RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 PAG1Q9NWQ8 432 aa24.11■■□□□ 1.45
PTPN11-202ENST00000392597 ITGA6P23229 1130 aa24.11■■□□□ 1.45
PTPN11-202ENST00000392597 RNF20Q5VTR2 975 aa24.11■■□□□ 1.45
PTPN11-202ENST00000392597 CREB3L3Q68CJ9 461 aa24.11■■□□□ 1.45
PTPN11-202ENST00000392597 CAMTA2O94983 1202 aa24.1■■□□□ 1.45
PTPN11-202ENST00000392597 KCNJ4P48050 445 aa24.1■■□□□ 1.45
PTPN11-202ENST00000392597 GREM2Q9H772 168 aa24.1■■□□□ 1.45
PTPN11-202ENST00000392597 ZSWIM6Q9HCJ5 1215 aa24.1■■□□□ 1.45
PTPN11-202ENST00000392597 HMG20BQ9P0W2 317 aa24.1■■□□□ 1.45
PTPN11-202ENST00000392597 RIPOR2Q9Y4F9 1068 aa24.1■■□□□ 1.45
PTPN11-202ENST00000392597 RIC1Q4ADV7 1423 aa24.09■■□□□ 1.45
PTPN11-202ENST00000392597 ABCC12Q96J65 1359 aa24.09■■□□□ 1.45
PTPN11-202ENST00000392597 SH3TC1Q8TE82 1336 aa24.09■■□□□ 1.45
PTPN11-202ENST00000392597 TAF5LO75529 589 aa24.09■■□□□ 1.45
PTPN11-202ENST00000392597 LY75O60449 1722 aa24.09■■□□□ 1.45
PTPN11-202ENST00000392597 CASTP20810 708 aaKnown RBP24.09■■□□□ 1.45
PTPN11-202ENST00000392597 VPS53Q5VIR6 699 aa24.09■■□□□ 1.45
PTPN11-202ENST00000392597 ZNF589Q86UQ0 364 aaPredicted RBP24.09■■□□□ 1.45
PTPN11-202ENST00000392597 LRP5O75197 1615 aa24.08■■□□□ 1.45
PTPN11-202ENST00000392597 IFIT1P09914 478 aaKnown RBP24.08■■□□□ 1.45
PTPN11-202ENST00000392597 HSP90B1P14625 803 aaKnown RBP24.08■■□□□ 1.45
PTPN11-202ENST00000392597 TSGA10IPQ3SY00 556 aa24.08■■□□□ 1.45
PTPN11-202ENST00000392597 MCMDC2Q4G0Z9 681 aa24.08■■□□□ 1.45
PTPN11-202ENST00000392597 CCDC158Q5M9N0 1113 aa24.08■■□□□ 1.45
PTPN11-202ENST00000392597 USPL1Q5W0Q7 1092 aa24.08■■□□□ 1.45
PTPN11-202ENST00000392597 DDX46Q7L014 1031 aaKnown RBP24.08■■□□□ 1.45
PTPN11-202ENST00000392597 RGPD3A6NKT7 1758 aaPredicted RBP24.08■■□□□ 1.44
PTPN11-202ENST00000392597 BCORQ6W2J9 1755 aa24.08■■□□□ 1.44
PTPN11-202ENST00000392597 RGPD4Q7Z3J3 1758 aa24.08■■□□□ 1.44
PTPN11-202ENST00000392597 RPAP1Q9BWH6 1393 aaPredicted RBP24.07■■□□□ 1.44
PTPN11-202ENST00000392597 SLC27A2O14975 620 aa24.07■■□□□ 1.44
PTPN11-202ENST00000392597 PLSCR1O15162 318 aa24.07■■□□□ 1.44
PTPN11-202ENST00000392597 LDHAL6AQ6ZMR3 332 aa24.07■■□□□ 1.44
PTPN11-202ENST00000392597 JAKMIP1Q96N16 626 aaKnown RBP24.07■■□□□ 1.44
PTPN11-202ENST00000392597 CCDC85AQ96PX6 553 aaPredicted RBP24.07■■□□□ 1.44
PTPN11-202ENST00000392597 LIMCH1Q9UPQ0 1083 aa24.07■■□□□ 1.44
PTPN11-202ENST00000392597 CYP46A1Q9Y6A2 500 aa24.07■■□□□ 1.44
PTPN11-202ENST00000392597 RGL2O15211 777 aa24.07■■□□□ 1.44
PTPN11-202ENST00000392597 PSMA5P28066 241 aa24.07■■□□□ 1.44
PTPN11-202ENST00000392597 XAGE2Q96GT9 111 aa24.07■■□□□ 1.44
PTPN11-202ENST00000392597 UTP14AQ9BVJ6 771 aaKnown RBP24.07■■□□□ 1.44
PTPN11-202ENST00000392597 NDUFB9Q9Y6M9 179 aa24.07■■□□□ 1.44
PTPN11-202ENST00000392597 GOLGA6L22H0YM25 854 aa24.06■■□□□ 1.44
PTPN11-202ENST00000392597 GOLIM4O00461 696 aa24.06■■□□□ 1.44
PTPN11-202ENST00000392597 TRAK2O60296 914 aa24.06■■□□□ 1.44
PTPN11-202ENST00000392597 APBA3O96018 575 aa24.06■■□□□ 1.44
PTPN11-202ENST00000392597 CCDC125Q86Z20 511 aa24.06■■□□□ 1.44
PTPN11-202ENST00000392597 HELLSQ9NRZ9 838 aa24.06■■□□□ 1.44
PTPN11-202ENST00000392597 LAMB2P55268 1798 aa24.06■■□□□ 1.44
PTPN11-202ENST00000392597 AK2P54819 239 aa24.05■■□□□ 1.44
PTPN11-202ENST00000392597 LRRFIP1Q32MZ4 808 aaKnown RBP24.05■■□□□ 1.44
PTPN11-202ENST00000392597 METTL24Q5JXM2 366 aa24.05■■□□□ 1.44
PTPN11-202ENST00000392597 SUSD4Q5VX71 490 aa24.05■■□□□ 1.44
PTPN11-202ENST00000392597 ZNF652Q9Y2D9 606 aa24.05■■□□□ 1.44
PTPN11-202ENST00000392597 ADCK5Q3MIX3 580 aa24.04■■□□□ 1.44
PTPN11-202ENST00000392597 GORABQ5T7V8 394 aa24.04■■□□□ 1.44
PTPN11-202ENST00000392597 ILDR2Q71H61 639 aa24.04■■□□□ 1.44
PTPN11-202ENST00000392597 RUFY3Q7L099 469 aa24.04■■□□□ 1.44
PTPN11-202ENST00000392597 CNTNAP4Q9C0A0 1308 aa24.04■■□□□ 1.44
PTPN11-202ENST00000392597 BAG4O95429 457 aaKnown RBP24.04■■□□□ 1.44
PTPN11-202ENST00000392597 SF3B2Q13435 895 aaKnown RBP24.04■■□□□ 1.44
PTPN11-202ENST00000392597 ATP2B3Q16720 1220 aa24.04■■□□□ 1.44
PTPN11-202ENST00000392597 SKOR2Q2VWA4 1001 aaPredicted RBP24.04■■□□□ 1.44
PTPN11-202ENST00000392597 TTC39AQ5SRH9 613 aa24.04■■□□□ 1.44
PTPN11-202ENST00000392597 CLEC4GQ6UXB4 293 aa24.04■■□□□ 1.44
PTPN11-202ENST00000392597 CNNM1Q9NRU3 951 aa24.04■■□□□ 1.44
PTPN11-202ENST00000392597 PDRG1Q9NUG6 133 aa24.04■■□□□ 1.44
PTPN11-202ENST00000392597 U3KPZ7 1027 aaPredicted RBP24.04■■□□□ 1.44
PTPN11-202ENST00000392597 NOL8Q76FK4 1167 aaKnown RBP24.03■■□□□ 1.44
PTPN11-202ENST00000392597 VGLL2Q8N8G2 317 aa24.03■■□□□ 1.44
PTPN11-202ENST00000392597 RTL9Q8NET4 1388 aa24.03■■□□□ 1.44
PTPN11-202ENST00000392597 KRT32Q14532 448 aa24.02■■□□□ 1.44
PTPN11-202ENST00000392597 ZMYM1Q5SVZ6 1142 aa24.02■■□□□ 1.44
PTPN11-202ENST00000392597 ZNF512BQ96KM6 892 aaPredicted RBP24.02■■□□□ 1.44
PTPN11-202ENST00000392597 ZSCAN31Q96LW9 406 aaPredicted RBP24.02■■□□□ 1.44
PTPN11-202ENST00000392597 DDX60Q8IY21 1712 aaKnown RBP24.02■■□□□ 1.44
PTPN11-202ENST00000392597 ADORA1P30542 326 aa24.02■■□□□ 1.44
PTPN11-202ENST00000392597 PKP1Q13835 747 aa24.02■■□□□ 1.44
PTPN11-202ENST00000392597 ALDH8A1Q9H2A2 487 aaPredicted RBP24.02■■□□□ 1.44
PTPN11-202ENST00000392597 SH2B1Q9NRF2 756 aaPredicted RBP24.02■■□□□ 1.44
PTPN11-202ENST00000392597 LINC00116Q8NCU8 138 aa24.01■■□□□ 1.43
PTPN11-202ENST00000392597 ZDHHC9Q9Y397 364 aa24.01■■□□□ 1.43
PTPN11-202ENST00000392597 MROH5Q6ZUA9 1318 aa24.01■■□□□ 1.43
PTPN11-202ENST00000392597 RNF113AO15541 343 aaKnown RBP24■■□□□ 1.43
PTPN11-202ENST00000392597 NTSR2O95665 410 aa24■■□□□ 1.43
PTPN11-202ENST00000392597 ZFYP08048 801 aaPredicted RBP24■■□□□ 1.43
PTPN11-202ENST00000392597 SLC27A3Q5K4L6 730 aa24■■□□□ 1.43
PTPN11-202ENST00000392597 NIP7Q9Y221 180 aaKnown RBP eCLIP24■■□□□ 1.43
PTPN11-202ENST00000392597 PDE8BO95263 885 aa24■■□□□ 1.43
PTPN11-202ENST00000392597 CCNL1Q9UK58 526 aaPredicted RBP24■■□□□ 1.43
PTPN11-202ENST00000392597 ZSCAN21Q9Y5A6 473 aaPredicted RBP24■■□□□ 1.43
PTPN11-202ENST00000392597 BAG6P46379 1132 aa23.99■■□□□ 1.43
PTPN11-202ENST00000392597 RC3H1Q5TC82 1133 aaKnown RBP23.99■■□□□ 1.43
PTPN11-202ENST00000392597 DSCC1Q9BVC3 393 aa23.99■■□□□ 1.43
PTPN11-202ENST00000392597 ARAP2Q8WZ64 1704 aa23.98■■□□□ 1.43
PTPN11-202ENST00000392597 BRD1O95696 1058 aa23.98■■□□□ 1.43
PTPN11-202ENST00000392597 ANKRD1Q15327 319 aa23.98■■□□□ 1.43
PTPN11-202ENST00000392597 CCDC152Q4G0S7 254 aa23.98■■□□□ 1.43
PTPN11-202ENST00000392597 BLOC1S2Q6QNY1 142 aa23.98■■□□□ 1.43
PTPN11-202ENST00000392597 SEC62Q99442 399 aaKnown RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms