RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 CTSWP56202 376 aa17.36■□□□□ 0.37
TRBV4-1-201ENST00000390357 FKBP5Q13451 457 aaPredicted RBP17.36■□□□□ 0.37
TRBV4-1-201ENST00000390357 FAM9BQ8IZU0 186 aa17.36■□□□□ 0.37
TRBV4-1-201ENST00000390357 LINS1Q8NG48 757 aa17.36■□□□□ 0.37
TRBV4-1-201ENST00000390357 DNAAF4Q8WXU2 420 aa17.36■□□□□ 0.37
TRBV4-1-201ENST00000390357 PLA2G12BQ9BX93 195 aa17.36■□□□□ 0.37
TRBV4-1-201ENST00000390357 BSDC1Q9NW68 430 aaPredicted RBP17.36■□□□□ 0.37
TRBV4-1-201ENST00000390357 SALL2Q9Y467 1007 aaPredicted RBP17.36■□□□□ 0.37
TRBV4-1-201ENST00000390357 RTL9Q8NET4 1388 aa17.36■□□□□ 0.37
TRBV4-1-201ENST00000390357 DUOX1Q9NRD9 1551 aa17.36■□□□□ 0.37
TRBV4-1-201ENST00000390357 TRPM7Q96QT4 1865 aa17.35■□□□□ 0.37
TRBV4-1-201ENST00000390357 ECE2O60344 883 aa17.35■□□□□ 0.37
TRBV4-1-201ENST00000390357 EXOSC9Q06265 439 aaKnown RBP17.35■□□□□ 0.37
TRBV4-1-201ENST00000390357 GCKRQ14397 625 aa17.35■□□□□ 0.37
TRBV4-1-201ENST00000390357 CDC37L1Q7L3B6 337 aa17.35■□□□□ 0.37
TRBV4-1-201ENST00000390357 G2E3Q7L622 706 aa17.35■□□□□ 0.37
TRBV4-1-201ENST00000390357 DBNDD1Q9H9R9 158 aa17.35■□□□□ 0.37
TRBV4-1-201ENST00000390357 XDHP47989 1333 aa17.35■□□□□ 0.37
TRBV4-1-201ENST00000390357 PSMD14O00487 310 aa17.34■□□□□ 0.37
TRBV4-1-201ENST00000390357 VIL1P09327 827 aaKnown RBP17.34■□□□□ 0.37
TRBV4-1-201ENST00000390357 CWF19L2Q2TBE0 894 aaKnown RBP17.34■□□□□ 0.37
TRBV4-1-201ENST00000390357 PODNQ7Z5L7 613 aa17.34■□□□□ 0.37
TRBV4-1-201ENST00000390357 JARID2Q92833 1246 aaPredicted RBP17.34■□□□□ 0.37
TRBV4-1-201ENST00000390357 ABT1Q9ULW3 272 aaKnown RBP17.34■□□□□ 0.37
TRBV4-1-201ENST00000390357 UFL1O94874 794 aa17.33■□□□□ 0.36
TRBV4-1-201ENST00000390357 ECE1P42892 770 aa17.33■□□□□ 0.36
TRBV4-1-201ENST00000390357 VEGFBP49765 207 aa17.33■□□□□ 0.36
TRBV4-1-201ENST00000390357 CSF1RP07333 972 aa17.32■□□□□ 0.36
TRBV4-1-201ENST00000390357 IGHMBP2P38935 993 aaKnown RBP17.32■□□□□ 0.36
TRBV4-1-201ENST00000390357 DOK7Q18PE1 504 aa17.32■□□□□ 0.36
TRBV4-1-201ENST00000390357 UBE3BQ7Z3V4 1068 aa17.32■□□□□ 0.36
TRBV4-1-201ENST00000390357 MICALL2Q8IY33 904 aa17.32■□□□□ 0.36
TRBV4-1-201ENST00000390357 MMP14P50281 582 aa17.31■□□□□ 0.36
TRBV4-1-201ENST00000390357 MAP2K1Q02750 393 aaPredicted RBP17.31■□□□□ 0.36
