RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
CCDC50-201ENST00000392455 WDR97A6NE52 1622 aa16.69■□□□□ 0.26
CCDC50-201ENST00000392455 RAPGEF3O95398 923 aa16.69■□□□□ 0.26
CCDC50-201ENST00000392455 KRT13P13646 458 aa16.69■□□□□ 0.26
CCDC50-201ENST00000392455 NEDD9Q14511 834 aa16.69■□□□□ 0.26
CCDC50-201ENST00000392455 SLC5A1P13866 664 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 MAP3K12Q12852 859 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 MPRIPQ6WCQ1 1025 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 KRT86O43790 486 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 IFIT5Q13325 482 aaKnown RBP16.68■□□□□ 0.26
CCDC50-201ENST00000392455 MCM6Q14566 821 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 CTAGE15A4D2H0 777 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 CTAGE8P0CG41 777 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 CTAGE4Q8IX94 777 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 ZSCAN16Q9H4T2 348 aaPredicted RBP16.68■□□□□ 0.26
CCDC50-201ENST00000392455 FAM169AQ9Y6X4 670 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 CCDC114Q96M63 670 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 C16orf45Q96MC5 204 aaPredicted RBP16.68■□□□□ 0.26
CCDC50-201ENST00000392455 VAV2P52735 878 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 PFDN4Q9NQP4 134 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCDC50-201ENST00000392455 CUL4BQ13620 913 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 TUBB2AQ13885 445 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 TUBB2BQ9BVA1 445 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 NKIRAS1Q9NYS0 192 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 SEPT8Q92599 483 aa16.68■□□□□ 0.26
CCDC50-201ENST00000392455 PPFIA1Q13136 1202 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 TTF1Q15361 905 aaPredicted RBP16.67■□□□□ 0.26
CCDC50-201ENST00000392455 CCDC38Q502W7 563 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 CAPZA3Q96KX2 299 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 THUMPD2Q9BTF0 503 aaKnown RBP16.67■□□□□ 0.26
CCDC50-201ENST00000392455 CEP57Q86XR8 500 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 ATRIPQ8WXE1 791 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 NBPF7P0C2Y1 421 aaPredicted RBP16.67■□□□□ 0.26
CCDC50-201ENST00000392455 TCERG1LQ5VWI1 586 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 CCDC62Q6P9F0 684 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 TSPYL2Q9H2G4 693 aaPredicted RBP16.67■□□□□ 0.26
CCDC50-201ENST00000392455 PUF60Q9UHX1 559 aaKnown RBP16.67■□□□□ 0.26
CCDC50-201ENST00000392455 CETN3O15182 167 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 MAP3K7CLP57077 242 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 THEGQ9P2T0 379 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 DAPK1P53355 1430 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 STK10O94804 968 aaKnown RBP16.67■□□□□ 0.26
CCDC50-201ENST00000392455 NBPF8Q3BBV2 869 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 SPC25Q9HBM1 224 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 DNA2P51530 1060 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 RILPL1Q5EBL4 403 aa16.67■□□□□ 0.26
CCDC50-201ENST00000392455 SYNJ1O43426 1573 aa16.66■□□□□ 0.26
CCDC50-201ENST00000392455 UBA7P41226 1012 aa16.66■□□□□ 0.26
CCDC50-201ENST00000392455 ZNF213O14771 459 aa16.66■□□□□ 0.26
CCDC50-201ENST00000392455 MAK16Q9BXY0 300 aaKnown RBP16.66■□□□□ 0.26
CCDC50-201ENST00000392455 PAXIP1Q6ZW49 1069 aaPredicted RBP16.66■□□□□ 0.26
CCDC50-201ENST00000392455 ANKRD24Q8TF21 1146 aa16.66■□□□□ 0.26
CCDC50-201ENST00000392455 MUM1L1Q5H9M0 696 aa16.66■□□□□ 0.26
CCDC50-201ENST00000392455 TIAM1Q13009 1591 aa16.66■□□□□ 0.26
CCDC50-201ENST00000392455 ZNF354CQ86Y25 554 aa16.66■□□□□ 0.26
CCDC50-201ENST00000392455 CALCOCO2Q13137 446 aa16.66■□□□□ 0.26
CCDC50-201ENST00000392455 INF2Q27J81 1249 aa16.66■□□□□ 0.26
CCDC50-201ENST00000392455 ZNF219Q9P2Y4 722 aaPredicted RBP16.65■□□□□ 0.26
CCDC50-201ENST00000392455 AKR1B10O60218 316 aa16.65■□□□□ 0.26
CCDC50-201ENST00000392455 ZNF365Q70YC5 407 aa16.65■□□□□ 0.26
CCDC50-201ENST00000392455 PDE4BQ07343 736 aa16.65■□□□□ 0.26
CCDC50-201ENST00000392455 TAF7Q15545 349 aaPredicted RBP16.65■□□□□ 0.26
CCDC50-201ENST00000392455 NLRP5P59047 1200 aa16.65■□□□□ 0.26
CCDC50-201ENST00000392455 PSPC1Q8WXF1 523 aaKnown RBP16.65■□□□□ 0.26
CCDC50-201ENST00000392455 ARAP1Q96P48 1450 aa16.65■□□□□ 0.26
CCDC50-201ENST00000392455 TMX1Q9H3N1 280 aa16.65■□□□□ 0.26
CCDC50-201ENST00000392455 Q9H521 79 aa16.65■□□□□ 0.26
CCDC50-201ENST00000392455 SDCCAG8Q86SQ7 713 aaPredicted RBP16.64■□□□□ 0.25
CCDC50-201ENST00000392455 TRMT112Q9UI30 125 aaKnown RBP16.64■□□□□ 0.25
CCDC50-201ENST00000392455 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
CCDC50-201ENST00000392455 NBPF11Q86T75 865 aa16.64■□□□□ 0.25
CCDC50-201ENST00000392455 FAN1Q9Y2M0 1017 aa16.64■□□□□ 0.25
CCDC50-201ENST00000392455 SPTY2D1Q68D10 685 aaPredicted RBP16.64■□□□□ 0.25
CCDC50-201ENST00000392455 CCDC8Q9H0W5 538 aaPredicted RBP16.64■□□□□ 0.25
CCDC50-201ENST00000392455 ADAMTS2O95450 1211 aa16.64■□□□□ 0.25
CCDC50-201ENST00000392455 WAPLQ7Z5K2 1190 aa16.64■□□□□ 0.25
CCDC50-201ENST00000392455 BICDL2A1A5D9 508 aa16.64■□□□□ 0.25
CCDC50-201ENST00000392455 CCDC26Q8TAB7 109 aa16.64■□□□□ 0.25
CCDC50-201ENST00000392455 KIF14Q15058 1648 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 PCK1P35558 622 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 ARHGAP25P42331 645 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 SLC8A3P57103 927 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 RBM27Q9P2N5 1060 aaKnown RBP16.63■□□□□ 0.25
CCDC50-201ENST00000392455 TNNC1P63316 161 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 MIER3Q7Z3K6 550 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 GOLGA8BA8MQT2 603 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 SLFN5Q08AF3 891 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 CCDC102BQ68D86 513 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 WHAMMQ8TF30 809 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 ZMAT2Q96NC0 199 aaKnown RBP16.63■□□□□ 0.25
CCDC50-201ENST00000392455 HMG20BQ9P0W2 317 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 BAG3O95817 575 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 IFIT3O14879 490 aaKnown RBP16.63■□□□□ 0.25
CCDC50-201ENST00000392455 CCT2P78371 535 aaKnown RBP16.63■□□□□ 0.25
CCDC50-201ENST00000392455 GEN1Q17RS7 908 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 SLC4A8Q2Y0W8 1093 aa16.63■□□□□ 0.25
CCDC50-201ENST00000392455 UBE2HP62256 183 aa16.62■□□□□ 0.25
CCDC50-201ENST00000392455 PDCD2Q16342 344 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms