RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 SETDB1Q15047 1291 aa1.78□□□□□ -2.12
RNU6-540P-201ENST00000384622 NUTM2DQ5VT03 806 aaPredicted RBP1.78□□□□□ -2.12
RNU6-540P-201ENST00000384622 NUTM2AQ8IVF1 878 aaPredicted RBP1.78□□□□□ -2.12
RNU6-540P-201ENST00000384622 HOXD8P13378 290 aaPredicted RBP1.77□□□□□ -2.13
RNU6-540P-201ENST00000384622 PCSK7Q16549 785 aa1.77□□□□□ -2.13
RNU6-540P-201ENST00000384622 CSPP1Q1MSJ5 1256 aa1.77□□□□□ -2.13
RNU6-540P-201ENST00000384622 PERM1Q5SV97 790 aa1.77□□□□□ -2.13
RNU6-540P-201ENST00000384622 RNF20Q5VTR2 975 aa1.77□□□□□ -2.13
RNU6-540P-201ENST00000384622 DUSP27Q5VZP5 1158 aa1.77□□□□□ -2.13
RNU6-540P-201ENST00000384622 ZDHHC14Q8IZN3 488 aa1.77□□□□□ -2.13
RNU6-540P-201ENST00000384622 TTC9Q92623 222 aa1.77□□□□□ -2.13
RNU6-540P-201ENST00000384622 MISP3Q96FF7 219 aa1.77□□□□□ -2.13
RNU6-540P-201ENST00000384622 BDH2Q9BUT1 245 aa1.77□□□□□ -2.13
RNU6-540P-201ENST00000384622 SERINC4A6NH21 518 aa1.76□□□□□ -2.13
RNU6-540P-201ENST00000384622 ACVRL1P37023 503 aa1.76□□□□□ -2.13
RNU6-540P-201ENST00000384622 NFKBIBQ15653 356 aa1.76□□□□□ -2.13
RNU6-540P-201ENST00000384622 ZNF827Q17R98 1081 aa1.76□□□□□ -2.13
RNU6-540P-201ENST00000384622 SWI5Q1ZZU3 235 aa1.76□□□□□ -2.13
RNU6-540P-201ENST00000384622 TBC1D32Q96NH3 1257 aa1.76□□□□□ -2.13
RNU6-540P-201ENST00000384622 BRIP1Q9BX63 1249 aa1.76□□□□□ -2.13
RNU6-540P-201ENST00000384622 KCNK12Q9HB15 430 aa1.76□□□□□ -2.13
RNU6-540P-201ENST00000384622 DCP1AQ9NPI6 582 aaPredicted RBP1.76□□□□□ -2.13
RNU6-540P-201ENST00000384622 KCNH4Q9UQ05 1017 aa1.76□□□□□ -2.13
RNU6-540P-201ENST00000384622 PCDHB11Q9Y5F2 797 aa1.76□□□□□ -2.13
RNU6-540P-201ENST00000384622 FAM170BA6NMN3 283 aa1.75□□□□□ -2.13
RNU6-540P-201ENST00000384622 GAS2O43903 313 aaKnown RBP1.75□□□□□ -2.13
RNU6-540P-201ENST00000384622 TACR2P21452 398 aa1.75□□□□□ -2.13
RNU6-540P-201ENST00000384622 SSTR3P32745 418 aaPredicted RBP1.75□□□□□ -2.13
RNU6-540P-201ENST00000384622 AFMP43652 599 aa1.75□□□□□ -2.13
RNU6-540P-201ENST00000384622 PREPP48147 710 aa1.75□□□□□ -2.13
RNU6-540P-201ENST00000384622 SMN1Q16637 294 aaKnown RBP1.75□□□□□ -2.13
RNU6-540P-201ENST00000384622 TMEM67Q5HYA8 995 aa1.75□□□□□ -2.13
RNU6-540P-201ENST00000384622 FYB2Q5VWT5 728 aa1.75□□□□□ -2.13
RNU6-540P-201ENST00000384622 KIAA1211Q6ZU35 1233 aa1.75□□□□□ -2.13
RNU6-540P-201ENST00000384622 USP51Q70EK9 711 aa1.75□□□□□ -2.13
RNU6-540P-201ENST00000384622 IL22RA1Q8N6P7 574 aa1.75□□□□□ -2.13
RNU6-540P-201ENST00000384622 FEZF2Q8TBJ5 459 aa1.75□□□□□ -2.13
RNU6-540P-201ENST00000384622 BRD7Q9NPI1 651 aa1.75□□□□□ -2.13
RNU6-540P-201ENST00000384622 FAM95CA0A1B0GW59 222 aa1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 ITGB6P18564 788 aa1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 CD68P34810 354 aaPredicted RBP1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 ADMP35318 185 aa1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 KCNQ4P56696 695 aa1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 DUOXA2Q1HG44 320 aa1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 SGO2Q562F6 1265 aa1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 ANKRD34AQ69YU3 496 aa1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 PAOXQ6QHF9 649 aa1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 ZAR1Q86SH2 424 aa1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 TEPSINQ96N21 525 aa1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 SMG9Q9H0W8 520 aaKnown RBP1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 ADAM7Q9H2U9 754 aa1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 EPB41L4BQ9H329 900 aa1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 EFCC1Q9HA90 598 aa1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 DLL4Q9NR61 685 aa1.74□□□□□ -2.13
RNU6-540P-201ENST00000384622 IRF6O14896 467 aa1.73□□□□□ -2.13
RNU6-540P-201ENST00000384622 SEMA3EO15041 775 aa1.73□□□□□ -2.13
RNU6-540P-201ENST00000384622 MYCP01106 439 aaPredicted RBP1.73□□□□□ -2.13
RNU6-540P-201ENST00000384622 ERBB2P04626 1255 aa1.73□□□□□ -2.13
RNU6-540P-201ENST00000384622 MAP2K5Q13163 448 aa1.73□□□□□ -2.13
RNU6-540P-201ENST00000384622 SEMA3FQ13275 785 aa1.73□□□□□ -2.13
RNU6-540P-201ENST00000384622 DIXDC1Q155Q3 683 aa1.73□□□□□ -2.13
RNU6-540P-201ENST00000384622 SLC23A3Q6PIS1 610 aa1.73□□□□□ -2.13
RNU6-540P-201ENST00000384622 GLCCI1Q86VQ1 547 aa1.73□□□□□ -2.13
RNU6-540P-201ENST00000384622 GALNT11Q8NCW6 608 aa1.73□□□□□ -2.13
RNU6-540P-201ENST00000384622 BAHD1Q8TBE0 780 aaPredicted RBP1.73□□□□□ -2.13
RNU6-540P-201ENST00000384622 CEP63Q96MT8 703 aa1.73□□□□□ -2.13
RNU6-540P-201ENST00000384622 PNMA5Q96PV4 448 aa1.73□□□□□ -2.13
RNU6-540P-201ENST00000384622 TBC1D2Q9BYX2 928 aa1.73□□□□□ -2.13
RNU6-540P-201ENST00000384622 K7ESM1 405 aa1.72□□□□□ -2.13
RNU6-540P-201ENST00000384622 CD96P40200 585 aa1.72□□□□□ -2.13
RNU6-540P-201ENST00000384622 MAGEA10P43363 369 aaPredicted RBP1.72□□□□□ -2.13
RNU6-540P-201ENST00000384622 CYP27A1Q02318 531 aa1.72□□□□□ -2.13
RNU6-540P-201ENST00000384622 NR6A1Q15406 480 aa1.72□□□□□ -2.13
RNU6-540P-201ENST00000384622 FDX2Q6P4F2 183 aa1.72□□□□□ -2.13
RNU6-540P-201ENST00000384622 TMEM151BQ8IW70 566 aa1.72□□□□□ -2.13
RNU6-540P-201ENST00000384622 KIRREL1Q96J84 757 aa1.72□□□□□ -2.13
RNU6-540P-201ENST00000384622 SLC26A8Q96RN1 970 aa1.72□□□□□ -2.13
RNU6-540P-201ENST00000384622 KRTAP4-3Q9BYR4 195 aa1.72□□□□□ -2.13
RNU6-540P-201ENST00000384622 PCED1AQ9H1Q7 454 aa1.72□□□□□ -2.13
RNU6-540P-201ENST00000384622 ETNK1Q9HBU6 452 aa1.72□□□□□ -2.13
RNU6-540P-201ENST00000384622 FZD7O75084 574 aa1.71□□□□□ -2.14
RNU6-540P-201ENST00000384622 ZNF385BQ569K4 471 aa1.71□□□□□ -2.14
RNU6-540P-201ENST00000384622 SEMA3GQ9NS98 782 aa1.71□□□□□ -2.14
RNU6-540P-201ENST00000384622 KCNK4Q9NYG8 393 aa1.71□□□□□ -2.14
RNU6-540P-201ENST00000384622 CABP1Q9NZU7 370 aa1.71□□□□□ -2.14
RNU6-540P-201ENST00000384622 ZBTB4Q9P1Z0 1013 aaPredicted RBP1.71□□□□□ -2.14
RNU6-540P-201ENST00000384622 CNOT11Q9UKZ1 510 aaKnown RBP1.71□□□□□ -2.14
RNU6-540P-201ENST00000384622 GTF3C5Q9Y5Q8 519 aaPredicted RBP1.71□□□□□ -2.14
RNU6-540P-201ENST00000384622 ZC3H12DA2A288 527 aaKnown RBP1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 STAU1O95793 577 aaKnown RBP1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 TXLNAP40222 546 aa1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 INHBEP58166 350 aa1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 KRTAP10-11P60412 298 aa1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 ADAM17P78536 824 aa1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 CTDSPL2Q05D32 466 aa1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 QPCTQ16769 361 aa1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 SMYD5Q6GMV2 418 aa1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 ZNF765Q7L2R6 523 aa1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 Q8N1X5 172 aa1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 FOXD4L4Q8WXT5 416 aaPredicted RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 743.8 ms