RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 RHPN1Q8TCX5 695 aa17.03■□□□□ 0.32
LRRK1-201ENST00000388948 URB2Q14146 1524 aaKnown RBP17.03■□□□□ 0.32
LRRK1-201ENST00000388948 BIN1O00499 593 aa17.03■□□□□ 0.32
LRRK1-201ENST00000388948 KRT13P13646 458 aa17.03■□□□□ 0.32
LRRK1-201ENST00000388948 RRP36Q96EU6 259 aaKnown RBP17.03■□□□□ 0.32
LRRK1-201ENST00000388948 KIF5CO60282 957 aa17.03■□□□□ 0.32
LRRK1-201ENST00000388948 LRRC45Q96CN5 670 aa17.03■□□□□ 0.32
LRRK1-201ENST00000388948 SH2D4AQ9H788 454 aa17.03■□□□□ 0.32
LRRK1-201ENST00000388948 CCDC87Q9NVE4 849 aa17.03■□□□□ 0.32
LRRK1-201ENST00000388948 CIZ1Q9ULV3 898 aaPredicted RBP17.03■□□□□ 0.32
LRRK1-201ENST00000388948 SYCE3A1L190 88 aa17.02■□□□□ 0.32
LRRK1-201ENST00000388948 TFIP11Q9UBB9 837 aaKnown RBP17.02■□□□□ 0.32
LRRK1-201ENST00000388948 EIF4A2Q14240 407 aaKnown RBP17.02■□□□□ 0.32
LRRK1-201ENST00000388948 DHX37Q8IY37 1157 aaKnown RBP17.02■□□□□ 0.32
LRRK1-201ENST00000388948 TBC1D5Q92609 795 aa17.02■□□□□ 0.32
LRRK1-201ENST00000388948 GJB2P29033 226 aa17.02■□□□□ 0.31
LRRK1-201ENST00000388948 STAT6P42226 847 aa17.02■□□□□ 0.31
LRRK1-201ENST00000388948 TCIRG1Q13488 830 aa17.02■□□□□ 0.31
LRRK1-201ENST00000388948 ZMYM3Q14202 1370 aa17.02■□□□□ 0.31
LRRK1-201ENST00000388948 ZRANB1Q9UGI0 708 aa17.01■□□□□ 0.31
LRRK1-201ENST00000388948 ISM2Q6H9L7 571 aa17.01■□□□□ 0.31
LRRK1-201ENST00000388948 CTAGE5O15320 804 aa17.01■□□□□ 0.31
LRRK1-201ENST00000388948 KANK3Q6NY19 840 aa17.01■□□□□ 0.31
LRRK1-201ENST00000388948 DPP8Q6V1X1 898 aaPredicted RBP17.01■□□□□ 0.31
LRRK1-201ENST00000388948 CCDC102AQ96A19 550 aa17.01■□□□□ 0.31
LRRK1-201ENST00000388948 LRRC2Q9BYS8 371 aa17.01■□□□□ 0.31
LRRK1-201ENST00000388948 IFFO1Q0D2I5 559 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 BACH2Q9BYV9 841 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 ALDH1L1O75891 902 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 GNAT2P19087 354 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 PAFAH1B1P43034 410 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 TRIM47Q96LD4 638 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 FLT4P35916 1363 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 PLEKHH1Q9ULM0 1364 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 SBNO2Q9Y2G9 1366 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 KIF4AO95239 1232 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 STAMBPO95630 424 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 MCMDC2Q4G0Z9 681 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 TAOK3Q9H2K8 898 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 SAP30BPQ9UHR5 308 aaKnown RBP17■□□□□ 0.31
LRRK1-201ENST00000388948 TTC6Q86TZ1 520 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 CCDC117Q8IWD4 279 aaPredicted RBP17■□□□□ 0.31
LRRK1-201ENST00000388948 GGA1Q9UJY5 639 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 CCDC172P0C7W6 258 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 PAG1Q9NWQ8 432 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 BCS1LQ9Y276 419 aa17■□□□□ 0.31
LRRK1-201ENST00000388948 ZSCAN12O43309 604 aa16.99■□□□□ 0.31
LRRK1-201ENST00000388948 KIF4BQ2VIQ3 1234 aa16.99■□□□□ 0.31
LRRK1-201ENST00000388948 ALG1Q9BT22 464 aa16.99■□□□□ 0.31
LRRK1-201ENST00000388948 RBM25P49756 843 aaKnown RBP16.99■□□□□ 0.31
LRRK1-201ENST00000388948 TEX11Q8IYF3 940 aa16.99■□□□□ 0.31
LRRK1-201ENST00000388948 RGS22Q8NE09 1264 aa16.99■□□□□ 0.31
LRRK1-201ENST00000388948 NIM1KQ8IY84 436 aa16.99■□□□□ 0.31
LRRK1-201ENST00000388948 TSNARE1Q96NA8 513 aa16.99■□□□□ 0.31
LRRK1-201ENST00000388948 CFAP65Q6ZU64 1925 aaKnown RBP16.99■□□□□ 0.31
LRRK1-201ENST00000388948 AKNAD1Q5T1N1 836 aa16.98■□□□□ 0.31
LRRK1-201ENST00000388948 BRF1Q92994 677 aa16.98■□□□□ 0.31
LRRK1-201ENST00000388948 MTHFSDQ2M296 383 aaKnown RBP16.98■□□□□ 0.31
LRRK1-201ENST00000388948 DPY19L2Q6NUT2 758 aa16.98■□□□□ 0.31
LRRK1-201ENST00000388948 CRACR2AQ9BSW2 395 aa16.98■□□□□ 0.31
LRRK1-201ENST00000388948 ARL1P40616 181 aaPredicted RBP16.98■□□□□ 0.31
LRRK1-201ENST00000388948 MAP2K1Q02750 393 aaPredicted RBP16.98■□□□□ 0.31
LRRK1-201ENST00000388948 MEIS3Q99687 375 aa16.98■□□□□ 0.31
LRRK1-201ENST00000388948 CCDC183Q5T5S1 534 aa16.98■□□□□ 0.31
LRRK1-201ENST00000388948 CCDC102BQ68D86 513 aa16.98■□□□□ 0.31
LRRK1-201ENST00000388948 HOOK2Q96ED9 719 aa16.98■□□□□ 0.31
LRRK1-201ENST00000388948 ZYXQ15942 572 aaKnown RBP16.97■□□□□ 0.31
LRRK1-201ENST00000388948 MRVI1Q9Y6F6 885 aa16.97■□□□□ 0.31
LRRK1-201ENST00000388948 PRIM1P49642 420 aaKnown RBP16.97■□□□□ 0.31
LRRK1-201ENST00000388948 OTUD6BQ8N6M0 293 aa16.97■□□□□ 0.31
LRRK1-201ENST00000388948 ARHGEF10LQ9HCE6 1279 aa16.97■□□□□ 0.31
LRRK1-201ENST00000388948 PKD2L1Q9P0L9 805 aa16.97■□□□□ 0.31
LRRK1-201ENST00000388948 PA2G4Q9UQ80 394 aaKnown RBP16.97■□□□□ 0.31
LRRK1-201ENST00000388948 FAM13AO94988 1023 aa16.97■□□□□ 0.31
LRRK1-201ENST00000388948 CASQ1P31415 396 aa16.97■□□□□ 0.31
LRRK1-201ENST00000388948 AFMP43652 599 aa16.97■□□□□ 0.31
LRRK1-201ENST00000388948 ALS2CR12Q96Q35 445 aa16.97■□□□□ 0.31
LRRK1-201ENST00000388948 GIGYF2Q6Y7W6 1299 aaKnown RBP16.97■□□□□ 0.31
LRRK1-201ENST00000388948 RMND1Q9NWS8 449 aa16.97■□□□□ 0.31
LRRK1-201ENST00000388948 UBE4AQ14139 1066 aa16.97■□□□□ 0.31
LRRK1-201ENST00000388948 GINS2Q9Y248 185 aa16.97■□□□□ 0.31
LRRK1-201ENST00000388948 H7C1D1 291 aa16.96■□□□□ 0.31
LRRK1-201ENST00000388948 HCLS1P14317 486 aaPredicted RBP16.96■□□□□ 0.31
LRRK1-201ENST00000388948 PDE6BP35913 854 aa16.96■□□□□ 0.31
LRRK1-201ENST00000388948 CWF19L2Q2TBE0 894 aaKnown RBP16.96■□□□□ 0.31
LRRK1-201ENST00000388948 ZNF710Q8N1W2 664 aa16.96■□□□□ 0.31
LRRK1-201ENST00000388948 SUPT20HQ8NEM7 779 aa16.96■□□□□ 0.31
LRRK1-201ENST00000388948 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
LRRK1-201ENST00000388948 MSL1Q68DK7 614 aa16.96■□□□□ 0.31
LRRK1-201ENST00000388948 THOC2Q8NI27 1593 aaKnown RBP16.96■□□□□ 0.31
LRRK1-201ENST00000388948 APBB1IPQ7Z5R6 666 aaPredicted RBP16.96■□□□□ 0.31
LRRK1-201ENST00000388948 SPAG5Q96R06 1193 aa16.96■□□□□ 0.31
LRRK1-201ENST00000388948 DUOX2Q9NRD8 1548 aa16.96■□□□□ 0.31
LRRK1-201ENST00000388948 LINS1Q8NG48 757 aa16.96■□□□□ 0.31
LRRK1-201ENST00000388948 DENND2AQ9ULE3 1009 aa16.96■□□□□ 0.31
LRRK1-201ENST00000388948 FAM89AQ96GI7 184 aa16.96■□□□□ 0.3
LRRK1-201ENST00000388948 BMP15O95972 392 aa16.95■□□□□ 0.3
LRRK1-201ENST00000388948 CCDC24Q8N4L8 307 aa16.95■□□□□ 0.3
LRRK1-201ENST00000388948 SLAIN2Q9P270 581 aa16.95■□□□□ 0.3
LRRK1-201ENST00000388948 DISP3Q9P2K9 1392 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms