENST00000394092 CCDC183Q5T5S1 534 aa8.54□□□□□ -1.04
SMAD1-202ENST00000394092 GORABQ5T7V8 394 aa8.54□□□□□ -1.04
SMAD1-202ENST00000394092 FAM184AQ8NB25 1140 aa8.54□□□□□ -1.04
SMAD1-202ENST00000394092 EDC3Q96F86 508 aaKnown RBP8.54□□□□□ -1.04
SMAD1-202ENST00000394092 TSPY26PQ9H489 355 aa8.54□□□□□ -1.04
SMAD1-202ENST00000394092 RBM27Q9P2N5 1060 aaKnown RBP8.54□□□□□ -1.04
SMAD1-202ENST00000394092 TPCN1Q9ULQ1 816 aa8.54□□□□□ -1.04
SMAD1-202ENST00000394092 MTMR6Q9Y217 621 aa8.54□□□□□ -1.04
SMAD1-202ENST00000394092 KIF3AQ9Y496 699 aa8.54□□□□□ -1.04
SMAD1-202ENST00000394092 NWD2Q9ULI1 1742 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 LRP5O75197 1615 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 VPS37CA5D8V6 355 aaPredicted RBP8.53□□□□□ -1.04
SMAD1-202ENST00000394092 EXOC5O00471 708 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 CLCN1P35523 988 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 PRIM1P49642 420 aaKnown RBP8.53□□□□□ -1.04
SMAD1-202ENST00000394092 KRT85P78386 507 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 LRRC24Q50LG9 513 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 HS1BP3Q53T59 392 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 LARP1BQ659C4 914 aaKnown RBP8.53□□□□□ -1.04
SMAD1-202ENST00000394092 ASAP1Q9ULH1 1129 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 RREB1Q92766 1687 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 ESPNB1AK53 854 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 RNF113AO15541 343 aaKnown RBP8.53□□□□□ -1.04
SMAD1-202ENST00000394092 CSF1RP07333 972 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 CYP21A2P08686 494 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 HSP90B1P14625 803 aaKnown RBP8.53□□□□□ -1.04
SMAD1-202ENST00000394092 FGD1P98174 961 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 TOB2Q14106 344 aaPredicted RBP8.53□□□□□ -1.04
SMAD1-202ENST00000394092 GTF3C6Q969F1 213 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms