RNA–Protein interactions for RNA: ENST00000393240.7

SYT1-202, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-202ENST00000393240 ANTXR1Q9H6X2 564 aa11.71□□□□□ -0.53
SYT1-202ENST00000393240 C4BP0C0L5 1744 aa11.71□□□□□ -0.53
SYT1-202ENST00000393240 RFC4P35249 363 aa11.71□□□□□ -0.53
SYT1-202ENST00000393240 GORABQ5T7V8 394 aa11.71□□□□□ -0.53
SYT1-202ENST00000393240 DNAJC2Q99543 621 aaKnown RBP11.71□□□□□ -0.53
SYT1-202ENST00000393240 PAG1Q9NWQ8 432 aa11.71□□□□□ -0.53
SYT1-202ENST00000393240 SRP68Q9UHB9 627 aaKnown RBP11.71□□□□□ -0.53
SYT1-202ENST00000393240 FAM227BQ96M60 508 aa11.71□□□□□ -0.54
SYT1-202ENST00000393240 MPHOSPH8Q99549 860 aa11.71□□□□□ -0.54
SYT1-202ENST00000393240 TAF1LQ8IZX4 1826 aa11.7□□□□□ -0.54
SYT1-202ENST00000393240 TRIM37O94972 964 aa11.7□□□□□ -0.54
SYT1-202ENST00000393240 CD2BP2O95400 341 aaKnown RBP11.7□□□□□ -0.54
SYT1-202ENST00000393240 IGHMBP2P38935 993 aaKnown RBP11.7□□□□□ -0.54
SYT1-202ENST00000393240 TTC39AQ5SRH9 613 aa11.7□□□□□ -0.54
SYT1-202ENST00000393240 TPTE2Q6XPS3 522 aa11.7□□□□□ -0.54
SYT1-202ENST00000393240 SMIM5Q71RC9 77 aa11.7□□□□□ -0.54
SYT1-202ENST00000393240 EDC3Q96F86 508 aaKnown RBP11.7□□□□□ -0.54
SYT1-202ENST00000393240 LAMB2P55268 1798 aa11.7□□□□□ -0.54
SYT1-202ENST00000393240 DDX60Q8IY21 1712 aaKnown RBP11.7□□□□□ -0.54
SYT1-202ENST00000393240 AMIGO3Q86WK7 504 aa11.7□□□□□ -0.54
SYT1-202ENST00000393240 LPIN2Q92539 896 aa11.7□□□□□ -0.54
SYT1-202ENST00000393240 CDC5LQ99459 802 aaKnown RBP11.7□□□□□ -0.54
SYT1-202ENST00000393240 SEC31BQ9NQW1 1179 aa11.7□□□□□ -0.54
SYT1-202ENST00000393240 PALD1Q9ULE6 856 aa11.7□□□□□ -0.54
SYT1-202ENST00000393240 FGFR2P21802 821 aa11.69□□□□□ -0.54
SYT1-202ENST00000393240 GTF2E1P29083 439 aaPredicted RBP11.69□□□□□ -0.54
SYT1-202ENST00000393240 ADORA1P30542 326 aa11.69□□□□□ -0.54
SYT1-202ENST00000393240 PUM3Q15397 648 aaKnown RBP11.69□□□□□ -0.54
SYT1-202ENST00000393240 BICDL1Q6ZP65 573 aa11.69□□□□□ -0.54
SYT1-202ENST00000393240 MAP4K1Q92918 833 aa11.69□□□□□ -0.54
SYT1-202ENST00000393240 KCNB2Q92953 911 aa11.69□□□□□ -0.54
SYT1-202ENST00000393240 MED23Q9ULK4 1368 aa11.69□□□□□ -0.54
SYT1-202ENST00000393240 CCDC171Q6TFL3 1326 aa11.69□□□□□ -0.54
SYT1-202ENST00000393240 A0A0D9SFI3 127 aa11.69□□□□□ -0.54
SYT1-202ENST00000393240 MCM2P49736 904 aa11.69□□□□□ -0.54
SYT1-202ENST00000393240 LRRFIP1Q32MZ4 808 aaKnown RBP11.69□□□□□ -0.54
SYT1-202ENST00000393240 NBPF5PQ86XG9 351 aaPredicted RBP11.69□□□□□ -0.54
SYT1-202ENST00000393240 GOLIM4O00461 696 aa11.68□□□□□ -0.54
SYT1-202ENST00000393240 SSFA2P28290 1259 aa11.68□□□□□ -0.54
SYT1-202ENST00000393240 DDX46Q7L014 1031 aaKnown RBP11.68□□□□□ -0.54
SYT1-202ENST00000393240 BRWD3Q6RI45 1802 aa11.68□□□□□ -0.54
SYT1-202ENST00000393240 PLSCR1O15162 318 aa11.68□□□□□ -0.54
SYT1-202ENST00000393240 RXRBP28702 533 aa11.68□□□□□ -0.54
SYT1-202ENST00000393240 PTH1RQ03431 593 aa11.68□□□□□ -0.54
SYT1-202ENST00000393240 NECTIN1Q15223 517 aa11.68□□□□□ -0.54
SYT1-202ENST00000393240 NDUFB9Q9Y6M9 179 aa11.68□□□□□ -0.54
SYT1-202ENST00000393240 SPEF2Q9C093 1822 aa11.68□□□□□ -0.54
SYT1-202ENST00000393240 MCMDC2Q4G0Z9 681 aa11.68□□□□□ -0.54
SYT1-202ENST00000393240 NLRP3Q96P20 1036 aa11.68□□□□□ -0.54
SYT1-202ENST00000393240 SLKQ9H2G2 1235 aaPredicted RBP11.68□□□□□ -0.54
SYT1-202ENST00000393240 HELLSQ9NRZ9 838 aa11.68□□□□□ -0.54
SYT1-202ENST00000393240 SNX14Q9Y5W7 946 aa11.68□□□□□ -0.54
SYT1-202ENST00000393240 NEK4P51957 841 aa11.67□□□□□ -0.54
SYT1-202ENST00000393240 BSDC1Q9NW68 430 aaPredicted RBP11.67□□□□□ -0.54
SYT1-202ENST00000393240 COL24A1Q17RW2 1714 aa11.67□□□□□ -0.54
SYT1-202ENST00000393240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.67□□□□□ -0.54
SYT1-202ENST00000393240 PHF14O94880 888 aa11.67□□□□□ -0.54
SYT1-202ENST00000393240 UQCRFS1P1P0C7P4 283 aa11.67□□□□□ -0.54
SYT1-202ENST00000393240 SLC5A1P13866 664 aa11.67□□□□□ -0.54
SYT1-202ENST00000393240 DDIT3P35638 169 aa11.67□□□□□ -0.54
SYT1-202ENST00000393240 ANKRD18AQ8IVF6 992 aa11.67□□□□□ -0.54
SYT1-202ENST00000393240 TAF5LO75529 589 aa11.66□□□□□ -0.54
SYT1-202ENST00000393240 PRKCSHP14314 528 aaPredicted RBP11.66□□□□□ -0.54
SYT1-202ENST00000393240 ARID4AP29374 1257 aaPredicted RBP11.66□□□□□ -0.54
SYT1-202ENST00000393240 TXNRD1Q16881 649 aa11.66□□□□□ -0.54
SYT1-202ENST00000393240 PROM2Q8N271 834 aa11.66□□□□□ -0.54
SYT1-202ENST00000393240 CHMP5Q9NZZ3 219 aa11.66□□□□□ -0.54
SYT1-202ENST00000393240 CARMIL3Q8ND23 1372 aa11.66□□□□□ -0.54
SYT1-202ENST00000393240 RNF113AO15541 343 aaKnown RBP11.66□□□□□ -0.54
SYT1-202ENST00000393240 ZFYP08048 801 aaPredicted RBP11.66□□□□□ -0.54
SYT1-202ENST00000393240 FKBP4Q02790 459 aaKnown RBP eCLIP11.66□□□□□ -0.54
SYT1-202ENST00000393240 ZMYM1Q5SVZ6 1142 aa11.66□□□□□ -0.54
SYT1-202ENST00000393240 C3orf67Q6ZVT6 689 aa11.66□□□□□ -0.54
SYT1-202ENST00000393240 TM6SF1Q9BZW5 370 aa11.66□□□□□ -0.54
SYT1-202ENST00000393240 CCDC102BQ68D86 513 aa11.66□□□□□ -0.54
SYT1-202ENST00000393240 ZNF589Q86UQ0 364 aaPredicted RBP11.66□□□□□ -0.54
SYT1-202ENST00000393240 RASEFQ8IZ41 740 aa11.66□□□□□ -0.54
SYT1-202ENST00000393240 SPRYD3Q8NCJ5 442 aa11.66□□□□□ -0.54
SYT1-202ENST00000393240 CIZ1Q9ULV3 898 aaPredicted RBP11.66□□□□□ -0.54
SYT1-202ENST00000393240 RBM8AQ9Y5S9 174 aaKnown RBP11.66□□□□□ -0.54
SYT1-202ENST00000393240 ZKSCAN1P17029 563 aaPredicted RBP11.65□□□□□ -0.54
SYT1-202ENST00000393240 CHRNDQ07001 517 aa11.65□□□□□ -0.54
SYT1-202ENST00000393240 SCARF1Q14162 830 aa11.65□□□□□ -0.54
SYT1-202ENST00000393240 NFIXQ14938 502 aa11.65□□□□□ -0.54
SYT1-202ENST00000393240 TTF1Q15361 905 aaPredicted RBP11.65□□□□□ -0.54
SYT1-202ENST00000393240 HELBQ8NG08 1087 aaPredicted RBP11.65□□□□□ -0.54
SYT1-202ENST00000393240 HSP90AA1P07900 732 aaKnown RBP11.65□□□□□ -0.54
SYT1-202ENST00000393240 MCAMP43121 646 aa11.65□□□□□ -0.54
SYT1-202ENST00000393240 ZAP70P43403 619 aa11.65□□□□□ -0.54
SYT1-202ENST00000393240 RNF20Q5VTR2 975 aa11.65□□□□□ -0.54
SYT1-202ENST00000393240 GYS1P13807 737 aa11.64□□□□□ -0.55
SYT1-202ENST00000393240 TSGA10IPQ3SY00 556 aa11.64□□□□□ -0.55
SYT1-202ENST00000393240 CREB3L3Q68CJ9 461 aa11.64□□□□□ -0.55
SYT1-202ENST00000393240 PRPF40BQ6NWY9 871 aaKnown RBP11.64□□□□□ -0.55
SYT1-202ENST00000393240 HMG20BQ9P0W2 317 aa11.64□□□□□ -0.55
SYT1-202ENST00000393240 C4AP0C0L4 1744 aa11.64□□□□□ -0.55
SYT1-202ENST00000393240 KCNJ4P48050 445 aa11.64□□□□□ -0.55
SYT1-202ENST00000393240 RPS8P62241 208 aaKnown RBP11.63□□□□□ -0.55
SYT1-202ENST00000393240 ZSCAN25Q6NSZ9 544 aa11.63□□□□□ -0.55
SYT1-202ENST00000393240 U3KPZ7 1027 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms