RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 PMEPA1Q969W9 287 aa5.55□□□□□ -1.52
RNU6-550P-201ENST00000391057 SPACA7Q96KW9 195 aa5.55□□□□□ -1.52
RNU6-550P-201ENST00000391057 CNTN3Q9P232 1028 aa5.55□□□□□ -1.52
RNU6-550P-201ENST00000391057 KANSL3Q9P2N6 904 aa5.55□□□□□ -1.52
RNU6-550P-201ENST00000391057 FOXD3Q9UJU5 478 aaPredicted RBP5.55□□□□□ -1.52
RNU6-550P-201ENST00000391057 NAGPAQ9UK23 515 aa5.55□□□□□ -1.52
RNU6-550P-201ENST00000391057 LOC102724428A0A0B4J2F2 783 aa5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 M0R082 166 aa5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 ALBP02768 609 aa5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 DGKGP49619 791 aa5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 SIK1P57059 783 aa5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 PERM1Q5SV97 790 aa5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 COL13A1Q5TAT6 717 aaPredicted RBP5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 PSAPL1Q6NUJ1 521 aa5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 NCAPG2Q86XI2 1143 aa5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 MICALL1Q8N3F8 863 aa5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 ZNF417Q8TAU3 575 aa5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 ZNF587Q96SQ5 575 aaPredicted RBP5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 NIF3L1Q9GZT8 377 aa5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 CHRDQ9H2X0 955 aa5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 JPH1Q9HDC5 661 aaPredicted RBP5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 FRRS1LQ9P0K9 344 aa5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 STARD13Q9Y3M8 1113 aa5.54□□□□□ -1.52
RNU6-550P-201ENST00000391057 J3QW42 95 aa5.53□□□□□ -1.52
RNU6-550P-201ENST00000391057 PIK3R2O00459 728 aa5.53□□□□□ -1.52
RNU6-550P-201ENST00000391057 LILRB5O75023 590 aa5.53□□□□□ -1.52
RNU6-550P-201ENST00000391057 RGS9O75916 674 aaPredicted RBP5.53□□□□□ -1.52
RNU6-550P-201ENST00000391057 KIF4AO95239 1232 aa5.53□□□□□ -1.52
RNU6-550P-201ENST00000391057 NUDT8Q8WV74 236 aa5.53□□□□□ -1.52
RNU6-550P-201ENST00000391057 ALKBH8Q96BT7 664 aaKnown RBP5.53□□□□□ -1.52
RNU6-550P-201ENST00000391057 SCARF2Q96GP6 870 aaPredicted RBP5.53□□□□□ -1.52
RNU6-550P-201ENST00000391057 ASB16Q96NS5 453 aa5.53□□□□□ -1.52
RNU6-550P-201ENST00000391057 LPIN3Q9BQK8 851 aa5.53□□□□□ -1.52
RNU6-550P-201ENST00000391057 SMG9Q9H0W8 520 aaKnown RBP5.53□□□□□ -1.52
RNU6-550P-201ENST00000391057 ZFYVE28Q9HCC9 887 aa5.53□□□□□ -1.52
RNU6-550P-201ENST00000391057 MKL2Q9ULH7 1088 aa5.53□□□□□ -1.52
RNU6-550P-201ENST00000391057 AMOTL2Q9Y2J4 779 aa5.53□□□□□ -1.52
RNU6-550P-201ENST00000391057 EREGO14944 169 aa5.52□□□□□ -1.53
RNU6-550P-201ENST00000391057 CPNE3O75131 537 aaKnown RBP5.52□□□□□ -1.53
RNU6-550P-201ENST00000391057 IGHA2P01877 340 aa5.52□□□□□ -1.53
RNU6-550P-201ENST00000391057 SNRPNP63162 240 aaKnown RBP5.52□□□□□ -1.53
RNU6-550P-201ENST00000391057 CCDC27Q2M243 656 aa5.52□□□□□ -1.53
RNU6-550P-201ENST00000391057 C20orf204Q6ZNR8 217 aa5.52□□□□□ -1.53
RNU6-550P-201ENST00000391057 BEND7Q8N7W2 519 aaPredicted RBP5.52□□□□□ -1.53
RNU6-550P-201ENST00000391057 PLD4Q96BZ4 506 aa5.52□□□□□ -1.53
RNU6-550P-201ENST00000391057 PRDM6Q9NQX0 595 aa5.52□□□□□ -1.53
RNU6-550P-201ENST00000391057 SALL4Q9UJQ4 1053 aa5.52□□□□□ -1.53
RNU6-550P-201ENST00000391057 CNTNAP5Q8WYK1 1306 aa5.51□□□□□ -1.53
RNU6-550P-201ENST00000391057 RNF225M0QZC1 329 aaPredicted RBP5.51□□□□□ -1.53
RNU6-550P-201ENST00000391057 GNB5O14775 395 aa5.51□□□□□ -1.53
RNU6-550P-201ENST00000391057 TREHO43280 583 aa5.51□□□□□ -1.53
RNU6-550P-201ENST00000391057 EDN3P14138 238 aa5.51□□□□□ -1.53
RNU6-550P-201ENST00000391057 HOXB4P17483 251 aaPredicted RBP5.51□□□□□ -1.53
RNU6-550P-201ENST00000391057 ATP11AP98196 1134 aa5.51□□□□□ -1.53
RNU6-550P-201ENST00000391057 ORC1Q13415 861 aa5.51□□□□□ -1.53
RNU6-550P-201ENST00000391057 C8orf86Q6ZUL3 223 aa5.51□□□□□ -1.53
RNU6-550P-201ENST00000391057 TTC9Q92623 222 aa5.51□□□□□ -1.53
RNU6-550P-201ENST00000391057 EIF1AYO14602 144 aaKnown RBP5.5□□□□□ -1.53
RNU6-550P-201ENST00000391057 SMNDC1O75940 238 aaKnown RBP eCLIP5.5□□□□□ -1.53
RNU6-550P-201ENST00000391057 POLR3DP05423 398 aaPredicted RBP5.5□□□□□ -1.53
RNU6-550P-201ENST00000391057 PLCB3Q01970 1234 aa5.5□□□□□ -1.53
RNU6-550P-201ENST00000391057 CEP135Q66GS9 1140 aa5.5□□□□□ -1.53
RNU6-550P-201ENST00000391057 CEP120Q8N960 986 aa5.5□□□□□ -1.53
RNU6-550P-201ENST00000391057 CSRNP1Q96S65 589 aa5.5□□□□□ -1.53
RNU6-550P-201ENST00000391057 DNAJC25Q9H1X3 360 aa5.5□□□□□ -1.53
RNU6-550P-201ENST00000391057 RASSF4Q9H2L5 321 aa5.5□□□□□ -1.53
RNU6-550P-201ENST00000391057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.5□□□□□ -1.53
RNU6-550P-201ENST00000391057 ACPPP15309 386 aa5.49□□□□□ -1.53
RNU6-550P-201ENST00000391057 MAPK8P45983 427 aa5.49□□□□□ -1.53
RNU6-550P-201ENST00000391057 AFF1P51825 1210 aaKnown RBP5.49□□□□□ -1.53
RNU6-550P-201ENST00000391057 FMR1Q06787 632 aaKnown RBP eCLIP5.49□□□□□ -1.53
RNU6-550P-201ENST00000391057 TRIM26Q12899 539 aaPredicted RBP5.49□□□□□ -1.53
RNU6-550P-201ENST00000391057 DSC3Q14574 896 aa5.49□□□□□ -1.53
RNU6-550P-201ENST00000391057 TMCO4Q5TGY1 634 aa5.49□□□□□ -1.53
RNU6-550P-201ENST00000391057 USPL1Q5W0Q7 1092 aa5.49□□□□□ -1.53
RNU6-550P-201ENST00000391057 LINC00114Q6XXX2 140 aa5.49□□□□□ -1.53
RNU6-550P-201ENST00000391057 GALNT12Q8IXK2 581 aa5.49□□□□□ -1.53
RNU6-550P-201ENST00000391057 PBX4Q9BYU1 374 aa5.49□□□□□ -1.53
RNU6-550P-201ENST00000391057 NOP53Q9NZM5 478 aaKnown RBP5.49□□□□□ -1.53
RNU6-550P-201ENST00000391057 PNMA6FA0A0J9YX94 578 aa5.48□□□□□ -1.53
RNU6-550P-201ENST00000391057 ANKRD33BA6NCL7 494 aa5.48□□□□□ -1.53
RNU6-550P-201ENST00000391057 SPDYE3A6NKU9 549 aa5.48□□□□□ -1.53
RNU6-550P-201ENST00000391057 NID1P14543 1247 aa5.48□□□□□ -1.53
RNU6-550P-201ENST00000391057 GRIK5Q16478 980 aa5.48□□□□□ -1.53
RNU6-550P-201ENST00000391057 GDF6Q6KF10 455 aaPredicted RBP5.48□□□□□ -1.53
RNU6-550P-201ENST00000391057 WFDC8Q8IUA0 241 aa5.48□□□□□ -1.53
RNU6-550P-201ENST00000391057 CACTIN-AS1Q8N1I8 211 aa5.48□□□□□ -1.53
RNU6-550P-201ENST00000391057 CCDC74AQ96AQ1 378 aa5.48□□□□□ -1.53
RNU6-550P-201ENST00000391057 TRIM11Q96F44 468 aa5.48□□□□□ -1.53
RNU6-550P-201ENST00000391057 OSMRQ99650 979 aa5.48□□□□□ -1.53
RNU6-550P-201ENST00000391057 NPHS2Q9NP85 383 aa5.48□□□□□ -1.53
RNU6-550P-201ENST00000391057 LATS2Q9NRM7 1088 aa5.48□□□□□ -1.53
RNU6-550P-201ENST00000391057 TRIM33Q9UPN9 1127 aa5.48□□□□□ -1.53
RNU6-550P-201ENST00000391057 FAM177BA6PVY3 158 aa5.47□□□□□ -1.53
RNU6-550P-201ENST00000391057 PDE2AO00408 941 aaPredicted RBP5.47□□□□□ -1.53
RNU6-550P-201ENST00000391057 PTPRAP18433 802 aa5.47□□□□□ -1.53
RNU6-550P-201ENST00000391057 IRS1P35568 1242 aa5.47□□□□□ -1.53
RNU6-550P-201ENST00000391057 ATP2B2Q01814 1243 aa5.47□□□□□ -1.53
RNU6-550P-201ENST00000391057 COL9A3Q14050 684 aaPredicted RBP5.47□□□□□ -1.53
RNU6-550P-201ENST00000391057 ENOX2Q16206 610 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms