RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 IQCA1Q86XH1 822 aa13.21□□□□□ -0.3
LAMB1-203ENST00000393560 ZKSCAN4Q969J2 545 aaPredicted RBP13.21□□□□□ -0.3
LAMB1-203ENST00000393560 MTA3Q9BTC8 594 aa13.21□□□□□ -0.3
LAMB1-203ENST00000393560 NUTM1Q86Y26 1132 aa13.2□□□□□ -0.3
LAMB1-203ENST00000393560 KCTD17Q8N5Z5 321 aa13.2□□□□□ -0.3
LAMB1-203ENST00000393560 LRRN4CLQ8ND94 238 aa13.2□□□□□ -0.3
LAMB1-203ENST00000393560 TSGA10Q9BZW7 698 aa13.2□□□□□ -0.3
LAMB1-203ENST00000393560 CGNL1Q0VF96 1302 aa13.2□□□□□ -0.3
LAMB1-203ENST00000393560 PDIA5Q14554 519 aa13.2□□□□□ -0.3
LAMB1-203ENST00000393560 NAA25Q14CX7 972 aa13.2□□□□□ -0.3
LAMB1-203ENST00000393560 DBN1Q16643 649 aa13.2□□□□□ -0.3
LAMB1-203ENST00000393560 APBB1IPQ7Z5R6 666 aaPredicted RBP13.2□□□□□ -0.3
LAMB1-203ENST00000393560 RPS6KA5O75582 802 aa13.19□□□□□ -0.3
LAMB1-203ENST00000393560 MRPL12P52815 198 aaKnown RBP13.19□□□□□ -0.3
LAMB1-203ENST00000393560 LAMB3Q13751 1172 aa13.19□□□□□ -0.3
LAMB1-203ENST00000393560 RBM26Q5T8P6 1007 aaKnown RBP13.19□□□□□ -0.3
LAMB1-203ENST00000393560 ZKSCAN2Q63HK3 967 aa13.19□□□□□ -0.3
LAMB1-203ENST00000393560 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.19□□□□□ -0.3
LAMB1-203ENST00000393560 RPGRIP1LQ68CZ1 1315 aa13.19□□□□□ -0.3
LAMB1-203ENST00000393560 ZNF521Q96K83 1311 aa13.19□□□□□ -0.3
LAMB1-203ENST00000393560 PIK3C2GO75747 1445 aa13.19□□□□□ -0.3
LAMB1-203ENST00000393560 PTPN14Q15678 1187 aa13.19□□□□□ -0.3
LAMB1-203ENST00000393560 B4GALNT2Q8NHY0 566 aa13.19□□□□□ -0.3
LAMB1-203ENST00000393560 C17orf50Q8WW18 174 aa13.19□□□□□ -0.3
LAMB1-203ENST00000393560 IFT172Q9UG01 1749 aa13.18□□□□□ -0.3
LAMB1-203ENST00000393560 EVI5LQ96CN4 794 aa13.18□□□□□ -0.3
LAMB1-203ENST00000393560 SPDL1Q96EA4 605 aa13.18□□□□□ -0.3
LAMB1-203ENST00000393560 PHACTR1Q9C0D0 580 aa13.18□□□□□ -0.3
LAMB1-203ENST00000393560 ESF1Q9H501 851 aaKnown RBP13.18□□□□□ -0.3
LAMB1-203ENST00000393560 VPS18Q9P253 973 aa13.18□□□□□ -0.3
LAMB1-203ENST00000393560 ZMYM4Q5VZL5 1548 aa13.18□□□□□ -0.3
LAMB1-203ENST00000393560 TBC1D8O95759 1140 aa13.18□□□□□ -0.3
LAMB1-203ENST00000393560 U2AF1L5P0DN76 240 aaPredicted RBP13.18□□□□□ -0.3
LAMB1-203ENST00000393560 U2AF1Q01081 240 aaKnown RBP eCLIP13.18□□□□□ -0.38e-7■□□□□ 9.4
LAMB1-203ENST00000393560 PREPLQ4J6C6 727 aaPredicted RBP13.18□□□□□ -0.3
LAMB1-203ENST00000393560 ARMC9Q7Z3E5 817 aa13.18□□□□□ -0.3
LAMB1-203ENST00000393560 SAAL1Q96ER3 474 aa13.18□□□□□ -0.3
LAMB1-203ENST00000393560 MTRQ99707 1265 aa13.18□□□□□ -0.3
LAMB1-203ENST00000393560 TMOD4Q9NZQ9 345 aa13.18□□□□□ -0.3
LAMB1-203ENST00000393560 NRXN1Q9ULB1 1477 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 THEMIS2Q5TEJ8 643 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 TAX1BP1Q86VP1 789 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 DDX11Q96FC9 970 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 FRMD4BQ9Y2L6 1034 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 PCDHB15Q9Y5E8 787 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 NEURL4Q96JN8 1562 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 KIF13AQ9H1H9 1805 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 EPB41L2O43491 1005 aaKnown RBP13.17□□□□□ -0.3
LAMB1-203ENST00000393560 MECOMQ03112 1051 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 FILIP1Q7Z7B0 1213 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 DRC7Q8IY82 874 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 STK24Q9Y6E0 443 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 PPLO60437 1756 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 H3BQF6 201 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 MCM2P49736 904 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 CARD14Q9BXL6 1004 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 RWDD1Q9H446 243 aaPredicted RBP13.17□□□□□ -0.3
LAMB1-203ENST00000393560 C1orf115Q9H7X2 142 aa13.17□□□□□ -0.3
LAMB1-203ENST00000393560 USP27XA6NNY8 438 aa13.16□□□□□ -0.3
LAMB1-203ENST00000393560 RTN3O95197 1032 aaPredicted RBP13.16□□□□□ -0.3
LAMB1-203ENST00000393560 SLC7A5Q01650 507 aa13.16□□□□□ -0.3
LAMB1-203ENST00000393560 KCNB1Q14721 858 aa13.16□□□□□ -0.3
LAMB1-203ENST00000393560 CABS1Q96KC9 395 aa13.16□□□□□ -0.3
LAMB1-203ENST00000393560 SLC12A5Q9H2X9 1139 aa13.16□□□□□ -0.3
LAMB1-203ENST00000393560 ERVK-7P63135 1459 aa13.16□□□□□ -0.3
LAMB1-203ENST00000393560 IPO5O00410 1097 aaKnown RBP13.16□□□□□ -0.3
LAMB1-203ENST00000393560 CHUKO15111 745 aa13.16□□□□□ -0.3
LAMB1-203ENST00000393560 ZNF24P17028 368 aa13.16□□□□□ -0.3
LAMB1-203ENST00000393560 CA8P35219 290 aa13.16□□□□□ -0.3
LAMB1-203ENST00000393560 SAPCD2Q86UD0 394 aa13.16□□□□□ -0.3
LAMB1-203ENST00000393560 LARP6Q9BRS8 491 aaKnown RBP13.16□□□□□ -0.3
LAMB1-203ENST00000393560 MMADHCQ9H3L0 296 aaPredicted RBP13.16□□□□□ -0.3
LAMB1-203ENST00000393560 NRBP1Q9UHY1 535 aa13.16□□□□□ -0.3
LAMB1-203ENST00000393560 IQSEC3Q9UPP2 1182 aaPredicted RBP13.16□□□□□ -0.3
LAMB1-203ENST00000393560 SCNN1BP51168 640 aa13.15□□□□□ -0.3
LAMB1-203ENST00000393560 ELOA2Q8IYF1 753 aaPredicted RBP13.15□□□□□ -0.3
LAMB1-203ENST00000393560 TMX3Q96JJ7 454 aa13.15□□□□□ -0.3
LAMB1-203ENST00000393560 MIS18AQ9NYP9 233 aa13.15□□□□□ -0.3
LAMB1-203ENST00000393560 ZDHHC9Q9Y397 364 aa13.15□□□□□ -0.3
LAMB1-203ENST00000393560 KIAA1210Q9ULL0 1709 aa13.15□□□□□ -0.3
LAMB1-203ENST00000393560 ATP8B1O43520 1251 aa13.15□□□□□ -0.3
LAMB1-203ENST00000393560 RRP12Q5JTH9 1297 aaKnown RBP13.15□□□□□ -0.3
LAMB1-203ENST00000393560 SFMBT2Q5VUG0 894 aa13.15□□□□□ -0.3
LAMB1-203ENST00000393560 TMEM110Q86TL2 294 aa13.15□□□□□ -0.3
LAMB1-203ENST00000393560 FAM107BQ9H098 131 aa13.15□□□□□ -0.3
LAMB1-203ENST00000393560 RTEL1Q9NZ71 1219 aa13.15□□□□□ -0.3
LAMB1-203ENST00000393560 CSB-PGBD3P0DP91 1061 aa13.14□□□□□ -0.31
LAMB1-203ENST00000393560 DDR1Q08345 913 aa13.14□□□□□ -0.31
LAMB1-203ENST00000393560 TMEM62Q0P6H9 643 aa13.14□□□□□ -0.31
LAMB1-203ENST00000393560 TSR2Q969E8 191 aaKnown RBP13.14□□□□□ -0.31
LAMB1-203ENST00000393560 RBM17Q96I25 401 aaKnown RBP13.14□□□□□ -0.31
LAMB1-203ENST00000393560 SHTN1A0MZ66 631 aa13.14□□□□□ -0.31
LAMB1-203ENST00000393560 EXOC5O00471 708 aa13.14□□□□□ -0.31
LAMB1-203ENST00000393560 ERC2O15083 957 aa13.14□□□□□ -0.31
LAMB1-203ENST00000393560 ZSCAN25Q6NSZ9 544 aa13.14□□□□□ -0.31
LAMB1-203ENST00000393560 MYO5BQ9ULV0 1848 aa13.14□□□□□ -0.31
LAMB1-203ENST00000393560 NEXMIFQ5QGS0 1516 aa13.14□□□□□ -0.31
LAMB1-203ENST00000393560 PIK3C2BO00750 1634 aa13.13□□□□□ -0.31
LAMB1-203ENST00000393560 SASH1O94885 1247 aa13.13□□□□□ -0.31
LAMB1-203ENST00000393560 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 295.7 ms