TRBV4-1-201ENST00000390357 CST9Q5W186 159 aa17.31■□□□□ 0.36
TRBV4-1-201ENST00000390357 AGBL3Q8NEM8 1001 aa17.31■□□□□ 0.36
TRBV4-1-201ENST00000390357 AIDAQ96BJ3 306 aa17.31■□□□□ 0.36
TRBV4-1-201ENST00000390357 HHIPL1Q96JK4 782 aa17.31■□□□□ 0.36
TRBV4-1-201ENST00000390357 CCDC85AQ96PX6 553 aaPredicted RBP17.31■□□□□ 0.36
TRBV4-1-201ENST00000390357 ANKRD2Q9GZV1 360 aa17.31■□□□□ 0.36
TRBV4-1-201ENST00000390357 GREM2Q9H772 168 aa17.31■□□□□ 0.36
TRBV4-1-201ENST00000390357 MINPP1Q9UNW1 487 aa17.31■□□□□ 0.36
TRBV4-1-201ENST00000390357 LEMD3Q9Y2U8 911 aa17.31■□□□□ 0.36
TRBV4-1-201ENST00000390357 ZBTB12Q9Y330 459 aaPredicted RBP17.31■□□□□ 0.36
TRBV4-1-201ENST00000390357 WDR33Q9C0J8 1336 aaKnown RBP17.3■□□□□ 0.36
TRBV4-1-201ENST00000390357 HIRAP54198 1017 aaPredicted RBP17.3■□□□□ 0.36
TRBV4-1-201ENST00000390357 MPHOSPH8Q99549 860 aa17.3■□□□□ 0.36
TRBV4-1-201ENST00000390357 TLL2Q9Y6L7 1015 aa17.3■□□□□ 0.36
TRBV4-1-201ENST00000390357 CASP7P55210 303 aa17.29■□□□□ 0.36
TRBV4-1-201ENST00000390357 COL13A1Q5TAT6 717 aaPredicted RBP17.29■□□□□ 0.36
TRBV4-1-201ENST00000390357 ITGA6P23229 1130 aa17.28■□□□□ 0.36
TRBV4-1-201ENST00000390357 MAP2K2P36507 400 aa17.28■□□□□ 0.36
TRBV4-1-201ENST00000390357 CCT4P50991 539 aaKnown RBP17.28■□□□□ 0.36
TRBV4-1-201ENST00000390357 RSBN1LQ6PCB5 846 aaPredicted RBP17.28■□□□□ 0.36
TRBV4-1-201ENST00000390357 DCPSQ96C86 337 aaKnown RBP17.28■□□□□ 0.36
TRBV4-1-201ENST00000390357 WBP1LQ9NX94 342 aa17.28■□□□□ 0.36
TRBV4-1-201ENST00000390357 COL4A1P02462 1669 aa17.28■□□□□ 0.36
TRBV4-1-201ENST00000390357 ZNF609O15014 1411 aa17.28■□□□□ 0.36
TRBV4-1-201ENST00000390357 MED23Q9ULK4 1368 aa17.28■□□□□ 0.36
TRBV4-1-201ENST00000390357 ANKRD18BA2A2Z9 1011 aa17.27■□□□□ 0.36
TRBV4-1-201ENST00000390357 USP17L3A6NCW0 530 aa17.27■□□□□ 0.36
TRBV4-1-201ENST00000390357 USP17L4A6NCW7 530 aa17.27■□□□□ 0.36
TRBV4-1-201ENST00000390357 CELF2O95319 508 aaKnown RBP17.27■□□□□ 0.36
TRBV4-1-201ENST00000390357 CTCFP49711 727 aaPredicted RBP17.27■□□□□ 0.36
TRBV4-1-201ENST00000390357 BEND3Q5T5X7 828 aa17.27■□□□□ 0.36
TRBV4-1-201ENST00000390357 USP17L1Q7RTZ2 530 aa17.27■□□□□ 0.36
TRBV4-1-201ENST00000390357 SAMD7Q7Z3H4 446 aa17.27■□□□□ 0.36
TRBV4-1-201ENST00000390357 TRPM4Q8TD43 1214 aa17.27■□□□□ 0.36
TRBV4-1-201ENST00000390357 COA1Q9GZY4 146 aa17.27■□□□□ 0.36
TRBV4-1-201ENST00000390357 SPINK5Q9NQ38 1064 aaPredicted RBP17.27■□□□□ 0.36
TRBV4-1-201ENST00000390357 PRDM10Q9NQV6 1147 aa17.27■□□□□ 0.36
TRBV4-1-201ENST00000390357 KCNQ5Q9NR82 932 aa17.27■□□□□ 0.36
TRBV4-1-201ENST00000390357 PSME4Q14997 1843 aa17.26■□□□□ 0.35
TRBV4-1-201ENST00000390357 POLR2AP24928 1970 aaKnown RBP17.26■□□□□ 0.35
TRBV4-1-201ENST00000390357 TRAF5O00463 557 aa17.26■□□□□ 0.35
TRBV4-1-201ENST00000390357 ALDH1L1O75891 902 aa17.26■□□□□ 0.35
TRBV4-1-201ENST00000390357 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
TRBV4-1-201ENST00000390357 GLIS2Q9BZE0 524 aaPredicted RBP17.26■□□□□ 0.35
TRBV4-1-201ENST00000390357 MYO3BQ8WXR4 1341 aa17.25■□□□□ 0.35
TRBV4-1-201ENST00000390357 ZNF521Q96K83 1311 aa17.25■□□□□ 0.35
TRBV4-1-201ENST00000390357 ZNF280AP59817 542 aaPredicted RBP17.25■□□□□ 0.35
TRBV4-1-201ENST00000390357 IFIT5Q13325 482 aaKnown RBP17.25■□□□□ 0.35
TRBV4-1-201ENST00000390357 TBC1D10BQ4KMP7 808 aaPredicted RBP17.25■□□□□ 0.35
TRBV4-1-201ENST00000390357 TNS4Q8IZW8 715 aa17.25■□□□□ 0.35
TRBV4-1-201ENST00000390357 CAPNS2Q96L46 248 aa17.25■□□□□ 0.35
TRBV4-1-201ENST00000390357 GPR101Q96P66 508 aaPredicted RBP17.25■□□□□ 0.35
TRBV4-1-201ENST00000390357 BEGAINQ9BUH8 593 aa17.25■□□□□ 0.35
TRBV4-1-201ENST00000390357 PCNTO95613 3336 aa17.25■□□□□ 0.35
TRBV4-1-201ENST00000390357 SCN9AQ15858 1988 aa17.24■□□□□ 0.35
TRBV4-1-201ENST00000390357 E9PSI1 815 aa17.24■□□□□ 0.35
TRBV4-1-201ENST00000390357 USP17L8P0C7I0 530 aa17.24■□□□□ 0.35
TRBV4-1-201ENST00000390357 FMR1Q06787 632 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRBV4-1-201ENST00000390357 KIF4BQ2VIQ3 1234 aa17.24■□□□□ 0.35
TRBV4-1-201ENST00000390357 RBM26Q5T8P6 1007 aaKnown RBP17.24■□□□□ 0.35
TRBV4-1-201ENST00000390357 STRIP1Q5VSL9 837 aa17.24■□□□□ 0.35
TRBV4-1-201ENST00000390357 KRT26Q7Z3Y9 468 aa17.24■□□□□ 0.35
TRBV4-1-201ENST00000390357 USP48Q86UV5 1035 aa17.24■□□□□ 0.35
TRBV4-1-201ENST00000390357 C9orf78Q9NZ63 289 aaPredicted RBP17.24■□□□□ 0.35
TRBV4-1-201ENST00000390357 ZNF804BA4D1E1 1349 aa17.23■□□□□ 0.35
TRBV4-1-201ENST00000390357 SHTN1A0MZ66 631 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms