RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TTC12Q9H892 705 aaPredicted RBP12.35□□□□□ -0.43
CALD1-203ENST00000393118 JAK2O60674 1132 aa12.35□□□□□ -0.43
CALD1-203ENST00000393118 POLR3DP05423 398 aaPredicted RBP12.35□□□□□ -0.43
CALD1-203ENST00000393118 BICDL1Q6ZP65 573 aa12.35□□□□□ -0.43
CALD1-203ENST00000393118 CCDC144CPQ8IYA2 1237 aa12.35□□□□□ -0.43
CALD1-203ENST00000393118 ERICH2A1L162 156 aa12.34□□□□□ -0.43
CALD1-203ENST00000393118 GOLGA8BA8MQT2 603 aa12.34□□□□□ -0.43
CALD1-203ENST00000393118 CYP27B1O15528 508 aa12.34□□□□□ -0.43
CALD1-203ENST00000393118 HMGB1P09429 215 aaKnown RBP12.34□□□□□ -0.43
CALD1-203ENST00000393118 TAF3Q5VWG9 929 aa12.34□□□□□ -0.43
CALD1-203ENST00000393118 AIDAQ96BJ3 306 aa12.34□□□□□ -0.43
CALD1-203ENST00000393118 ABCF2Q9UG63 623 aa12.34□□□□□ -0.43
CALD1-203ENST00000393118 ZNF213O14771 459 aa12.34□□□□□ -0.43
CALD1-203ENST00000393118 DDIT3P35638 169 aa12.34□□□□□ -0.43
CALD1-203ENST00000393118 NCOA5Q9HCD5 579 aaKnown RBP12.34□□□□□ -0.43
CALD1-203ENST00000393118 ANKRD18BA2A2Z9 1011 aa12.34□□□□□ -0.43
CALD1-203ENST00000393118 FILIP1Q7Z7B0 1213 aa12.34□□□□□ -0.43
CALD1-203ENST00000393118 PCDH11XQ9BZA7 1347 aa12.33□□□□□ -0.43
CALD1-203ENST00000393118 PCDH11YQ9BZA8 1340 aa12.33□□□□□ -0.43
CALD1-203ENST00000393118 EYA2O00167 538 aa12.33□□□□□ -0.44
CALD1-203ENST00000393118 AEBP2Q6ZN18 517 aaPredicted RBP12.33□□□□□ -0.44
CALD1-203ENST00000393118 ZSWIM6Q9HCJ5 1215 aa12.33□□□□□ -0.44
CALD1-203ENST00000393118 MTMR7Q9Y216 660 aa12.33□□□□□ -0.44
CALD1-203ENST00000393118 EXOC5O00471 708 aa12.33□□□□□ -0.44
CALD1-203ENST00000393118 ATP2B3Q16720 1220 aa12.33□□□□□ -0.44
CALD1-203ENST00000393118 LRRC24Q50LG9 513 aa12.33□□□□□ -0.44
CALD1-203ENST00000393118 DNAJC10Q8IXB1 793 aa12.33□□□□□ -0.44
CALD1-203ENST00000393118 NUP133Q8WUM0 1156 aa12.33□□□□□ -0.44
CALD1-203ENST00000393118 C8orf76Q96K31 380 aa12.33□□□□□ -0.44
CALD1-203ENST00000393118 ATP5JP18859 108 aa12.32□□□□□ -0.44
CALD1-203ENST00000393118 TDO2P48775 406 aa12.32□□□□□ -0.44
CALD1-203ENST00000393118 ADGRL3Q9HAR2 1447 aa12.32□□□□□ -0.44
CALD1-203ENST00000393118 SAFBQ15424 915 aaKnown RBP eCLIP12.32□□□□□ -0.44
CALD1-203ENST00000393118 SLFNL1Q499Z3 407 aa12.32□□□□□ -0.44
CALD1-203ENST00000393118 KBTBD3Q8NAB2 608 aa12.32□□□□□ -0.44
CALD1-203ENST00000393118 MAP4K1Q92918 833 aa12.32□□□□□ -0.44
CALD1-203ENST00000393118 LRP2BPQ9P2M1 347 aa12.32□□□□□ -0.44
CALD1-203ENST00000393118 IQSEC3Q9UPP2 1182 aaPredicted RBP12.32□□□□□ -0.44
CALD1-203ENST00000393118 MTMR6Q9Y217 621 aa12.32□□□□□ -0.44
CALD1-203ENST00000393118 ZKSCAN5Q9Y2L8 839 aa12.32□□□□□ -0.44
CALD1-203ENST00000393118 ZSCAN25Q6NSZ9 544 aa12.32□□□□□ -0.44
CALD1-203ENST00000393118 ACSBG1Q96GR2 724 aa12.32□□□□□ -0.44
CALD1-203ENST00000393118 GTPBP4Q9BZE4 634 aaKnown RBP12.32□□□□□ -0.44
CALD1-203ENST00000393118 KLF18A0A0U1RQI7 1052 aa12.31□□□□□ -0.44
CALD1-203ENST00000393118 SMC2O95347 1197 aa12.31□□□□□ -0.44
CALD1-203ENST00000393118 MICU3Q86XE3 530 aa12.31□□□□□ -0.44
CALD1-203ENST00000393118 RASSF8Q8NHQ8 419 aa12.31□□□□□ -0.44
CALD1-203ENST00000393118 TM6SF1Q9BZW5 370 aa12.31□□□□□ -0.44
CALD1-203ENST00000393118 BTG4Q9NY30 223 aa12.31□□□□□ -0.44
CALD1-203ENST00000393118 ORC3Q9UBD5 711 aaPredicted RBP12.31□□□□□ -0.44
CALD1-203ENST00000393118 ZNF165P49910 485 aa12.31□□□□□ -0.44
CALD1-203ENST00000393118 PTPN12Q05209 780 aaKnown RBP12.31□□□□□ -0.44
CALD1-203ENST00000393118 DHX32Q7L7V1 743 aaKnown RBP12.31□□□□□ -0.44
CALD1-203ENST00000393118 FSIP1Q8NA03 581 aa12.31□□□□□ -0.44
CALD1-203ENST00000393118 COPRSQ9NQ92 184 aa12.31□□□□□ -0.44
CALD1-203ENST00000393118 RNF113AO15541 343 aaKnown RBP12.31□□□□□ -0.44
CALD1-203ENST00000393118 EPB41L2O43491 1005 aaKnown RBP12.31□□□□□ -0.44
CALD1-203ENST00000393118 SLC9C2Q5TAH2 1124 aa12.31□□□□□ -0.44
CALD1-203ENST00000393118 PUS3Q9BZE2 481 aaKnown RBP12.31□□□□□ -0.44
CALD1-203ENST00000393118 PTPDC1A2A3K4 754 aa12.31□□□□□ -0.44
CALD1-203ENST00000393118 MTX1Q13505 466 aa12.31□□□□□ -0.44
CALD1-203ENST00000393118 CHGBP05060 677 aa12.3□□□□□ -0.44
CALD1-203ENST00000393118 ANO6Q4KMQ2 910 aa12.3□□□□□ -0.44
CALD1-203ENST00000393118 DDX19AQ9NUU7 478 aaKnown RBP12.3□□□□□ -0.44
CALD1-203ENST00000393118 TAF5LO75529 589 aa12.3□□□□□ -0.44
CALD1-203ENST00000393118 CYP2E1P05181 493 aaPredicted RBP12.3□□□□□ -0.44
CALD1-203ENST00000393118 RXRAP19793 462 aa12.3□□□□□ -0.44
CALD1-203ENST00000393118 SART3Q15020 963 aaKnown RBP12.3□□□□□ -0.44
CALD1-203ENST00000393118 CCAR1Q8IX12 1150 aaKnown RBP12.3□□□□□ -0.44
CALD1-203ENST00000393118 CCDC191Q8NCU4 936 aa12.3□□□□□ -0.44
CALD1-203ENST00000393118 NAT10Q9H0A0 1025 aaKnown RBP12.3□□□□□ -0.44
CALD1-203ENST00000393118 NAPBQ9H115 298 aa12.3□□□□□ -0.44
CALD1-203ENST00000393118 CEMIPQ8WUJ3 1361 aa12.3□□□□□ -0.44
CALD1-203ENST00000393118 CCDC69A6NI79 296 aa12.3□□□□□ -0.44
CALD1-203ENST00000393118 BIN1O00499 593 aa12.3□□□□□ -0.44
CALD1-203ENST00000393118 TTLL5Q6EMB2 1281 aa12.3□□□□□ -0.44
CALD1-203ENST00000393118 RAI14Q9P0K7 980 aa12.3□□□□□ -0.44
CALD1-203ENST00000393118 NCOA3Q9Y6Q9 1424 aa12.3□□□□□ -0.44
CALD1-203ENST00000393118 MINDY4BA8MYZ0 360 aa12.29□□□□□ -0.44
CALD1-203ENST00000393118 KIF20AO95235 890 aa12.29□□□□□ -0.44
CALD1-203ENST00000393118 TPD52L1Q16890 204 aaPredicted RBP12.29□□□□□ -0.44
CALD1-203ENST00000393118 LUZP1Q86V48 1076 aa12.29□□□□□ -0.44
CALD1-203ENST00000393118 TEX13AQ9BXU3 409 aaPredicted RBP12.29□□□□□ -0.44
CALD1-203ENST00000393118 DNAJC25Q9H1X3 360 aa12.29□□□□□ -0.44
CALD1-203ENST00000393118 SLAIN2Q9P270 581 aa12.29□□□□□ -0.44
CALD1-203ENST00000393118 ANKRD26Q9UPS8 1709 aa12.29□□□□□ -0.44
CALD1-203ENST00000393118 DMTNQ08495 405 aa12.29□□□□□ -0.44
CALD1-203ENST00000393118 NECTIN1Q15223 517 aa12.29□□□□□ -0.44
CALD1-203ENST00000393118 OTUD7BQ6GQQ9 843 aa12.29□□□□□ -0.44
CALD1-203ENST00000393118 ISM2Q6H9L7 571 aa12.29□□□□□ -0.44
CALD1-203ENST00000393118 XAGE2Q96GT9 111 aa12.29□□□□□ -0.44
CALD1-203ENST00000393118 PIP4K2BP78356 416 aa12.29□□□□□ -0.44
CALD1-203ENST00000393118 TYRO3Q06418 890 aa12.29□□□□□ -0.44
CALD1-203ENST00000393118 AK9Q5TCS8 1911 aa12.29□□□□□ -0.44
CALD1-203ENST00000393118 IRS4O14654 1257 aaPredicted RBP12.28□□□□□ -0.44
CALD1-203ENST00000393118 IGHMBP2P38935 993 aaKnown RBP12.28□□□□□ -0.44
CALD1-203ENST00000393118 IRX3P78415 501 aaPredicted RBP12.28□□□□□ -0.44
CALD1-203ENST00000393118 C17orf53Q8N3J3 647 aaPredicted RBP12.28□□□□□ -0.44
CALD1-203ENST00000393118 PIBF1Q8WXW3 757 aa12.28□□□□□ -0.44
CALD1-203ENST00000393118 NACAP1Q9BZK3 213 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms