RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 VGLL2Q8N8G2 317 aa25.77■■□□□ 1.72
SPHK1-202ENST00000392496 KBTBD3Q8NAB2 608 aa25.77■■□□□ 1.72
SPHK1-202ENST00000392496 SPRYD3Q8NCJ5 442 aa25.77■■□□□ 1.72
SPHK1-202ENST00000392496 ABCC12Q96J65 1359 aa25.77■■□□□ 1.72
SPHK1-202ENST00000392496 APBA3O96018 575 aa25.77■■□□□ 1.72
SPHK1-202ENST00000392496 IFIT1P09914 478 aaKnown RBP25.77■■□□□ 1.72
SPHK1-202ENST00000392496 NBR1Q14596 966 aa25.77■■□□□ 1.72
SPHK1-202ENST00000392496 ATP2B3Q16720 1220 aa25.77■■□□□ 1.72
SPHK1-202ENST00000392496 MROH5Q6ZUA9 1318 aa25.76■■□□□ 1.71
SPHK1-202ENST00000392496 A0A0D9SFI3 127 aa25.76■■□□□ 1.71
SPHK1-202ENST00000392496 ZPR1O75312 459 aa25.76■■□□□ 1.71
SPHK1-202ENST00000392496 USPL1Q5W0Q7 1092 aa25.76■■□□□ 1.71
SPHK1-202ENST00000392496 PAG1Q9NWQ8 432 aa25.76■■□□□ 1.71
SPHK1-202ENST00000392496 MED23Q9ULK4 1368 aa25.76■■□□□ 1.71
SPHK1-202ENST00000392496 CCDC171Q6TFL3 1326 aa25.75■■□□□ 1.71
SPHK1-202ENST00000392496 GORABQ5T7V8 394 aa25.75■■□□□ 1.71
SPHK1-202ENST00000392496 COL24A1Q17RW2 1714 aa25.75■■□□□ 1.71
SPHK1-202ENST00000392496 PDE8BO95263 885 aa25.74■■□□□ 1.71
SPHK1-202ENST00000392496 ADORA1P30542 326 aa25.74■■□□□ 1.71
SPHK1-202ENST00000392496 TTC39AQ5SRH9 613 aa25.74■■□□□ 1.71
SPHK1-202ENST00000392496 TBC1D9BQ66K14 1250 aa25.74■■□□□ 1.71
SPHK1-202ENST00000392496 CHMP5Q9NZZ3 219 aa25.74■■□□□ 1.71
SPHK1-202ENST00000392496 BAG6P46379 1132 aa25.74■■□□□ 1.71
SPHK1-202ENST00000392496 PTH1RQ03431 593 aa25.74■■□□□ 1.71
SPHK1-202ENST00000392496 DDX46Q7L014 1031 aaKnown RBP25.74■■□□□ 1.71
SPHK1-202ENST00000392496 NDUFB9Q9Y6M9 179 aa25.74■■□□□ 1.71
SPHK1-202ENST00000392496 DDIT3P35638 169 aa25.73■■□□□ 1.71
SPHK1-202ENST00000392496 MCM2P49736 904 aa25.73■■□□□ 1.71
SPHK1-202ENST00000392496 NEK4P51957 841 aa25.73■■□□□ 1.71
SPHK1-202ENST00000392496 ARHGEF1Q92888 912 aaKnown RBP25.73■■□□□ 1.71
SPHK1-202ENST00000392496 NYXQ9GZU5 481 aa25.73■■□□□ 1.71
SPHK1-202ENST00000392496 GOLIM4O00461 696 aa25.72■■□□□ 1.71
SPHK1-202ENST00000392496 ERFEQ4G0M1 354 aa25.72■■□□□ 1.71
SPHK1-202ENST00000392496 SLC10A5Q5PT55 438 aa25.72■■□□□ 1.71
SPHK1-202ENST00000392496 SMIM5Q71RC9 77 aa25.72■■□□□ 1.71
SPHK1-202ENST00000392496 KCNB2Q92953 911 aa25.72■■□□□ 1.71
SPHK1-202ENST00000392496 SRP68Q9UHB9 627 aaKnown RBP25.72■■□□□ 1.71
SPHK1-202ENST00000392496 SNX14Q9Y5W7 946 aa25.72■■□□□ 1.71
SPHK1-202ENST00000392496 C4AP0C0L4 1744 aa25.72■■□□□ 1.71
SPHK1-202ENST00000392496 PLSCR1O15162 318 aa25.72■■□□□ 1.71
SPHK1-202ENST00000392496 SF3B3Q15393 1217 aaKnown RBP25.72■■□□□ 1.71
SPHK1-202ENST00000392496 NFKBIBQ15653 356 aa25.72■■□□□ 1.71
SPHK1-202ENST00000392496 MAP4K1Q92918 833 aa25.72■■□□□ 1.71
SPHK1-202ENST00000392496 MPHOSPH8Q99549 860 aa25.72■■□□□ 1.71
SPHK1-202ENST00000392496 HSP90AA1P07900 732 aaKnown RBP25.71■■□□□ 1.71
SPHK1-202ENST00000392496 ZNF512BQ96KM6 892 aaPredicted RBP25.71■■□□□ 1.71
SPHK1-202ENST00000392496 SETDB2Q96T68 719 aa25.71■■□□□ 1.71
SPHK1-202ENST00000392496 SEC31BQ9NQW1 1179 aa25.71■■□□□ 1.71
SPHK1-202ENST00000392496 CIZ1Q9ULV3 898 aaPredicted RBP25.71■■□□□ 1.71
SPHK1-202ENST00000392496 ARAP2Q8WZ64 1704 aa25.7■■□□□ 1.71
SPHK1-202ENST00000392496 IGHMBP2P38935 993 aaKnown RBP25.7■■□□□ 1.7
SPHK1-202ENST00000392496 SLC27A3Q5K4L6 730 aa25.7■■□□□ 1.7
SPHK1-202ENST00000392496 TRAPPC3LQ5T215 181 aa25.7■■□□□ 1.7
SPHK1-202ENST00000392496 BICDL1Q6ZP65 573 aa25.7■■□□□ 1.7
SPHK1-202ENST00000392496 LRRC4BQ9NT99 713 aa25.7■■□□□ 1.7
SPHK1-202ENST00000392496 ADRA2BP18089 450 aa25.69■■□□□ 1.7
SPHK1-202ENST00000392496 NECTIN1Q15223 517 aa25.69■■□□□ 1.7
SPHK1-202ENST00000392496 PUM3Q15397 648 aaKnown RBP25.69■■□□□ 1.7
SPHK1-202ENST00000392496 ILDR2Q71H61 639 aa25.69■■□□□ 1.7
SPHK1-202ENST00000392496 FGFR2P21802 821 aa25.69■■□□□ 1.7
SPHK1-202ENST00000392496 AMIGO3Q86WK7 504 aa25.69■■□□□ 1.7
SPHK1-202ENST00000392496 LPIN2Q92539 896 aa25.69■■□□□ 1.7
SPHK1-202ENST00000392496 RBM8AQ9Y5S9 174 aaKnown RBP25.69■■□□□ 1.7
SPHK1-202ENST00000392496 CASZ1Q86V15 1759 aa25.68■■□□□ 1.7
SPHK1-202ENST00000392496 MCMDC2Q4G0Z9 681 aa25.68■■□□□ 1.7
SPHK1-202ENST00000392496 RASEFQ8IZ41 740 aa25.68■■□□□ 1.7
SPHK1-202ENST00000392496 CDC5LQ99459 802 aaKnown RBP25.68■■□□□ 1.7
SPHK1-202ENST00000392496 HELLSQ9NRZ9 838 aa25.68■■□□□ 1.7
SPHK1-202ENST00000392496 GTF2E1P29083 439 aaPredicted RBP25.67■■□□□ 1.7
SPHK1-202ENST00000392496 RFC4P35249 363 aa25.67■■□□□ 1.7
SPHK1-202ENST00000392496 LRRFIP1Q32MZ4 808 aaKnown RBP25.67■■□□□ 1.7
SPHK1-202ENST00000392496 ZNF589Q86UQ0 364 aaPredicted RBP25.67■■□□□ 1.7
SPHK1-202ENST00000392496 TAF5LO75529 589 aa25.67■■□□□ 1.7
SPHK1-202ENST00000392496 UBR3Q6ZT12 1888 aa25.66■■□□□ 1.7
SPHK1-202ENST00000392496 PRPF40BQ6NWY9 871 aaKnown RBP25.66■■□□□ 1.7
SPHK1-202ENST00000392496 SSFA2P28290 1259 aa25.65■■□□□ 1.7
SPHK1-202ENST00000392496 KCNJ4P48050 445 aa25.65■■□□□ 1.7
SPHK1-202ENST00000392496 FKBP4Q02790 459 aaKnown RBP eCLIP25.65■■□□□ 1.7
SPHK1-202ENST00000392496 ZMYM1Q5SVZ6 1142 aa25.65■■□□□ 1.7
SPHK1-202ENST00000392496 NBPF5PQ86XG9 351 aaPredicted RBP25.65■■□□□ 1.7
SPHK1-202ENST00000392496 TM6SF1Q9BZW5 370 aa25.65■■□□□ 1.7
SPHK1-202ENST00000392496 RNF113AO15541 343 aaKnown RBP25.64■■□□□ 1.7
SPHK1-202ENST00000392496 SLC5A1P13866 664 aa25.64■■□□□ 1.7
SPHK1-202ENST00000392496 ZKSCAN1P17029 563 aaPredicted RBP25.64■■□□□ 1.7
SPHK1-202ENST00000392496 CREB3L3Q68CJ9 461 aa25.64■■□□□ 1.7
SPHK1-202ENST00000392496 TPTE2Q6XPS3 522 aa25.64■■□□□ 1.7
SPHK1-202ENST00000392496 AKAP11Q9UKA4 1901 aa25.64■■□□□ 1.7
SPHK1-202ENST00000392496 UQCRFS1P1P0C7P4 283 aa25.64■■□□□ 1.69
SPHK1-202ENST00000392496 SCARF1Q14162 830 aa25.64■■□□□ 1.69
SPHK1-202ENST00000392496 UPF1Q92900 1129 aaKnown RBP eCLIP25.64■■□□□ 1.69
SPHK1-202ENST00000392496 UPF3BQ9BZI7 483 aaKnown RBP25.64■■□□□ 1.69
SPHK1-202ENST00000392496 PHF14O94880 888 aa25.63■■□□□ 1.69
SPHK1-202ENST00000392496 ARID4AP29374 1257 aaPredicted RBP25.63■■□□□ 1.69
SPHK1-202ENST00000392496 RNF20Q5VTR2 975 aa25.63■■□□□ 1.69
SPHK1-202ENST00000392496 C3orf67Q6ZVT6 689 aa25.63■■□□□ 1.69
SPHK1-202ENST00000392496 HELBQ8NG08 1087 aaPredicted RBP25.63■■□□□ 1.69
SPHK1-202ENST00000392496 TNS1Q9HBL0 1735 aaKnown RBP25.62■■□□□ 1.69
SPHK1-202ENST00000392496 ZFYP08048 801 aaPredicted RBP25.62■■□□□ 1.69
SPHK1-202ENST00000392496 ZAP70P43403 619 aa25.62■■□□□ 1.69
SPHK1-202ENST00000392496 ANKRD18AQ8IVF6 992 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms