RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 GREM2Q9H772 168 aa23.94■■□□□ 1.42
CSNK1D-203ENST00000392334 CDHR2Q9BYE9 1310 aa23.94■■□□□ 1.42
CSNK1D-203ENST00000392334 MCM2P49736 904 aa23.94■■□□□ 1.42
CSNK1D-203ENST00000392334 ATG9AQ7Z3C6 839 aa23.94■■□□□ 1.42
CSNK1D-203ENST00000392334 TTLL11Q8NHH1 800 aa23.94■■□□□ 1.42
CSNK1D-203ENST00000392334 UTP14AQ9BVJ6 771 aaKnown RBP23.94■■□□□ 1.42
CSNK1D-203ENST00000392334 PLA2G12BQ9BX93 195 aa23.94■■□□□ 1.42
CSNK1D-203ENST00000392334 CSF1RP07333 972 aa23.93■■□□□ 1.42
CSNK1D-203ENST00000392334 ADRA2BP18089 450 aa23.93■■□□□ 1.42
CSNK1D-203ENST00000392334 CTSWP56202 376 aa23.93■■□□□ 1.42
CSNK1D-203ENST00000392334 ANP32BQ92688 251 aaKnown RBP23.93■■□□□ 1.42
CSNK1D-203ENST00000392334 IL17RAQ96F46 866 aa23.93■■□□□ 1.42
CSNK1D-203ENST00000392334 TAF7LQ5H9L4 462 aa23.93■■□□□ 1.42
CSNK1D-203ENST00000392334 ZDHHC9Q9Y397 364 aa23.93■■□□□ 1.42
CSNK1D-203ENST00000392334 IFIT5Q13325 482 aaKnown RBP23.92■■□□□ 1.42
CSNK1D-203ENST00000392334 PKP1Q13835 747 aa23.92■■□□□ 1.42
CSNK1D-203ENST00000392334 ZSCAN23Q3MJ62 389 aa23.92■■□□□ 1.42
CSNK1D-203ENST00000392334 ZGPATQ8N5A5 531 aaKnown RBP23.92■■□□□ 1.42
CSNK1D-203ENST00000392334 ECHDC1Q9NTX5 307 aa23.92■■□□□ 1.42
CSNK1D-203ENST00000392334 SH3TC1Q8TE82 1336 aa23.91■■□□□ 1.42
CSNK1D-203ENST00000392334 ITGA6P23229 1130 aa23.91■■□□□ 1.42
CSNK1D-203ENST00000392334 EYA2O00167 538 aa23.91■■□□□ 1.42
CSNK1D-203ENST00000392334 PDE8AO60658 829 aa23.91■■□□□ 1.42
CSNK1D-203ENST00000392334 TNNI3KQ59H18 835 aa23.91■■□□□ 1.42
CSNK1D-203ENST00000392334 UBE2Q2Q8WVN8 375 aa23.91■■□□□ 1.42
CSNK1D-203ENST00000392334 FPGT-TNNI3KV9GXZ4 949 aa23.91■■□□□ 1.42
CSNK1D-203ENST00000392334 AOX1Q06278 1338 aa23.9■■□□□ 1.42
CSNK1D-203ENST00000392334 ANAPC15P60006 121 aa23.9■■□□□ 1.42
CSNK1D-203ENST00000392334 PARP10Q53GL7 1025 aa23.9■■□□□ 1.42
CSNK1D-203ENST00000392334 ESYT1Q9BSJ8 1104 aa23.9■■□□□ 1.42
CSNK1D-203ENST00000392334 TTC41PQ6P2S7 1318 aa23.9■■□□□ 1.42
CSNK1D-203ENST00000392334 HS1BP3Q53T59 392 aa23.89■■□□□ 1.42
CSNK1D-203ENST00000392334 COL23A1Q86Y22 540 aaPredicted RBP23.89■■□□□ 1.42
CSNK1D-203ENST00000392334 NTSR2O95665 410 aa23.89■■□□□ 1.41
CSNK1D-203ENST00000392334 GYS1P13807 737 aa23.89■■□□□ 1.41
CSNK1D-203ENST00000392334 CAVIN1Q6NZI2 390 aaKnown RBP23.89■■□□□ 1.41
CSNK1D-203ENST00000392334 GPATCH3Q96I76 525 aa23.89■■□□□ 1.41
CSNK1D-203ENST00000392334 DBNLQ9UJU6 430 aaKnown RBP23.89■■□□□ 1.41
CSNK1D-203ENST00000392334 EPB41L2O43491 1005 aaKnown RBP23.88■■□□□ 1.41
CSNK1D-203ENST00000392334 HMGB2P26583 209 aaKnown RBP23.88■■□□□ 1.41
CSNK1D-203ENST00000392334 IL15P40933 162 aaPredicted RBP23.88■■□□□ 1.41
CSNK1D-203ENST00000392334 TIMM10P62072 90 aa23.88■■□□□ 1.41
CSNK1D-203ENST00000392334 CUL4AQ13619 759 aa23.88■■□□□ 1.41
CSNK1D-203ENST00000392334 ZSCAN30Q86W11 494 aa23.88■■□□□ 1.41
CSNK1D-203ENST00000392334 NEUROD6Q96NK8 337 aa23.88■■□□□ 1.41
CSNK1D-203ENST00000392334 GLRX3O76003 335 aaKnown RBP23.88■■□□□ 1.41
CSNK1D-203ENST00000392334 DBNDD2Q9BQY9 259 aa23.88■■□□□ 1.41
CSNK1D-203ENST00000392334 BOLA2Q9H3K6 86 aa23.88■■□□□ 1.41
CSNK1D-203ENST00000392334 MCCP23508 829 aa23.87■■□□□ 1.41
CSNK1D-203ENST00000392334 SETDB2Q96T68 719 aa23.87■■□□□ 1.41
CSNK1D-203ENST00000392334 PNPLA7Q6ZV29 1317 aa23.87■■□□□ 1.41
CSNK1D-203ENST00000392334 SLC15A2Q16348 729 aa23.86■■□□□ 1.41
CSNK1D-203ENST00000392334 ANKRD18BA2A2Z9 1011 aa23.86■■□□□ 1.41
CSNK1D-203ENST00000392334 ERFEQ4G0M1 354 aa23.86■■□□□ 1.41
CSNK1D-203ENST00000392334 CCDC24Q8N4L8 307 aa23.86■■□□□ 1.41
CSNK1D-203ENST00000392334 GPT2Q8TD30 523 aa23.86■■□□□ 1.41
CSNK1D-203ENST00000392334 TMX3Q96JJ7 454 aa23.86■■□□□ 1.41
CSNK1D-203ENST00000392334 RGL2O15211 777 aa23.85■■□□□ 1.41
CSNK1D-203ENST00000392334 NFIXQ14938 502 aa23.85■■□□□ 1.41
CSNK1D-203ENST00000392334 LDHAL6AQ6ZMR3 332 aa23.85■■□□□ 1.41
CSNK1D-203ENST00000392334 CCDC125Q86Z20 511 aa23.85■■□□□ 1.41
CSNK1D-203ENST00000392334 INTS4Q96HW7 963 aaKnown RBP23.85■■□□□ 1.41
CSNK1D-203ENST00000392334 NDUFB9Q9Y6M9 179 aa23.85■■□□□ 1.41
CSNK1D-203ENST00000392334 PRPF40AO75400 957 aaKnown RBP23.84■■□□□ 1.41
CSNK1D-203ENST00000392334 CHMLP26374 656 aa23.84■■□□□ 1.41
CSNK1D-203ENST00000392334 NEK4P51957 841 aa23.84■■□□□ 1.41
CSNK1D-203ENST00000392334 CNTROBQ8N137 903 aa23.84■■□□□ 1.41
CSNK1D-203ENST00000392334 PDLIM2Q96JY6 352 aa23.84■■□□□ 1.41
CSNK1D-203ENST00000392334 SEC31BQ9NQW1 1179 aa23.84■■□□□ 1.41
CSNK1D-203ENST00000392334 CIAO1O76071 339 aa23.84■■□□□ 1.41
CSNK1D-203ENST00000392334 NCLP19338 710 aaKnown RBP23.84■■□□□ 1.41
CSNK1D-203ENST00000392334 GTF2E1P29083 439 aaPredicted RBP23.84■■□□□ 1.41
CSNK1D-203ENST00000392334 BRD1O95696 1058 aa23.83■■□□□ 1.41
CSNK1D-203ENST00000392334 CEP126Q9P2H0 1117 aa23.83■■□□□ 1.41
CSNK1D-203ENST00000392334 MBD3O95983 291 aa23.83■■□□□ 1.4
CSNK1D-203ENST00000392334 CNNM1Q9NRU3 951 aa23.83■■□□□ 1.4
CSNK1D-203ENST00000392334 STK32BQ9NY57 414 aa23.83■■□□□ 1.4
CSNK1D-203ENST00000392334 MYH3P11055 1940 aa23.82■■□□□ 1.4
CSNK1D-203ENST00000392334 EDC3Q96F86 508 aaKnown RBP23.82■■□□□ 1.4
CSNK1D-203ENST00000392334 RBSNQ9H1K0 784 aa23.82■■□□□ 1.4
CSNK1D-203ENST00000392334 COL24A1Q17RW2 1714 aa23.81■■□□□ 1.4
CSNK1D-203ENST00000392334 DDX60Q8IY21 1712 aaKnown RBP23.81■■□□□ 1.4
CSNK1D-203ENST00000392334 A0A1B0GUL7 405 aa23.81■■□□□ 1.4
CSNK1D-203ENST00000392334 C3orf67Q6ZVT6 689 aa23.81■■□□□ 1.4
CSNK1D-203ENST00000392334 NBPF5PQ86XG9 351 aaPredicted RBP23.81■■□□□ 1.4
CSNK1D-203ENST00000392334 UPF1Q92900 1129 aaKnown RBP eCLIP23.81■■□□□ 1.44e-7■■■■■ 31.7
CSNK1D-203ENST00000392334 IL25Q9H293 177 aa23.81■■□□□ 1.4
CSNK1D-203ENST00000392334 TPM2P07951 284 aa23.81■■□□□ 1.4
CSNK1D-203ENST00000392334 LRSAM1Q6UWE0 723 aa23.81■■□□□ 1.4
CSNK1D-203ENST00000392334 PDGFDQ9GZP0 370 aaPredicted RBP23.81■■□□□ 1.4
CSNK1D-203ENST00000392334 METTL24Q5JXM2 366 aa23.8■■□□□ 1.4
CSNK1D-203ENST00000392334 FLAD1Q8NFF5 587 aa23.8■■□□□ 1.4
CSNK1D-203ENST00000392334 RIPOR2Q9Y4F9 1068 aa23.8■■□□□ 1.4
CSNK1D-203ENST00000392334 HELBQ8NG08 1087 aaPredicted RBP23.79■■□□□ 1.4
CSNK1D-203ENST00000392334 TM4SF1P30408 202 aa23.78■■□□□ 1.4
CSNK1D-203ENST00000392334 CCDC152Q4G0S7 254 aa23.78■■□□□ 1.4
CSNK1D-203ENST00000392334 MSL1Q68DK7 614 aa23.78■■□□□ 1.4
CSNK1D-203ENST00000392334 CWC27Q6UX04 472 aaKnown RBP23.78■■□□□ 1.4
CSNK1D-203ENST00000392334 DNAJC2Q99543 621 aaKnown RBP23.78■■□□□ 1.4
CSNK1D-203ENST00000392334 CARMIL3Q8ND23 1372 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms