RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 PRR5LQ6MZQ0 368 aa11.09□□□□□ -0.63
TRAV17-201ENST00000390445 DZIP3Q86Y13 1208 aaKnown RBP11.09□□□□□ -0.63
TRAV17-201ENST00000390445 THUMPD2Q9BTF0 503 aaKnown RBP11.09□□□□□ -0.63
TRAV17-201ENST00000390445 FAM117AQ9C073 453 aa11.09□□□□□ -0.63
TRAV17-201ENST00000390445 SNRPA1P09661 255 aaKnown RBP11.08□□□□□ -0.64
TRAV17-201ENST00000390445 NBPF10Q6P3W6 841 aaKnown RBP11.08□□□□□ -0.64
TRAV17-201ENST00000390445 NBPF15Q8N660 670 aa11.08□□□□□ -0.64
TRAV17-201ENST00000390445 PLEKHF1Q96S99 279 aa11.08□□□□□ -0.64
TRAV17-201ENST00000390445 DDX11L8A8MPP1 907 aa11.07□□□□□ -0.64
TRAV17-201ENST00000390445 H0YIN7 160 aa11.07□□□□□ -0.64
TRAV17-201ENST00000390445 HTATSF1O43719 755 aaKnown RBP11.07□□□□□ -0.64
TRAV17-201ENST00000390445 HSPA6P17066 643 aa11.07□□□□□ -0.64
TRAV17-201ENST00000390445 TTLL6Q8N841 843 aa11.07□□□□□ -0.64
TRAV17-201ENST00000390445 ZNF622Q969S3 477 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRAV17-201ENST00000390445 TAF7Q15545 349 aaPredicted RBP11.06□□□□□ -0.64
TRAV17-201ENST00000390445 NPM2Q86SE8 214 aaKnown RBP11.06□□□□□ -0.64
TRAV17-201ENST00000390445 SETDB2Q96T68 719 aa11.06□□□□□ -0.64
TRAV17-201ENST00000390445 GOLGA8CPA6NN73 597 aa11.05□□□□□ -0.64
TRAV17-201ENST00000390445 NFKBIEO00221 500 aa11.05□□□□□ -0.64
TRAV17-201ENST00000390445 SLC10A3P09131 477 aa11.05□□□□□ -0.64
TRAV17-201ENST00000390445 DDX10Q13206 875 aaKnown RBP11.05□□□□□ -0.64
TRAV17-201ENST00000390445 NFE2L2Q16236 605 aa11.05□□□□□ -0.64
TRAV17-201ENST00000390445 CNBD1Q8NA66 436 aa11.05□□□□□ -0.64
TRAV17-201ENST00000390445 ANKK1Q8NFD2 765 aa11.05□□□□□ -0.64
TRAV17-201ENST00000390445 BRIP1Q9BX63 1249 aa11.05□□□□□ -0.64
TRAV17-201ENST00000390445 FAM177BA6PVY3 158 aa11.04□□□□□ -0.64
TRAV17-201ENST00000390445 NPHP1O15259 732 aa11.04□□□□□ -0.64
TRAV17-201ENST00000390445 C21orf2O43822 256 aa11.04□□□□□ -0.64
TRAV17-201ENST00000390445 TOMM70O94826 608 aa11.04□□□□□ -0.64
TRAV17-201ENST00000390445 NEFMP07197 916 aa11.04□□□□□ -0.64
TRAV17-201ENST00000390445 CD46P15529 392 aa11.04□□□□□ -0.64
TRAV17-201ENST00000390445 PDE6BP35913 854 aa11.04□□□□□ -0.64
TRAV17-201ENST00000390445 BCAMP50895 628 aa11.04□□□□□ -0.64
TRAV17-201ENST00000390445 HLFQ16534 295 aa11.04□□□□□ -0.64
TRAV17-201ENST00000390445 NGEFQ8N5V2 710 aa11.04□□□□□ -0.64
TRAV17-201ENST00000390445 WNT2BQ93097 391 aa11.04□□□□□ -0.64
TRAV17-201ENST00000390445 LRCH3Q96II8 777 aa11.04□□□□□ -0.64
TRAV17-201ENST00000390445 RRAGCQ9HB90 399 aa11.04□□□□□ -0.64
TRAV17-201ENST00000390445 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.04□□□□□ -0.64
TRAV17-201ENST00000390445 MAPK8IP3Q9UPT6 1336 aa11.04□□□□□ -0.64
TRAV17-201ENST00000390445 SCN4AP35499 1836 aa11.03□□□□□ -0.64
TRAV17-201ENST00000390445 RNF40O75150 1001 aa11.03□□□□□ -0.64
TRAV17-201ENST00000390445 LMNB1P20700 586 aa11.03□□□□□ -0.64
TRAV17-201ENST00000390445 EIF4A1P60842 406 aaKnown RBP11.03□□□□□ -0.64
TRAV17-201ENST00000390445 ST5P78524 1137 aa11.03□□□□□ -0.64
TRAV17-201ENST00000390445 NBPF5PQ86XG9 351 aaPredicted RBP11.03□□□□□ -0.64
TRAV17-201ENST00000390445 IL27Q8NEV9 243 aa11.03□□□□□ -0.64
TRAV17-201ENST00000390445 BEGAINQ9BUH8 593 aa11.03□□□□□ -0.64
TRAV17-201ENST00000390445 KDM2BQ8NHM5 1336 aa11.03□□□□□ -0.64
TRAV17-201ENST00000390445 SOWAHBA6NEL2 793 aa11.02□□□□□ -0.65
TRAV17-201ENST00000390445 SULF1Q8IWU6 871 aa11.02□□□□□ -0.65
TRAV17-201ENST00000390445 SLF2Q8IX21 1173 aa11.02□□□□□ -0.65
TRAV17-201ENST00000390445 RDH13Q8NBN7 331 aa11.02□□□□□ -0.65
TRAV17-201ENST00000390445 NIP7Q9Y221 180 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRAV17-201ENST00000390445 ZNF652Q9Y2D9 606 aa11.02□□□□□ -0.65
TRAV17-201ENST00000390445 RRP7AQ9Y3A4 280 aaKnown RBP11.02□□□□□ -0.65
TRAV17-201ENST00000390445 DDX60Q8IY21 1712 aaKnown RBP11.01□□□□□ -0.65
TRAV17-201ENST00000390445 SRGNP10124 158 aa11.01□□□□□ -0.65
TRAV17-201ENST00000390445 MYL6BP14649 208 aa11.01□□□□□ -0.65
TRAV17-201ENST00000390445 HTRA3P83110 453 aa11.01□□□□□ -0.65
TRAV17-201ENST00000390445 RALBP1Q15311 655 aa11.01□□□□□ -0.65
TRAV17-201ENST00000390445 PRPF40BQ6NWY9 871 aaKnown RBP11.01□□□□□ -0.65
TRAV17-201ENST00000390445 CLEC4GQ6UXB4 293 aa11.01□□□□□ -0.65
TRAV17-201ENST00000390445 TTLL7Q6ZT98 887 aa11.01□□□□□ -0.65
TRAV17-201ENST00000390445 CCDC146Q8IYE0 955 aa11.01□□□□□ -0.65
TRAV17-201ENST00000390445 ABCC12Q96J65 1359 aa11.01□□□□□ -0.65
TRAV17-201ENST00000390445 PCNTO95613 3336 aa11□□□□□ -0.65
TRAV17-201ENST00000390445 RIPK4P57078 832 aa11□□□□□ -0.65
TRAV17-201ENST00000390445 STYK1Q6J9G0 422 aa11□□□□□ -0.65
TRAV17-201ENST00000390445 OLFM4Q6UX06 510 aa11□□□□□ -0.65
TRAV17-201ENST00000390445 C16orf71Q8IYS4 520 aaPredicted RBP11□□□□□ -0.65
TRAV17-201ENST00000390445 PNISRQ8TF01 805 aaKnown RBP11□□□□□ -0.65
TRAV17-201ENST00000390445 CNKSR1Q969H4 720 aa11□□□□□ -0.65
TRAV17-201ENST00000390445 KCTD12Q96CX2 325 aaKnown RBP11□□□□□ -0.65
TRAV17-201ENST00000390445 MASTLQ96GX5 879 aa11□□□□□ -0.65
TRAV17-201ENST00000390445 PDZRN3Q9UPQ7 1066 aa11□□□□□ -0.65
TRAV17-201ENST00000390445 GLTPD2A6NH11 291 aa10.99□□□□□ -0.65
TRAV17-201ENST00000390445 ANXA1P04083 346 aa10.99□□□□□ -0.65
TRAV17-201ENST00000390445 TMPOP42166 694 aaKnown RBP10.99□□□□□ -0.65
TRAV17-201ENST00000390445 NUTM1Q86Y26 1132 aa10.99□□□□□ -0.65
TRAV17-201ENST00000390445 DDRGK1Q96HY6 314 aa10.99□□□□□ -0.65
TRAV17-201ENST00000390445 TAOK3Q9H2K8 898 aa10.99□□□□□ -0.65
TRAV17-201ENST00000390445 PNNQ9H307 717 aaKnown RBP10.99□□□□□ -0.65
TRAV17-201ENST00000390445 ZBTB3Q9H5J0 574 aa10.99□□□□□ -0.65
TRAV17-201ENST00000390445 TSPYL4Q9UJ04 414 aa10.99□□□□□ -0.65
TRAV17-201ENST00000390445 MAP3K15Q6ZN16 1313 aa10.99□□□□□ -0.65
TRAV17-201ENST00000390445 MYBBP1AQ9BQG0 1328 aaKnown RBP10.99□□□□□ -0.65
TRAV17-201ENST00000390445 ZC3H4Q9UPT8 1303 aaKnown RBP10.99□□□□□ -0.65
TRAV17-201ENST00000390445 POTECB2RU33 542 aa10.98□□□□□ -0.65
TRAV17-201ENST00000390445 GPTP24298 496 aa10.98□□□□□ -0.65
TRAV17-201ENST00000390445 APLP1P51693 650 aa10.98□□□□□ -0.65
TRAV17-201ENST00000390445 PROSER3Q2NL68 480 aa10.98□□□□□ -0.65
TRAV17-201ENST00000390445 ERFEQ4G0M1 354 aa10.98□□□□□ -0.65
TRAV17-201ENST00000390445 TPTE2Q6XPS3 522 aa10.98□□□□□ -0.65
TRAV17-201ENST00000390445 THSD4Q6ZMP0 1018 aa10.98□□□□□ -0.65
TRAV17-201ENST00000390445 HPS5Q9UPZ3 1129 aa10.98□□□□□ -0.65
TRAV17-201ENST00000390445 UBN2Q6ZU65 1347 aa10.98□□□□□ -0.65
TRAV17-201ENST00000390445 KLRG2A4D1S0 409 aaPredicted RBP10.97□□□□□ -0.65
TRAV17-201ENST00000390445 NPR1P16066 1061 aa10.97□□□□□ -0.65
TRAV17-201ENST00000390445 EIF2S2P20042 333 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms