RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 HOXD8P13378 290 aaPredicted RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 AFF3P51826 1226 aaKnown RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 DPTQ07507 201 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 ABHD18Q0P651 414 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 SEMA3FQ13275 785 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 CLN3Q13286 438 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 PKD2Q13563 968 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 EML3Q32P44 896 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 FAM161AQ3B820 660 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 KRTAP15-1Q3LI76 137 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 UBXN11Q5T124 520 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 ZFYVE27Q5T4F4 411 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 LCE1FQ5T754 118 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 ANGEL2Q5VTE6 544 aaKnown RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 PEAR1Q5VY43 1037 aaPredicted RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 SLC23A3Q6PIS1 610 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 LARP1Q6PKG0 1096 aaKnown RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 CRELD2Q6UXH1 353 aaPredicted RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 PPP1R3FQ6ZSY5 799 aaPredicted RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 TBC1D9Q6ZT07 1266 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 ILDR2Q71H61 639 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 SH3BP5LQ7L8J4 393 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 ZC3HAV1Q7Z2W4 902 aaKnown RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 SPRED2Q7Z698 418 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 SPRED1Q7Z699 444 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 WFDC3Q8IUB2 231 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 AGGF1Q8N302 714 aaeCLIP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 AMER2Q8N7J2 671 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 C9orf106Q8NAJ2 232 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 ARMC2Q8NEN0 867 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 C1orf216Q8TAB5 229 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 NETO1Q8TDF5 533 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 PXYLP1Q8TE99 480 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 NUDT8Q8WV74 236 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 KCNN1Q92952 543 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 DVL3Q92997 716 aaPredicted RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 KISS1RQ969F8 398 aaPredicted RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 KIRREL1Q96J84 757 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 C8orf49Q96NF6 230 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 SAMD11Q96NU1 681 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 UBL7Q96S82 380 aaPredicted RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 RUSC1Q9BVN2 902 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 IKZF4Q9H2S9 585 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 LRRC4CQ9HCJ2 640 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 LUC7LQ9NQ29 371 aaKnown RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 DNAAF2Q9NVR5 837 aaKnown RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 MARK1Q9P0L2 795 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 ZBTB4Q9P1Z0 1013 aaPredicted RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 DAXXQ9UER7 740 aaPredicted RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 ZC3H7BQ9UGR2 993 aaKnown RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 CNOT6Q9ULM6 557 aaKnown RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 SLC6A14Q9UN76 642 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 CTNND2Q9UQB3 1225 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 KCTD3Q9Y597 815 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 LTBP3Q9NS15 1303 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 A0A087X1B8 175 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 C6orf229H3BNL8 230 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 EFSO43281 561 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 HOXA2O43364 376 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 PRICKLE3O43900 615 aaPredicted RBP0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 GAS2O43903 313 aaKnown RBP0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 SUSD5O60279 629 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 CILPO75339 1184 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 CAPNS1P04632 268 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 CD8BP10966 210 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 MAP4P27816 1152 aaKnown RBP0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 ADD1P35611 737 aaKnown RBP0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 WASP42768 502 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 PHKA2P46019 1235 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 CEBPAP49715 358 aaPredicted RBP0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 DLG4P78352 724 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 CYP27A1Q02318 531 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 TBC1D8BQ0IIM8 1120 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 KRTAP21-2Q3LI59 83 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 KRT71Q3SY84 523 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 KLHL22Q53GT1 634 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 SAMD5Q5TGI4 173 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 FYB2Q5VWT5 728 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 DUSP27Q5VZP5 1158 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 ANKRD34AQ69YU3 496 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 DESI1Q6ICB0 168 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 PSAPL1Q6NUJ1 521 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 TMEM214Q6NUQ4 689 aaKnown RBP0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 PAOXQ6QHF9 649 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 ACAD11Q709F0 780 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 CYP2U1Q7Z449 544 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 ZAR1Q86SH2 424 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 METTL3Q86U44 580 aaKnown RBP0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 SYT8Q8NBV8 401 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 SYMPKQ92797 1274 aaKnown RBP0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 FUBP1Q96AE4 644 aaKnown RBP0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 LOXL4Q96JB6 756 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 CDK5RAP1Q96SZ6 601 aaKnown RBP0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 CARD14Q9BXL6 1004 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 ZNF341Q9BYN7 854 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 UBE2OQ9C0C9 1292 aaKnown RBP0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 ADARB2Q9NS39 739 aaKnown RBP0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 USP40Q9NVE5 1235 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 FRRS1LQ9P0K9 344 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 ZBTB32Q9Y2Y4 487 aaPredicted RBP0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms