RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 NRKQ7Z2Y5 1582 aa17.06■□□□□ 0.32
LRRFIP1-204ENST00000392000 RPS6KB1P23443 525 aa17.06■□□□□ 0.32
LRRFIP1-204ENST00000392000 GOLGA8FQ08AF8 430 aa17.06■□□□□ 0.32
LRRFIP1-204ENST00000392000 GOLGA8DPQ0D2H9 430 aa17.06■□□□□ 0.32
LRRFIP1-204ENST00000392000 DDX58O95786 925 aaKnown RBP17.06■□□□□ 0.32
LRRFIP1-204ENST00000392000 TOB2Q14106 344 aaPredicted RBP17.06■□□□□ 0.32
LRRFIP1-204ENST00000392000 LINS1Q8NG48 757 aa17.06■□□□□ 0.32
LRRFIP1-204ENST00000392000 CLSTN2Q9H4D0 955 aa17.06■□□□□ 0.32
LRRFIP1-204ENST00000392000 SETD1AO15047 1707 aaKnown RBP17.06■□□□□ 0.32
LRRFIP1-204ENST00000392000 TRHP20396 242 aaPredicted RBP17.06■□□□□ 0.32
LRRFIP1-204ENST00000392000 GNL2Q13823 731 aaKnown RBP17.06■□□□□ 0.32
LRRFIP1-204ENST00000392000 TMC6Q7Z403 805 aa17.06■□□□□ 0.32
LRRFIP1-204ENST00000392000 GOLIM4O00461 696 aa17.05■□□□□ 0.32
LRRFIP1-204ENST00000392000 ERC1Q8IUD2 1116 aa17.05■□□□□ 0.32
LRRFIP1-204ENST00000392000 DBNLQ9UJU6 430 aaKnown RBP17.05■□□□□ 0.32
LRRFIP1-204ENST00000392000 RGPD8O14715 1765 aaPredicted RBP17.05■□□□□ 0.32
LRRFIP1-204ENST00000392000 SMTNL1A8MU46 457 aa17.05■□□□□ 0.32
LRRFIP1-204ENST00000392000 SYT10Q6XYQ8 523 aa17.05■□□□□ 0.32
LRRFIP1-204ENST00000392000 GPHNQ9NQX3 736 aaPredicted RBP17.05■□□□□ 0.32
LRRFIP1-204ENST00000392000 LMOD1P29536 600 aaPredicted RBP17.05■□□□□ 0.32
LRRFIP1-204ENST00000392000 ZNF496Q96IT1 587 aaPredicted RBP17.05■□□□□ 0.32
LRRFIP1-204ENST00000392000 USP28Q96RU2 1077 aa17.05■□□□□ 0.32
LRRFIP1-204ENST00000392000 A0A087WZG4 1122 aa17.04■□□□□ 0.32
LRRFIP1-204ENST00000392000 ERCC6LQ2NKX8 1250 aa17.04■□□□□ 0.32
LRRFIP1-204ENST00000392000 ZNF594Q96JF6 807 aaPredicted RBP17.04■□□□□ 0.32
LRRFIP1-204ENST00000392000 GTF2F1P35269 517 aaKnown RBP eCLIP17.04■□□□□ 0.32
LRRFIP1-204ENST00000392000 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
LRRFIP1-204ENST00000392000 LRRC8AQ8IWT6 810 aa17.03■□□□□ 0.32
LRRFIP1-204ENST00000392000 GTPBP4Q9BZE4 634 aaKnown RBP17.03■□□□□ 0.32
LRRFIP1-204ENST00000392000 ANKRD1Q15327 319 aa17.03■□□□□ 0.32
LRRFIP1-204ENST00000392000 TAF5LO75529 589 aa17.02■□□□□ 0.32
LRRFIP1-204ENST00000392000 STK38Q15208 465 aa17.02■□□□□ 0.32
LRRFIP1-204ENST00000392000 BBXQ8WY36 941 aaPredicted RBP17.02■□□□□ 0.32
LRRFIP1-204ENST00000392000 ZSWIM4Q9H7M6 989 aa17.02■□□□□ 0.32
LRRFIP1-204ENST00000392000 ALDH1L1O75891 902 aa17.02■□□□□ 0.32
LRRFIP1-204ENST00000392000 ATP2B1P20020 1258 aa17.02■□□□□ 0.32
LRRFIP1-204ENST00000392000 MARCKSP29966 332 aaPredicted RBP17.02■□□□□ 0.32
LRRFIP1-204ENST00000392000 TTLL5Q6EMB2 1281 aa17.02■□□□□ 0.32
LRRFIP1-204ENST00000392000 LMBR1LQ6UX01 489 aa17.02■□□□□ 0.32
LRRFIP1-204ENST00000392000 EPC1Q9H2F5 836 aa17.02■□□□□ 0.32
LRRFIP1-204ENST00000392000 RXRAP19793 462 aa17.02■□□□□ 0.31
LRRFIP1-204ENST00000392000 FKBP4Q02790 459 aaKnown RBP eCLIP17.02■□□□□ 0.31
LRRFIP1-204ENST00000392000 ANKRD13DQ6ZTN6 518 aa17.02■□□□□ 0.31
LRRFIP1-204ENST00000392000 OGFRQ9NZT2 677 aa17.02■□□□□ 0.31
LRRFIP1-204ENST00000392000 IFNKQ9P0W0 207 aa17.02■□□□□ 0.31
LRRFIP1-204ENST00000392000 CFAP45Q9UL16 551 aa17.02■□□□□ 0.31
LRRFIP1-204ENST00000392000 AKAP12Q02952 1782 aa17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 CYP21A2P08686 494 aa17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 SCRN1Q12765 414 aa17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 CREBRFQ8IUR6 639 aa17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 GOLPH3LQ9H4A5 285 aa17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 CTNNA3Q9UI47 895 aa17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 PTPDC1A2A3K4 754 aa17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 NEURL1BA8MQ27 555 aa17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 GCKRQ14397 625 aa17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 WASHC4Q2M389 1173 aa17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 KMT5BQ4FZB7 885 aa17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 ZNF790Q6PG37 636 aa17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 PDILTQ8N807 584 aa17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 KIF18AQ8NI77 898 aa17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 DDX21Q9NR30 783 aaKnown RBP eCLIP17.01■□□□□ 0.31
LRRFIP1-204ENST00000392000 TTC5Q8N0Z6 440 aa17■□□□□ 0.31
LRRFIP1-204ENST00000392000 FBXO38Q6PIJ6 1188 aa17■□□□□ 0.31
LRRFIP1-204ENST00000392000 CEP57L1Q8IYX8 460 aa17■□□□□ 0.31
LRRFIP1-204ENST00000392000 LRRN4CLQ8ND94 238 aa17■□□□□ 0.31
LRRFIP1-204ENST00000392000 ZBTB3Q9H5J0 574 aa17■□□□□ 0.31
LRRFIP1-204ENST00000392000 ANKRD7Q92527 254 aa17■□□□□ 0.31
LRRFIP1-204ENST00000392000 CEMIPQ8WUJ3 1361 aa16.99■□□□□ 0.31
LRRFIP1-204ENST00000392000 DNAI1Q9UI46 699 aa16.99■□□□□ 0.31
LRRFIP1-204ENST00000392000 URI1O94763 535 aaPredicted RBP16.99■□□□□ 0.31
LRRFIP1-204ENST00000392000 SNW1Q13573 536 aaKnown RBP16.99■□□□□ 0.31
LRRFIP1-204ENST00000392000 PDIA6Q15084 440 aa16.99■□□□□ 0.31
LRRFIP1-204ENST00000392000 STX1AQ16623 288 aa16.99■□□□□ 0.31
LRRFIP1-204ENST00000392000 SKIDA1Q1XH10 827 aa16.99■□□□□ 0.31
LRRFIP1-204ENST00000392000 TM6SF1Q9BZW5 370 aa16.99■□□□□ 0.31
LRRFIP1-204ENST00000392000 TNNI3KQ59H18 835 aa16.98■□□□□ 0.31
LRRFIP1-204ENST00000392000 FPGT-TNNI3KV9GXZ4 949 aa16.98■□□□□ 0.31
LRRFIP1-204ENST00000392000 PXDNQ92626 1479 aa16.98■□□□□ 0.31
LRRFIP1-204ENST00000392000 CPLX1O14810 134 aa16.98■□□□□ 0.31
LRRFIP1-204ENST00000392000 PAXBP1Q9Y5B6 917 aa16.98■□□□□ 0.31
LRRFIP1-204ENST00000392000 STOX1Q6ZVD7 989 aa16.98■□□□□ 0.31
LRRFIP1-204ENST00000392000 PLA2G4DQ86XP0 818 aa16.98■□□□□ 0.31
LRRFIP1-204ENST00000392000 CCDC82Q8N4S0 544 aa16.98■□□□□ 0.31
LRRFIP1-204ENST00000392000 DIP2BQ9P265 1576 aa16.98■□□□□ 0.31
LRRFIP1-204ENST00000392000 HIP1O00291 1037 aa16.97■□□□□ 0.31
LRRFIP1-204ENST00000392000 AMOTQ4VCS5 1084 aa16.97■□□□□ 0.31
LRRFIP1-204ENST00000392000 UTP14CQ5TAP6 766 aaKnown RBP16.97■□□□□ 0.31
LRRFIP1-204ENST00000392000 TDRD7Q8NHU6 1098 aaKnown RBP16.97■□□□□ 0.31
LRRFIP1-204ENST00000392000 AGLP35573 1532 aa16.97■□□□□ 0.31
LRRFIP1-204ENST00000392000 MTX1Q13505 466 aa16.97■□□□□ 0.31
LRRFIP1-204ENST00000392000 DPCR1Q3MIW9 517 aa16.97■□□□□ 0.31
LRRFIP1-204ENST00000392000 KRT222Q8N1A0 295 aa16.97■□□□□ 0.31
LRRFIP1-204ENST00000392000 KCNH5Q8NCM2 988 aa16.97■□□□□ 0.31
LRRFIP1-204ENST00000392000 BABAM1Q9NWV8 329 aa16.97■□□□□ 0.31
LRRFIP1-204ENST00000392000 SFPQP23246 707 aaKnown RBP eCLIP16.97■□□□□ 0.31
LRRFIP1-204ENST00000392000 MNS1Q8NEH6 495 aa16.97■□□□□ 0.31
LRRFIP1-204ENST00000392000 XPO4Q9C0E2 1151 aaKnown RBP16.97■□□□□ 0.31
LRRFIP1-204ENST00000392000 COL15A1P39059 1388 aa16.97■□□□□ 0.31
LRRFIP1-204ENST00000392000 CTIFO43310 598 aaKnown RBP16.96■□□□□ 0.31
LRRFIP1-204ENST00000392000 PTPN12Q05209 780 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms