RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 COPS6Q7L5N1 327 aa12.79□□□□□ -0.36
TRAV18-201ENST00000390446 ANKIB1Q9P2G1 1089 aa12.79□□□□□ -0.36
TRAV18-201ENST00000390446 POLLQ9UGP5 575 aa12.79□□□□□ -0.36
TRAV18-201ENST00000390446 TSPYL4Q9UJ04 414 aa12.79□□□□□ -0.36
TRAV18-201ENST00000390446 XAGE3Q8WTP9 111 aa12.78□□□□□ -0.36
TRAV18-201ENST00000390446 SCAF8Q9UPN6 1271 aaKnown RBP12.78□□□□□ -0.36
TRAV18-201ENST00000390446 VIL1P09327 827 aaKnown RBP12.77□□□□□ -0.37
TRAV18-201ENST00000390446 RTL5Q5HYW3 569 aaPredicted RBP12.77□□□□□ -0.37
TRAV18-201ENST00000390446 PRAMEF18Q5VWM3 479 aa12.77□□□□□ -0.37
TRAV18-201ENST00000390446 INTS3Q68E01 1043 aaKnown RBP12.77□□□□□ -0.37
TRAV18-201ENST00000390446 CELF1Q92879 486 aaKnown RBP12.77□□□□□ -0.37
TRAV18-201ENST00000390446 TRIM17Q9Y577 477 aa12.77□□□□□ -0.37
TRAV18-201ENST00000390446 MAPK8IP3Q9UPT6 1336 aa12.77□□□□□ -0.37
TRAV18-201ENST00000390446 POLR2AP24928 1970 aaKnown RBP12.76□□□□□ -0.37
TRAV18-201ENST00000390446 UFL1O94874 794 aa12.76□□□□□ -0.37
TRAV18-201ENST00000390446 USP17L8P0C7I0 530 aa12.76□□□□□ -0.37
TRAV18-201ENST00000390446 PPP2R1AP30153 589 aa12.76□□□□□ -0.37
TRAV18-201ENST00000390446 TM4SF4P48230 202 aa12.76□□□□□ -0.37
TRAV18-201ENST00000390446 PRKG1Q13976 671 aa12.76□□□□□ -0.37
TRAV18-201ENST00000390446 AGBL3Q8NEM8 1001 aa12.76□□□□□ -0.37
TRAV18-201ENST00000390446 TBC1D16Q8TBP0 767 aa12.76□□□□□ -0.37
TRAV18-201ENST00000390446 CCER1Q8TC90 406 aaPredicted RBP12.76□□□□□ -0.37
TRAV18-201ENST00000390446 FBXW7Q969H0 707 aa12.76□□□□□ -0.37
TRAV18-201ENST00000390446 FAM89AQ96GI7 184 aa12.76□□□□□ -0.37
TRAV18-201ENST00000390446 MYOZ2Q9NPC6 264 aa12.76□□□□□ -0.37
TRAV18-201ENST00000390446 RTL9Q8NET4 1388 aa12.76□□□□□ -0.37
TRAV18-201ENST00000390446 TNRC18O15417 2968 aaPredicted RBP12.76□□□□□ -0.37
TRAV18-201ENST00000390446 RPS8P62241 208 aaKnown RBP12.75□□□□□ -0.37
TRAV18-201ENST00000390446 PROSER3Q2NL68 480 aa12.75□□□□□ -0.37
TRAV18-201ENST00000390446 RSBN1LQ6PCB5 846 aaPredicted RBP12.75□□□□□ -0.37
TRAV18-201ENST00000390446 ARMC9Q7Z3E5 817 aa12.75□□□□□ -0.37
TRAV18-201ENST00000390446 PNNQ9H307 717 aaKnown RBP12.75□□□□□ -0.37
TRAV18-201ENST00000390446 GGA1Q9UJY5 639 aa12.75□□□□□ -0.37
TRAV18-201ENST00000390446 ALDH1A1P00352 501 aa12.74□□□□□ -0.37
TRAV18-201ENST00000390446 PDIA6Q15084 440 aa12.74□□□□□ -0.37
TRAV18-201ENST00000390446 NFE2L2Q16236 605 aa12.74□□□□□ -0.37
TRAV18-201ENST00000390446 NOM1Q5C9Z4 860 aaKnown RBP12.74□□□□□ -0.37
TRAV18-201ENST00000390446 OGFOD1Q8N543 542 aa12.74□□□□□ -0.37
TRAV18-201ENST00000390446 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
TRAV18-201ENST00000390446 POTEFA5A3E0 1075 aa12.73□□□□□ -0.37
TRAV18-201ENST00000390446 ATP5J2-PTCD1G3V325 749 aa12.73□□□□□ -0.37
TRAV18-201ENST00000390446 ZNF280AP59817 542 aaPredicted RBP12.73□□□□□ -0.37
TRAV18-201ENST00000390446 PITPNM2Q9BZ72 1349 aa12.72□□□□□ -0.37
TRAV18-201ENST00000390446 USP17L3A6NCW0 530 aa12.72□□□□□ -0.37
TRAV18-201ENST00000390446 USP17L4A6NCW7 530 aa12.72□□□□□ -0.37
TRAV18-201ENST00000390446 SF3B3Q15393 1217 aaKnown RBP12.72□□□□□ -0.37
TRAV18-201ENST00000390446 USP17L1Q7RTZ2 530 aa12.72□□□□□ -0.37
TRAV18-201ENST00000390446 SLC10A4Q96EP9 437 aa12.72□□□□□ -0.37
TRAV18-201ENST00000390446 ANKRD36CQ5JPF3 1778 aa12.71□□□□□ -0.37
TRAV18-201ENST00000390446 PAPPA2Q9BXP8 1791 aa12.71□□□□□ -0.37
TRAV18-201ENST00000390446 IRS4O14654 1257 aaPredicted RBP12.71□□□□□ -0.37
TRAV18-201ENST00000390446 HSP90B1P14625 803 aaKnown RBP12.71□□□□□ -0.37
TRAV18-201ENST00000390446 FXR1P51114 621 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRAV18-201ENST00000390446 PTPN12Q05209 780 aaKnown RBP12.71□□□□□ -0.37
TRAV18-201ENST00000390446 NBPF9Q3BBW0 867 aa12.71□□□□□ -0.37
TRAV18-201ENST00000390446 ANKRD13DQ6ZTN6 518 aa12.71□□□□□ -0.37
TRAV18-201ENST00000390446 R3HDMLQ9H3Y0 253 aa12.71□□□□□ -0.37
TRAV18-201ENST00000390446 LAS1LQ9Y4W2 734 aaKnown RBP12.71□□□□□ -0.37
TRAV18-201ENST00000390446 DUOX1Q9NRD9 1551 aa12.71□□□□□ -0.37
TRAV18-201ENST00000390446 TAF1P21675 1872 aa12.71□□□□□ -0.37
TRAV18-201ENST00000390446 LAMB2P55268 1798 aa12.71□□□□□ -0.38
TRAV18-201ENST00000390446 EN2P19622 333 aaPredicted RBP12.7□□□□□ -0.38
TRAV18-201ENST00000390446 INHBEP58166 350 aa12.7□□□□□ -0.38
TRAV18-201ENST00000390446 OTUD7BQ6GQQ9 843 aa12.7□□□□□ -0.38
TRAV18-201ENST00000390446 OTOP1Q7RTM1 612 aa12.7□□□□□ -0.38
TRAV18-201ENST00000390446 LRP10Q7Z4F1 713 aa12.7□□□□□ -0.38
TRAV18-201ENST00000390446 PLBD2Q8NHP8 589 aa12.7□□□□□ -0.38
TRAV18-201ENST00000390446 ERO1AQ96HE7 468 aa12.7□□□□□ -0.38
TRAV18-201ENST00000390446 ANGEL1Q9UNK9 670 aaKnown RBP12.7□□□□□ -0.38
TRAV18-201ENST00000390446 COLQQ9Y215 455 aaPredicted RBP12.7□□□□□ -0.38
TRAV18-201ENST00000390446 KDM3BQ7LBC6 1761 aa12.7□□□□□ -0.38
TRAV18-201ENST00000390446 MANSC4A6NHS7 340 aaPredicted RBP12.69□□□□□ -0.38
TRAV18-201ENST00000390446 RIPK4P57078 832 aa12.69□□□□□ -0.38
TRAV18-201ENST00000390446 SLC4A8Q2Y0W8 1093 aa12.69□□□□□ -0.38
TRAV18-201ENST00000390446 PODNQ7Z5L7 613 aa12.69□□□□□ -0.38
TRAV18-201ENST00000390446 CCDC85AQ96PX6 553 aaPredicted RBP12.69□□□□□ -0.38
TRAV18-201ENST00000390446 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
TRAV18-201ENST00000390446 SPRYD7Q5W111 196 aa12.68□□□□□ -0.38
TRAV18-201ENST00000390446 IFNL1Q8IU54 200 aa12.68□□□□□ -0.38
TRAV18-201ENST00000390446 EFCC1Q9HA90 598 aa12.68□□□□□ -0.38
TRAV18-201ENST00000390446 SEC31BQ9NQW1 1179 aa12.68□□□□□ -0.38
TRAV18-201ENST00000390446 CHPF2Q9P2E5 772 aa12.68□□□□□ -0.38
TRAV18-201ENST00000390446 PTPN22Q9Y2R2 807 aa12.68□□□□□ -0.38
TRAV18-201ENST00000390446 DDX60Q8IY21 1712 aaKnown RBP12.68□□□□□ -0.38
TRAV18-201ENST00000390446 SASH1O94885 1247 aa12.67□□□□□ -0.38
TRAV18-201ENST00000390446 ATP2B4P23634 1241 aa12.67□□□□□ -0.38
TRAV18-201ENST00000390446 CCDC152Q4G0S7 254 aa12.67□□□□□ -0.38
TRAV18-201ENST00000390446 RIC3Q7Z5B4 369 aa12.67□□□□□ -0.38
TRAV18-201ENST00000390446 NBPF11Q86T75 865 aa12.67□□□□□ -0.38
TRAV18-201ENST00000390446 ANKRD18AQ8IVF6 992 aa12.67□□□□□ -0.38
TRAV18-201ENST00000390446 CD99L2Q8TCZ2 262 aa12.67□□□□□ -0.38
TRAV18-201ENST00000390446 CFHR5Q9BXR6 569 aa12.67□□□□□ -0.38
TRAV18-201ENST00000390446 XDHP47989 1333 aa12.66□□□□□ -0.38
TRAV18-201ENST00000390446 DLL1O00548 723 aa12.66□□□□□ -0.38
TRAV18-201ENST00000390446 WNT10BO00744 389 aa12.66□□□□□ -0.38
TRAV18-201ENST00000390446 MYCP01106 439 aaPredicted RBP12.66□□□□□ -0.38
TRAV18-201ENST00000390446 LMOD3Q0VAK6 560 aa12.66□□□□□ -0.38
TRAV18-201ENST00000390446 ARHGEF6Q15052 776 aa12.66□□□□□ -0.38
TRAV18-201ENST00000390446 HDGFL1Q5TGJ6 251 aa12.66□□□□□ -0.38
TRAV18-201ENST00000390446 APOBEC3FQ8IUX4 373 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms