RNA–Protein interactions for RNA: ENST00000391200.1

SNORA40.18-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.18-201ENST00000391200 GRIN3BO60391 1043 aa2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 AMPD1P23109 780 aa2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 RRS1Q15050 365 aaKnown RBP2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 Q3C1V9 767 aa2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 C4orf48Q5BLP8 95 aa2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 TRIM22Q8IYM9 498 aa2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 KCNH5Q8NCM2 988 aa2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 PCMTD2Q9NV79 361 aa2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 CCNL1Q9UK58 526 aaPredicted RBP2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 BCS1LQ9Y276 419 aa2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 BTAF1O14981 1849 aa2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 MAP2P11137 1827 aaKnown RBP2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 LRP5O75197 1615 aa2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 PPIP5K1Q6PFW1 1433 aa2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 WDR17Q8IZU2 1322 aa2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 CENPJQ9HC77 1338 aaPredicted RBP2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 N4BP2Q86UW6 1770 aaPredicted RBP2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 MYOM1P52179 1685 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 CDC42BPGQ6DT37 1551 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 PCNTO95613 3336 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 SLC24A1O60721 1099 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 ADAMTS4O75173 837 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 RHOQP17081 205 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 COL13A1Q5TAT6 717 aaPredicted RBP2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 FOXD4L5Q5VV16 416 aaPredicted RBP2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 NBPF6Q5VWK0 638 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 HDGFL2Q7Z4V5 671 aaPredicted RBP2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 C16orf71Q8IYS4 520 aaPredicted RBP2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 IP6K1Q92551 441 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 NBPF4Q96M43 638 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 CDCA7Q9BWT1 371 aaPredicted RBP2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 GGNBP2Q9H3C7 697 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 ASAP1Q9ULH1 1129 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 RNF112Q9ULX5 631 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 POLR2AP24928 1970 aaKnown RBP2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 LTN1O94822 1766 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 COL18A1P39060 1754 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 PIK3C2GO75747 1445 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 USP6P35125 1406 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 CRB1P82279 1406 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 PNPLA7Q6ZV29 1317 aa2.66□□□□□ -1.98
SNORA40.18-201ENST00000391200 ITGB4P16144 1822 aa2.65□□□□□ -1.98
SNORA40.18-201ENST00000391200 ITSN1Q15811 1721 aa2.65□□□□□ -1.98
SNORA40.18-201ENST00000391200 KNDC1Q76NI1 1749 aa2.65□□□□□ -1.98
SNORA40.18-201ENST00000391200 AATKQ6ZMQ8 1374 aa2.65□□□□□ -1.98
SNORA40.18-201ENST00000391200 FCHSD2O94868 740 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 MED26O95402 600 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 H2AFB1P0C5Y9 115 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 H2AFB2P0C5Z0 115 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 HSPA6P17066 643 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 TATP17735 454 aaPredicted RBP2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 SSTR4P31391 388 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 GUCA2AQ02747 115 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 HSP90AB2PQ58FF8 381 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 TRAPPC3LQ5T215 181 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 Q6ZVU0 165 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 AMIGO3Q86WK7 504 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 DNAJC5GQ8N7S2 189 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 FAM174AQ8TBP5 190 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 RAPGEF4Q8WZA2 1011 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 PIGBQ92521 554 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 COG3Q96JB2 828 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 PLVAPQ9BX97 442 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 CARD11Q9BXL7 1154 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 ZNF395Q9H8N7 513 aaPredicted RBP2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 NMRK2Q9NPI5 230 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 TERF2IPQ9NYB0 399 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 NOP53Q9NZM5 478 aaKnown RBP2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 RREB1Q92766 1687 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 NRKQ7Z2Y5 1582 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 SBF1O95248 1867 aa2.65□□□□□ -1.99
SNORA40.18-201ENST00000391200 PHRF1Q9P1Y6 1649 aaKnown RBP2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 EIF3AQ14152 1382 aaKnown RBP2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 PARD3Q8TEW0 1356 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 NINLQ9Y2I6 1382 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 THSD7AQ9UPZ6 1657 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 TUBGCP6Q96RT7 1819 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 ST20-MTHFSA0A0A6YYL1 179 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 C2CD2LO14523 706 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 FYB1O15117 783 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 PTCD1O75127 700 aaKnown RBP2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 THBS1P07996 1170 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 MMP10P09238 476 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 DPEP1P16444 411 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 HOXC9P31274 260 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 RFC4P35249 363 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 TMF1P82094 1093 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 RELBQ01201 579 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 SLC27A3Q5K4L6 730 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 BICDL1Q6ZP65 573 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 RIPOR1Q6ZS17 1223 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 ARHGEF1Q92888 912 aaKnown RBP2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 AK7Q96M32 723 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 PCGF6Q9BYE7 350 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 POLMQ9NP87 494 aaPredicted RBP2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 DAXXQ9UER7 740 aaPredicted RBP2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 CD2APQ9Y5K6 639 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 OVOS2A0A0G2JMS6 1433 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 OVOS2A0A0J9YW53 1432 aa2.64□□□□□ -1.99
SNORA40.18-201ENST00000391200 OVOS2Q6IE36 1432 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms