RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 ERCC6LQ2NKX8 1250 aa13.75□□□□□ -0.21
R3HDM2-203ENST00000393811 MRPS27Q92552 414 aaKnown RBP13.75□□□□□ -0.21
R3HDM2-203ENST00000393811 USP28Q96RU2 1077 aa13.75□□□□□ -0.21
R3HDM2-203ENST00000393811 TOB2Q14106 344 aaPredicted RBP13.75□□□□□ -0.21
R3HDM2-203ENST00000393811 ARHGAP29Q52LW3 1261 aa13.75□□□□□ -0.21
R3HDM2-203ENST00000393811 OTUD7BQ6GQQ9 843 aa13.75□□□□□ -0.21
R3HDM2-203ENST00000393811 FAM160A1Q05DH4 1040 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 UBE3BQ7Z3V4 1068 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 RALYLQ86SE5 291 aaKnown RBP13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 TTC5Q8N0Z6 440 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 DDX41Q9UJV9 622 aaKnown RBP13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 ATP5J2-PTCD1G3V325 749 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 PTCD1O75127 700 aaKnown RBP13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 SASH1O94885 1247 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 SLC39A6Q13433 755 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 ZBTB9Q96C00 473 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 CHMP4CQ96CF2 233 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 C8orf76Q96K31 380 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 BABAM1Q9NWV8 329 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 HAND2P61296 217 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 COL9A3Q14050 684 aaPredicted RBP13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 MCMDC2Q4G0Z9 681 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 HSP90AA4PQ58FG1 418 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 MRFAP1L1Q96HT8 127 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 MYO5BQ9ULV0 1848 aa13.74□□□□□ -0.21
R3HDM2-203ENST00000393811 FKBP4Q02790 459 aaKnown RBP eCLIP13.73□□□□□ -0.21
R3HDM2-203ENST00000393811 ESCO1Q5FWF5 840 aa13.73□□□□□ -0.21
R3HDM2-203ENST00000393811 NBPF6Q5VWK0 638 aa13.73□□□□□ -0.21
R3HDM2-203ENST00000393811 NBPF4Q96M43 638 aa13.73□□□□□ -0.21
R3HDM2-203ENST00000393811 PRAMEF22A3QJZ6 481 aa13.73□□□□□ -0.21
R3HDM2-203ENST00000393811 TAF5LO75529 589 aa13.73□□□□□ -0.21
R3HDM2-203ENST00000393811 TFCP2Q12800 502 aa13.73□□□□□ -0.21
R3HDM2-203ENST00000393811 CREBRFQ8IUR6 639 aa13.73□□□□□ -0.21
R3HDM2-203ENST00000393811 SIRT1Q96EB6 747 aa13.73□□□□□ -0.21
R3HDM2-203ENST00000393811 FBXO38Q6PIJ6 1188 aa13.73□□□□□ -0.21
R3HDM2-203ENST00000393811 OLFM4Q6UX06 510 aa13.73□□□□□ -0.21
R3HDM2-203ENST00000393811 TIGD1Q96MW7 591 aa13.73□□□□□ -0.21
R3HDM2-203ENST00000393811 TSPOAP1O95153 1857 aa13.73□□□□□ -0.21
R3HDM2-203ENST00000393811 APPP05067 770 aa13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 HMGB1P09429 215 aaKnown RBP13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 RESTQ13127 1097 aa13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 KMT5BQ4FZB7 885 aa13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 TMEM131LA2VDJ0 1609 aa13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 SCRN1Q12765 414 aa13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 TAF7LQ5H9L4 462 aa13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 DHX32Q7L7V1 743 aaKnown RBP13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 XAGE3Q8WTP9 111 aa13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 DBNDD2Q9BQY9 259 aa13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 DLC1Q96QB1 1528 aa13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 DIP2CQ9Y2E4 1556 aa13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 GPS2Q13227 327 aa13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 COPS6Q7L5N1 327 aa13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 CCDC150Q8NCX0 1101 aa13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 XPO4Q9C0E2 1151 aaKnown RBP13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 CALCOCO1Q9P1Z2 691 aa13.72□□□□□ -0.21
R3HDM2-203ENST00000393811 NLRP2Q9NX02 1062 aa13.71□□□□□ -0.21
R3HDM2-203ENST00000393811 TNRQ92752 1358 aa13.71□□□□□ -0.21
R3HDM2-203ENST00000393811 CCP110O43303 1012 aa13.71□□□□□ -0.21
R3HDM2-203ENST00000393811 LTKP29376 864 aa13.71□□□□□ -0.21
R3HDM2-203ENST00000393811 MARCKSP29966 332 aaPredicted RBP13.71□□□□□ -0.21
R3HDM2-203ENST00000393811 SYCP1Q15431 976 aa13.71□□□□□ -0.21
R3HDM2-203ENST00000393811 AKAP4Q5JQC9 854 aa13.71□□□□□ -0.21
R3HDM2-203ENST00000393811 A0A087WZG4 1122 aa13.71□□□□□ -0.22
R3HDM2-203ENST00000393811 HOXB7P09629 217 aa13.71□□□□□ -0.22
R3HDM2-203ENST00000393811 ATP2B1P20020 1258 aa13.71□□□□□ -0.22
R3HDM2-203ENST00000393811 RAPGEF4Q8WZA2 1011 aa13.71□□□□□ -0.22
R3HDM2-203ENST00000393811 ORC3Q9UBD5 711 aaPredicted RBP13.71□□□□□ -0.22
R3HDM2-203ENST00000393811 DHX16O60231 1041 aaKnown RBP13.7□□□□□ -0.22
R3HDM2-203ENST00000393811 CHGBP05060 677 aa13.7□□□□□ -0.22
R3HDM2-203ENST00000393811 CYP21A2P08686 494 aa13.7□□□□□ -0.22
R3HDM2-203ENST00000393811 TRDNQ13061 729 aa13.7□□□□□ -0.22
R3HDM2-203ENST00000393811 TOMM22Q9NS69 142 aa13.7□□□□□ -0.22
R3HDM2-203ENST00000393811 SNRKQ9NRH2 765 aa13.7□□□□□ -0.22
R3HDM2-203ENST00000393811 TOP1P11387 765 aaKnown RBP13.7□□□□□ -0.22
R3HDM2-203ENST00000393811 TRIM29Q14134 588 aa13.7□□□□□ -0.22
R3HDM2-203ENST00000393811 CPLX2Q6PUV4 134 aaKnown RBP13.7□□□□□ -0.22
R3HDM2-203ENST00000393811 GOLGA8BA8MQT2 603 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 CDC25BP30305 580 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 UBASH3AP57075 661 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 IL17RAQ96F46 866 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 ZSWIM4Q9H7M6 989 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 ST7Q9NRC1 585 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 OVOS2A0A0J9YW53 1432 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 OVOS2Q6IE36 1432 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 TERF2Q15554 542 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 TTLL5Q6EMB2 1281 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 NFXL1Q6ZNB6 911 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 GOLPH3LQ9H4A5 285 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 PHF8Q9UPP1 1060 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 SPTLC2O15270 562 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 RNMTO43148 476 aaKnown RBP13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 GIGYF1O75420 1035 aaPredicted RBP13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 IQCB1Q15051 598 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 AMOTQ4VCS5 1084 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 TNNI3KQ59H18 835 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 UTP14AQ9BVJ6 771 aaKnown RBP13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 FPGT-TNNI3KV9GXZ4 949 aa13.69□□□□□ -0.22
R3HDM2-203ENST00000393811 VGLL3A8MV65 326 aa13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 IFIT1P09914 478 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms