RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 HOMER1Q86YM7 354 aa19.3■□□□□ 0.68
SNX9-201ENST00000392185 ANKARQ7Z5J8 1434 aa19.3■□□□□ 0.68
SNX9-201ENST00000392185 WASF1Q92558 559 aa19.29■□□□□ 0.68
SNX9-201ENST00000392185 SNX21Q969T3 373 aa19.29■□□□□ 0.68
SNX9-201ENST00000392185 PTPRMP28827 1452 aa19.29■□□□□ 0.68
SNX9-201ENST00000392185 ARHGEF40Q8TER5 1519 aa19.29■□□□□ 0.68
SNX9-201ENST00000392185 BAG3O95817 575 aa19.29■□□□□ 0.68
SNX9-201ENST00000392185 METAP2P50579 478 aaKnown RBP eCLIP19.29■□□□□ 0.68
SNX9-201ENST00000392185 SIRT2Q8IXJ6 389 aa19.29■□□□□ 0.68
SNX9-201ENST00000392185 IL27Q8NEV9 243 aa19.29■□□□□ 0.68
SNX9-201ENST00000392185 RBM27Q9P2N5 1060 aaKnown RBP19.29■□□□□ 0.68
SNX9-201ENST00000392185 CKAP2LQ8IYA6 745 aa19.29■□□□□ 0.68
SNX9-201ENST00000392185 ZNF287Q9HBT7 754 aa19.29■□□□□ 0.68
SNX9-201ENST00000392185 NEXMIFQ5QGS0 1516 aa19.29■□□□□ 0.68
SNX9-201ENST00000392185 PARP10Q53GL7 1025 aa19.29■□□□□ 0.68
SNX9-201ENST00000392185 VAT1LQ9HCJ6 419 aa19.29■□□□□ 0.68
SNX9-201ENST00000392185 QRICH2Q9H0J4 1663 aa19.28■□□□□ 0.68
SNX9-201ENST00000392185 RIMBP2O15034 1052 aa19.28■□□□□ 0.68
SNX9-201ENST00000392185 SGSM2O43147 1006 aa19.28■□□□□ 0.68
SNX9-201ENST00000392185 CNBD1Q8NA66 436 aa19.28■□□□□ 0.68
SNX9-201ENST00000392185 SLC26A6Q9BXS9 759 aa19.28■□□□□ 0.68
SNX9-201ENST00000392185 FAM13BQ9NYF5 915 aa19.28■□□□□ 0.68
SNX9-201ENST00000392185 LOC102724428A0A0B4J2F2 783 aa19.27■□□□□ 0.68
SNX9-201ENST00000392185 SIK1P57059 783 aa19.27■□□□□ 0.68
SNX9-201ENST00000392185 CATIPQ7Z7H3 387 aa19.27■□□□□ 0.68
SNX9-201ENST00000392185 ADAMTS13Q76LX8 1427 aa19.27■□□□□ 0.68
SNX9-201ENST00000392185 SSBP05455 408 aaKnown RBP eCLIP19.27■□□□□ 0.68
SNX9-201ENST00000392185 FAM43AQ8N2R8 423 aa19.27■□□□□ 0.68
SNX9-201ENST00000392185 CRNKL1Q9BZJ0 848 aaKnown RBP19.27■□□□□ 0.68
SNX9-201ENST00000392185 KIF24Q5T7B8 1368 aa19.27■□□□□ 0.67
SNX9-201ENST00000392185 ZHX3Q9H4I2 956 aa19.27■□□□□ 0.67
SNX9-201ENST00000392185 MAP3K11Q16584 847 aa19.26■□□□□ 0.67
SNX9-201ENST00000392185 SPTY2D1Q68D10 685 aaPredicted RBP19.26■□□□□ 0.67
SNX9-201ENST00000392185 ZC3H12CQ9C0D7 883 aaKnown RBP19.26■□□□□ 0.67
SNX9-201ENST00000392185 KDRP35968 1356 aa19.26■□□□□ 0.67
SNX9-201ENST00000392185 PRC1O43663 620 aa19.26■□□□□ 0.67
SNX9-201ENST00000392185 APOBRQ0VD83 1088 aa19.26■□□□□ 0.67
SNX9-201ENST00000392185 LRRC24Q50LG9 513 aa19.26■□□□□ 0.67
SNX9-201ENST00000392185 PDIA4P13667 645 aaKnown RBP19.26■□□□□ 0.67
SNX9-201ENST00000392185 RXRAP19793 462 aa19.26■□□□□ 0.67
SNX9-201ENST00000392185 PANK2Q9BZ23 570 aa19.26■□□□□ 0.67
SNX9-201ENST00000392185 RBM25P49756 843 aaKnown RBP19.25■□□□□ 0.67
SNX9-201ENST00000392185 SSRP1Q08945 709 aaKnown RBP19.25■□□□□ 0.67
SNX9-201ENST00000392185 CCDC96Q2M329 555 aa19.25■□□□□ 0.67
SNX9-201ENST00000392185 NOC3LQ8WTT2 800 aaKnown RBP19.25■□□□□ 0.67
SNX9-201ENST00000392185 SETBP1Q9Y6X0 1596 aa19.25■□□□□ 0.67
SNX9-201ENST00000392185 IPO7O95373 1038 aaKnown RBP19.25■□□□□ 0.67
SNX9-201ENST00000392185 PNPLA6Q8IY17 1366 aa19.25■□□□□ 0.67
SNX9-201ENST00000392185 PDE4BQ07343 736 aa19.25■□□□□ 0.67
SNX9-201ENST00000392185 WTAPQ15007 396 aa19.25■□□□□ 0.67
SNX9-201ENST00000392185 ZBTB43O43298 467 aa19.25■□□□□ 0.67
SNX9-201ENST00000392185 CPSF1Q10570 1443 aaKnown RBP19.24■□□□□ 0.67
SNX9-201ENST00000392185 MBD4O95243 580 aa19.24■□□□□ 0.67
SNX9-201ENST00000392185 PIGBQ92521 554 aa19.24■□□□□ 0.67
SNX9-201ENST00000392185 SLF2Q8IX21 1173 aa19.24■□□□□ 0.67
SNX9-201ENST00000392185 KRT18P05783 430 aaKnown RBP19.24■□□□□ 0.67
SNX9-201ENST00000392185 ZSCAN22P10073 491 aaPredicted RBP19.24■□□□□ 0.67
SNX9-201ENST00000392185 ZAP70P43403 619 aa19.24■□□□□ 0.67
SNX9-201ENST00000392185 KBTBD3Q8NAB2 608 aa19.24■□□□□ 0.67
SNX9-201ENST00000392185 PICALMQ13492 652 aa19.23■□□□□ 0.67
SNX9-201ENST00000392185 DHX8Q14562 1220 aaKnown RBP19.23■□□□□ 0.67
SNX9-201ENST00000392185 PUS3Q9BZE2 481 aaKnown RBP19.23■□□□□ 0.67
SNX9-201ENST00000392185 PUM3Q15397 648 aaKnown RBP19.23■□□□□ 0.67
SNX9-201ENST00000392185 UNC5CLQ8IV45 518 aa19.23■□□□□ 0.67
SNX9-201ENST00000392185 CNPY2Q9Y2B0 182 aa19.23■□□□□ 0.67
SNX9-201ENST00000392185 MAGEB6P1A0A0J9YX57 407 aa19.22■□□□□ 0.67
SNX9-201ENST00000392185 SERPINC1P01008 464 aa19.22■□□□□ 0.67
SNX9-201ENST00000392185 NLRP5P59047 1200 aa19.22■□□□□ 0.67
SNX9-201ENST00000392185 FILIP1Q7Z7B0 1213 aa19.22■□□□□ 0.67
SNX9-201ENST00000392185 CCDC39Q9UFE4 941 aa19.22■□□□□ 0.67
SNX9-201ENST00000392185 PIK3C2BO00750 1634 aa19.22■□□□□ 0.67
SNX9-201ENST00000392185 AGLP35573 1532 aa19.22■□□□□ 0.67
SNX9-201ENST00000392185 DIP2BQ9P265 1576 aa19.22■□□□□ 0.67
SNX9-201ENST00000392185 ZKSCAN3Q9BRR0 538 aa19.22■□□□□ 0.67
SNX9-201ENST00000392185 ESR2Q92731 530 aa19.22■□□□□ 0.67
SNX9-201ENST00000392185 SEC63Q9UGP8 760 aaKnown RBP19.22■□□□□ 0.67
SNX9-201ENST00000392185 FSIP1Q8NA03 581 aa19.22■□□□□ 0.67
SNX9-201ENST00000392185 SEC62Q99442 399 aaKnown RBP19.22■□□□□ 0.67
SNX9-201ENST00000392185 DHX32Q7L7V1 743 aaKnown RBP19.21■□□□□ 0.67
SNX9-201ENST00000392185 MCM9Q9NXL9 1143 aa19.21■□□□□ 0.67
SNX9-201ENST00000392185 SNX14Q9Y5W7 946 aa19.21■□□□□ 0.67
SNX9-201ENST00000392185 DNM1Q05193 864 aaKnown RBP19.21■□□□□ 0.67
SNX9-201ENST00000392185 CCDC173Q0VFZ6 552 aa19.21■□□□□ 0.67
SNX9-201ENST00000392185 CEP57L1Q8IYX8 460 aa19.21■□□□□ 0.67
SNX9-201ENST00000392185 CRKLP46109 303 aaKnown RBP19.2■□□□□ 0.66
SNX9-201ENST00000392185 RUFY3Q7L099 469 aa19.2■□□□□ 0.66
SNX9-201ENST00000392185 KAT14Q9H8E8 782 aa19.2■□□□□ 0.66
SNX9-201ENST00000392185 PARP3Q9Y6F1 533 aa19.2■□□□□ 0.66
SNX9-201ENST00000392185 SLC27A2O14975 620 aa19.2■□□□□ 0.66
SNX9-201ENST00000392185 GPAA1O43292 621 aa19.2■□□□□ 0.66
SNX9-201ENST00000392185 TLR7Q9NYK1 1049 aaKnown RBP19.2■□□□□ 0.66
SNX9-201ENST00000392185 IBTKQ9P2D0 1353 aaPredicted RBP19.19■□□□□ 0.66
SNX9-201ENST00000392185 CCDC183Q5T5S1 534 aa19.19■□□□□ 0.66
SNX9-201ENST00000392185 ALG1Q9BT22 464 aa19.19■□□□□ 0.66
SNX9-201ENST00000392185 ARMT1Q9H993 441 aa19.19■□□□□ 0.66
SNX9-201ENST00000392185 BIN1O00499 593 aa19.19■□□□□ 0.66
SNX9-201ENST00000392185 CTSWP56202 376 aa19.19■□□□□ 0.66
SNX9-201ENST00000392185 TTLL5Q6EMB2 1281 aa19.19■□□□□ 0.66
SNX9-201ENST00000392185 GIGYF2Q6Y7W6 1299 aaKnown RBP19.19■□□□□ 0.66
SNX9-201ENST00000392185 GREM2Q9H772 168 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms