RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 XPO4Q9C0E2 1151 aaKnown RBP17.02■□□□□ 0.32
SFXN3-202ENST00000393459 GPHNQ9NQX3 736 aaPredicted RBP17.02■□□□□ 0.32
SFXN3-202ENST00000393459 ZNF142P52746 1687 aaPredicted RBP17.02■□□□□ 0.31
SFXN3-202ENST00000393459 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.31
SFXN3-202ENST00000393459 TTC21AQ8NDW8 1320 aa17.02■□□□□ 0.31
SFXN3-202ENST00000393459 GABPB1Q06547 395 aaPredicted RBP17.02■□□□□ 0.31
SFXN3-202ENST00000393459 DPCR1Q3MIW9 517 aa17.02■□□□□ 0.31
SFXN3-202ENST00000393459 TEX35Q5T0J7 233 aa17.02■□□□□ 0.31
SFXN3-202ENST00000393459 PDILTQ8N807 584 aa17.02■□□□□ 0.31
SFXN3-202ENST00000393459 MNS1Q8NEH6 495 aa17.02■□□□□ 0.31
SFXN3-202ENST00000393459 DNAAF4Q8WXU2 420 aa17.02■□□□□ 0.31
SFXN3-202ENST00000393459 ZSCAN31Q96LW9 406 aaPredicted RBP17.02■□□□□ 0.31
SFXN3-202ENST00000393459 MAP3K2Q9Y2U5 619 aa17.02■□□□□ 0.31
SFXN3-202ENST00000393459 HSP90AB3PQ58FF7 597 aa17.01■□□□□ 0.31
SFXN3-202ENST00000393459 TDRD7Q8NHU6 1098 aaKnown RBP17.01■□□□□ 0.31
SFXN3-202ENST00000393459 CARD6Q9BX69 1037 aa17.01■□□□□ 0.31
SFXN3-202ENST00000393459 SETD1BQ9UPS6 1966 aaKnown RBP17.01■□□□□ 0.31
SFXN3-202ENST00000393459 TRIM66O15016 1216 aa17.01■□□□□ 0.31
SFXN3-202ENST00000393459 ATP1A3P13637 1013 aa17.01■□□□□ 0.31
SFXN3-202ENST00000393459 KCNA6P17658 529 aa17.01■□□□□ 0.31
SFXN3-202ENST00000393459 CCZ1BP86790 482 aa17.01■□□□□ 0.31
SFXN3-202ENST00000393459 CCZ1P86791 482 aaPredicted RBP17.01■□□□□ 0.31
SFXN3-202ENST00000393459 OVOS2A0A0J9YW53 1432 aa17.01■□□□□ 0.31
SFXN3-202ENST00000393459 OVOS2Q6IE36 1432 aa17.01■□□□□ 0.31
SFXN3-202ENST00000393459 ANKARQ7Z5J8 1434 aa17■□□□□ 0.31
SFXN3-202ENST00000393459 PDCP20941 246 aa17■□□□□ 0.31
SFXN3-202ENST00000393459 G3BP1Q13283 466 aaKnown RBP eCLIP17■□□□□ 0.31
SFXN3-202ENST00000393459 IQCB1Q15051 598 aa17■□□□□ 0.31
SFXN3-202ENST00000393459 UBXN4Q92575 508 aa17■□□□□ 0.31
SFXN3-202ENST00000393459 MARCKSP29966 332 aaPredicted RBP16.99■□□□□ 0.31
SFXN3-202ENST00000393459 HAND2P61296 217 aa16.99■□□□□ 0.31
SFXN3-202ENST00000393459 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
SFXN3-202ENST00000393459 CRB1P82279 1406 aa16.99■□□□□ 0.31
SFXN3-202ENST00000393459 SSH2Q76I76 1423 aa16.99■□□□□ 0.31
SFXN3-202ENST00000393459 PHACTR2O75167 634 aa16.99■□□□□ 0.31
SFXN3-202ENST00000393459 E4F1Q66K89 784 aaPredicted RBP16.99■□□□□ 0.31
SFXN3-202ENST00000393459 KRBA2Q6ZNG9 492 aa16.99■□□□□ 0.31
SFXN3-202ENST00000393459 PLEKHA4Q9H4M7 779 aa16.99■□□□□ 0.31
SFXN3-202ENST00000393459 SFPQP23246 707 aaKnown RBP eCLIP16.98■□□□□ 0.31
SFXN3-202ENST00000393459 RPS6KB1P23443 525 aa16.98■□□□□ 0.31
SFXN3-202ENST00000393459 GPATCH3Q96I76 525 aa16.98■□□□□ 0.31
SFXN3-202ENST00000393459 ERO1AQ96HE7 468 aa16.98■□□□□ 0.31
SFXN3-202ENST00000393459 CREBRFQ8IUR6 639 aa16.98■□□□□ 0.31
SFXN3-202ENST00000393459 PPP1R13BQ96KQ4 1090 aa16.98■□□□□ 0.31
SFXN3-202ENST00000393459 RNF216Q9NWF9 866 aaPredicted RBP16.98■□□□□ 0.31
SFXN3-202ENST00000393459 USP31Q70CQ4 1352 aa16.97■□□□□ 0.31
SFXN3-202ENST00000393459 PSMA5P28066 241 aa16.97■□□□□ 0.31
SFXN3-202ENST00000393459 SCRN1Q12765 414 aa16.97■□□□□ 0.31
SFXN3-202ENST00000393459 STX1AQ16623 288 aa16.97■□□□□ 0.31
SFXN3-202ENST00000393459 DHX40Q8IX18 779 aaKnown RBP16.97■□□□□ 0.31
SFXN3-202ENST00000393459 DNAJC5Q9H3Z4 198 aa16.97■□□□□ 0.31
SFXN3-202ENST00000393459 ERBB3P21860 1342 aa16.97■□□□□ 0.31
SFXN3-202ENST00000393459 TFRCP02786 760 aaKnown RBP16.97■□□□□ 0.31
SFXN3-202ENST00000393459 PNMA6AP0CW24 399 aaPredicted RBP16.97■□□□□ 0.31
SFXN3-202ENST00000393459 NEUROD6Q96NK8 337 aa16.97■□□□□ 0.31
SFXN3-202ENST00000393459 BICC1Q9H694 974 aaKnown RBP16.97■□□□□ 0.31
SFXN3-202ENST00000393459 LMAN1P49257 510 aa16.96■□□□□ 0.31
SFXN3-202ENST00000393459 TMCO3Q6UWJ1 677 aa16.96■□□□□ 0.31
SFXN3-202ENST00000393459 CEP57L1Q8IYX8 460 aa16.96■□□□□ 0.31
SFXN3-202ENST00000393459 RXRAP19793 462 aa16.96■□□□□ 0.31
SFXN3-202ENST00000393459 SPECC1Q5M775 1068 aa16.96■□□□□ 0.31
SFXN3-202ENST00000393459 RNF20Q5VTR2 975 aa16.96■□□□□ 0.31
SFXN3-202ENST00000393459 WWC2Q6AWC2 1192 aa16.96■□□□□ 0.31
SFXN3-202ENST00000393459 ARMCX5Q6P1M9 558 aa16.96■□□□□ 0.31
SFXN3-202ENST00000393459 SMARCE1Q969G3 411 aa16.96■□□□□ 0.31
SFXN3-202ENST00000393459 LRRC59Q96AG4 307 aaKnown RBP16.96■□□□□ 0.31
SFXN3-202ENST00000393459 LCMT1Q9UIC8 334 aa16.96■□□□□ 0.31
SFXN3-202ENST00000393459 SASH1O94885 1247 aa16.95■□□□□ 0.3
SFXN3-202ENST00000393459 KARSQ15046 597 aaKnown RBP16.95■□□□□ 0.3
SFXN3-202ENST00000393459 NEK1Q96PY6 1258 aa16.95■□□□□ 0.3
SFXN3-202ENST00000393459 HINFPQ9BQA5 517 aa16.95■□□□□ 0.3
SFXN3-202ENST00000393459 CFAP100Q494V2 611 aa16.95■□□□□ 0.3
SFXN3-202ENST00000393459 EVI5LQ96CN4 794 aa16.95■□□□□ 0.3
SFXN3-202ENST00000393459 TOMM22Q9NS69 142 aa16.95■□□□□ 0.3
SFXN3-202ENST00000393459 SERPINC1P01008 464 aa16.95■□□□□ 0.3
SFXN3-202ENST00000393459 PLA2G4AP47712 749 aa16.95■□□□□ 0.3
SFXN3-202ENST00000393459 NDUFA8P51970 172 aa16.95■□□□□ 0.3
SFXN3-202ENST00000393459 RAD51AP2Q09MP3 1159 aa16.95■□□□□ 0.3
SFXN3-202ENST00000393459 NYAP1Q6ZVC0 841 aa16.95■□□□□ 0.3
SFXN3-202ENST00000393459 MAP4K1Q92918 833 aa16.95■□□□□ 0.3
SFXN3-202ENST00000393459 DESI2Q9BSY9 194 aa16.95■□□□□ 0.3
SFXN3-202ENST00000393459 IRX2Q9BZI1 471 aaPredicted RBP16.95■□□□□ 0.3
SFXN3-202ENST00000393459 PTPDC1A2A3K4 754 aa16.94■□□□□ 0.3
SFXN3-202ENST00000393459 MCM6Q14566 821 aa16.94■□□□□ 0.3
SFXN3-202ENST00000393459 BMS1Q14692 1282 aaKnown RBP16.94■□□□□ 0.3
SFXN3-202ENST00000393459 BEND3Q5T5X7 828 aa16.94■□□□□ 0.3
SFXN3-202ENST00000393459 SUCLG2Q96I99 432 aa16.94■□□□□ 0.3
SFXN3-202ENST00000393459 CCDC85AQ96PX6 553 aaPredicted RBP16.94■□□□□ 0.3
SFXN3-202ENST00000393459 FHOD1Q9Y613 1164 aa16.94■□□□□ 0.3
SFXN3-202ENST00000393459 NALCNQ8IZF0 1738 aa16.94■□□□□ 0.3
SFXN3-202ENST00000393459 ATP2B1P20020 1258 aa16.94■□□□□ 0.3
SFXN3-202ENST00000393459 RESTQ13127 1097 aa16.94■□□□□ 0.3
SFXN3-202ENST00000393459 RABEP2Q9H5N1 569 aa16.94■□□□□ 0.3
SFXN3-202ENST00000393459 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
SFXN3-202ENST00000393459 STK38Q15208 465 aa16.93■□□□□ 0.3
SFXN3-202ENST00000393459 NBPF11Q86T75 865 aa16.93■□□□□ 0.3
SFXN3-202ENST00000393459 DPF2Q92785 391 aa16.93■□□□□ 0.3
SFXN3-202ENST00000393459 CPLX3Q8WVH0 158 aa16.93■□□□□ 0.3
SFXN3-202ENST00000393459 CALCOCO1Q9P1Z2 691 aa16.93■□□□□ 0.3
SFXN3-202ENST00000393459 CHD2O14647 1828 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms