RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 PDRG1Q9NUG6 133 aa17.19■□□□□ 0.34
RNF41-202ENST00000394013 NWD2Q9ULI1 1742 aa17.18■□□□□ 0.34
RNF41-202ENST00000394013 COL4A1P02462 1669 aa17.18■□□□□ 0.34
RNF41-202ENST00000394013 CDHR2Q9BYE9 1310 aa17.18■□□□□ 0.34
RNF41-202ENST00000394013 HIP1O00291 1037 aa17.18■□□□□ 0.34
RNF41-202ENST00000394013 KCNB2Q92953 911 aa17.18■□□□□ 0.34
RNF41-202ENST00000394013 ZSWIM6Q9HCJ5 1215 aa17.18■□□□□ 0.34
RNF41-202ENST00000394013 CNNM1Q9NRU3 951 aa17.18■□□□□ 0.34
RNF41-202ENST00000394013 EPB41L2O43491 1005 aaKnown RBP17.18■□□□□ 0.34
RNF41-202ENST00000394013 GORABQ5T7V8 394 aa17.18■□□□□ 0.34
RNF41-202ENST00000394013 AMIGO3Q86WK7 504 aa17.18■□□□□ 0.34
RNF41-202ENST00000394013 CCDC83Q8IWF9 413 aa17.18■□□□□ 0.34
RNF41-202ENST00000394013 CWC22Q9HCG8 908 aaKnown RBP17.18■□□□□ 0.34
RNF41-202ENST00000394013 GPR108Q9NPR9 543 aa17.18■□□□□ 0.34
RNF41-202ENST00000394013 ERVV-1B6SEH8 477 aa17.17■□□□□ 0.34
RNF41-202ENST00000394013 ZAP70P43403 619 aa17.17■□□□□ 0.34
RNF41-202ENST00000394013 MCM2P49736 904 aa17.17■□□□□ 0.34
RNF41-202ENST00000394013 NUCB2P80303 420 aa17.17■□□□□ 0.34
RNF41-202ENST00000394013 NIP7Q9Y221 180 aaKnown RBP eCLIP17.17■□□□□ 0.34
RNF41-202ENST00000394013 MYH3P11055 1940 aa17.17■□□□□ 0.34
RNF41-202ENST00000394013 WTIPA6NIX2 430 aaPredicted RBP17.16■□□□□ 0.34
RNF41-202ENST00000394013 TTC39AQ5SRH9 613 aa17.16■□□□□ 0.34
RNF41-202ENST00000394013 BICDL1Q6ZP65 573 aa17.16■□□□□ 0.34
RNF41-202ENST00000394013 LRRC2Q9BYS8 371 aa17.16■□□□□ 0.34
RNF41-202ENST00000394013 USP21Q9UK80 565 aa17.16■□□□□ 0.34
RNF41-202ENST00000394013 TPCN1Q9ULQ1 816 aa17.16■□□□□ 0.34
RNF41-202ENST00000394013 ANKRD18BA2A2Z9 1011 aa17.16■□□□□ 0.34
RNF41-202ENST00000394013 M0R2C6 588 aa17.16■□□□□ 0.34
RNF41-202ENST00000394013 VPS72Q15906 364 aa17.16■□□□□ 0.34
RNF41-202ENST00000394013 ME3Q16798 604 aa17.16■□□□□ 0.34
RNF41-202ENST00000394013 MCMDC2Q4G0Z9 681 aa17.16■□□□□ 0.34
RNF41-202ENST00000394013 C3orf67Q6ZVT6 689 aa17.16■□□□□ 0.34
RNF41-202ENST00000394013 CCDC24Q8N4L8 307 aa17.16■□□□□ 0.34
RNF41-202ENST00000394013 CYP46A1Q9Y6A2 500 aa17.16■□□□□ 0.34
RNF41-202ENST00000394013 PDE8AO60658 829 aa17.15■□□□□ 0.34
RNF41-202ENST00000394013 ATP2B3Q16720 1220 aa17.15■□□□□ 0.34
RNF41-202ENST00000394013 LIMCH1Q9UPQ0 1083 aa17.15■□□□□ 0.34
RNF41-202ENST00000394013 CYP21A2P08686 494 aa17.15■□□□□ 0.34
RNF41-202ENST00000394013 ZKSCAN1P17029 563 aaPredicted RBP17.15■□□□□ 0.34
RNF41-202ENST00000394013 TTLL5Q6EMB2 1281 aa17.15■□□□□ 0.34
RNF41-202ENST00000394013 STOX1Q6ZVD7 989 aa17.15■□□□□ 0.34
RNF41-202ENST00000394013 VGLL2Q8N8G2 317 aa17.15■□□□□ 0.34
RNF41-202ENST00000394013 GDPD2Q9HCC8 539 aa17.15■□□□□ 0.34
RNF41-202ENST00000394013 RPAP1Q9BWH6 1393 aaPredicted RBP17.15■□□□□ 0.34
RNF41-202ENST00000394013 MCAMP43121 646 aa17.14■□□□□ 0.34
RNF41-202ENST00000394013 TPRNQ4KMQ1 711 aa17.14■□□□□ 0.34
RNF41-202ENST00000394013 OSBP2Q969R2 916 aa17.14■□□□□ 0.34
RNF41-202ENST00000394013 NSFL1CQ9UNZ2 370 aaKnown RBP17.14■□□□□ 0.34
RNF41-202ENST00000394013 JCADQ9P266 1359 aa17.14■□□□□ 0.34
RNF41-202ENST00000394013 MAST3O60307 1309 aa17.14■□□□□ 0.33
RNF41-202ENST00000394013 PRPF40AO75400 957 aaKnown RBP17.14■□□□□ 0.33
RNF41-202ENST00000394013 TAF1P21675 1872 aa17.14■□□□□ 0.33
RNF41-202ENST00000394013 MYO5AQ9Y4I1 1855 aaKnown RBP17.14■□□□□ 0.33
RNF41-202ENST00000394013 BRD1O95696 1058 aa17.13■□□□□ 0.33
RNF41-202ENST00000394013 STK3Q13188 491 aa17.13■□□□□ 0.33
RNF41-202ENST00000394013 LMBRD1Q9NUN5 540 aa17.13■□□□□ 0.33
RNF41-202ENST00000394013 SRP68Q9UHB9 627 aaKnown RBP17.13■□□□□ 0.33
RNF41-202ENST00000394013 PHKA1P46020 1223 aa17.13■□□□□ 0.33
RNF41-202ENST00000394013 CCDC158Q5M9N0 1113 aa17.13■□□□□ 0.33
RNF41-202ENST00000394013 UTP14AQ9BVJ6 771 aaKnown RBP17.13■□□□□ 0.33
RNF41-202ENST00000394013 SH3TC1Q8TE82 1336 aa17.13■□□□□ 0.33
RNF41-202ENST00000394013 TOB2Q14106 344 aaPredicted RBP17.12■□□□□ 0.33
RNF41-202ENST00000394013 ZMYM1Q5SVZ6 1142 aa17.12■□□□□ 0.33
RNF41-202ENST00000394013 CLEC17AQ6ZS10 378 aa17.12■□□□□ 0.33
RNF41-202ENST00000394013 GAS2L3Q86XJ1 694 aa17.12■□□□□ 0.33
RNF41-202ENST00000394013 FNBP4Q8N3X1 1017 aaPredicted RBP17.12■□□□□ 0.33
RNF41-202ENST00000394013 INTS4Q96HW7 963 aaKnown RBP17.12■□□□□ 0.33
RNF41-202ENST00000394013 NTSR2O95665 410 aa17.12■□□□□ 0.33
RNF41-202ENST00000394013 NCLP19338 710 aaKnown RBP17.12■□□□□ 0.33
RNF41-202ENST00000394013 IL27Q8NEV9 243 aa17.12■□□□□ 0.33
RNF41-202ENST00000394013 FOXP2O15409 715 aa17.11■□□□□ 0.33
RNF41-202ENST00000394013 RNF113AO15541 343 aaKnown RBP17.11■□□□□ 0.33
RNF41-202ENST00000394013 USPL1Q5W0Q7 1092 aa17.11■□□□□ 0.33
RNF41-202ENST00000394013 TM6SF1Q9BZW5 370 aa17.11■□□□□ 0.33
RNF41-202ENST00000394013 RBM27Q9P2N5 1060 aaKnown RBP17.11■□□□□ 0.33
RNF41-202ENST00000394013 SPEF2Q9C093 1822 aa17.11■□□□□ 0.33
RNF41-202ENST00000394013 TCHHQ07283 1943 aa17.11■□□□□ 0.33
RNF41-202ENST00000394013 RPS6KB1P23443 525 aa17.11■□□□□ 0.33
RNF41-202ENST00000394013 HSPA1LP34931 641 aa17.11■□□□□ 0.33
RNF41-202ENST00000394013 BLOC1S2Q6QNY1 142 aa17.11■□□□□ 0.33
RNF41-202ENST00000394013 CHST3Q7LGC8 479 aa17.11■□□□□ 0.33
RNF41-202ENST00000394013 SLC51AQ86UW1 340 aa17.11■□□□□ 0.33
RNF41-202ENST00000394013 PANK2Q9BZ23 570 aa17.11■□□□□ 0.33
RNF41-202ENST00000394013 PUS7LQ9H0K6 701 aaKnown RBP17.11■□□□□ 0.33
RNF41-202ENST00000394013 AKAP2Q9Y2D5 859 aa17.11■□□□□ 0.33
RNF41-202ENST00000394013 DDX49Q9Y6V7 483 aaKnown RBP17.11■□□□□ 0.33
RNF41-202ENST00000394013 PPFIA3O75145 1194 aa17.1■□□□□ 0.33
RNF41-202ENST00000394013 PDE8BO95263 885 aa17.1■□□□□ 0.33
RNF41-202ENST00000394013 HSPD1P10809 573 aaKnown RBP17.1■□□□□ 0.33
RNF41-202ENST00000394013 WASHC4Q2M389 1173 aa17.1■□□□□ 0.33
RNF41-202ENST00000394013 AKAP11Q9UKA4 1901 aa17.1■□□□□ 0.33
RNF41-202ENST00000394013 GOLGB1Q14789 3259 aaKnown RBP17.1■□□□□ 0.33
RNF41-202ENST00000394013 ERFEQ4G0M1 354 aa17.1■□□□□ 0.33
RNF41-202ENST00000394013 GPT2Q8TD30 523 aa17.1■□□□□ 0.33
RNF41-202ENST00000394013 PIH1D3Q9NQM4 214 aaKnown RBP17.1■□□□□ 0.33
RNF41-202ENST00000394013 DDX60Q8IY21 1712 aaKnown RBP17.1■□□□□ 0.33
RNF41-202ENST00000394013 GJB2P29033 226 aa17.09■□□□□ 0.33
RNF41-202ENST00000394013 HAND2P61296 217 aa17.09■□□□□ 0.33
RNF41-202ENST00000394013 BCL2L12Q9HB09 334 aa17.09■□□□□ 0.33
RNF41-202ENST00000394013 COL5A3P25940 1745 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms