RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 GPC2Q8N158 579 aa1.96□□□□□ -2.1
RNU6-42P-201ENST00000384165 SLC39A7Q92504 469 aa1.96□□□□□ -2.1
RNU6-42P-201ENST00000384165 EDAQ92838 391 aa1.96□□□□□ -2.1
RNU6-42P-201ENST00000384165 SYTL4Q96C24 671 aaPredicted RBP1.96□□□□□ -2.1
RNU6-42P-201ENST00000384165 CRELD1Q96HD1 420 aa1.96□□□□□ -2.1
RNU6-42P-201ENST00000384165 TAOK3Q9H2K8 898 aa1.96□□□□□ -2.1
RNU6-42P-201ENST00000384165 CABP1Q9NZU7 370 aa1.96□□□□□ -2.1
RNU6-42P-201ENST00000384165 CDK11AQ9UQ88 783 aaPredicted RBP1.96□□□□□ -2.1
RNU6-42P-201ENST00000384165 GJA3Q9Y6H8 435 aa1.96□□□□□ -2.1
RNU6-42P-201ENST00000384165 UBR4Q5T4S7 5183 aa1.96□□□□□ -2.1
RNU6-42P-201ENST00000384165 UBR1Q8IWV7 1749 aa1.96□□□□□ -2.1
RNU6-42P-201ENST00000384165 OTOGLQ3ZCN5 2332 aa1.96□□□□□ -2.1
RNU6-42P-201ENST00000384165 INSRP06213 1382 aa1.96□□□□□ -2.1
RNU6-42P-201ENST00000384165 ARHGAP5Q13017 1502 aa1.96□□□□□ -2.1
RNU6-42P-201ENST00000384165 COL18A1P39060 1754 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 SALL1Q9NSC2 1324 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 MYO15AQ9UKN7 3530 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 NRAPQ86VF7 1730 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 CLIP1P30622 1438 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 GTPBP6O43824 516 aaPredicted RBP1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 DNAJB2P25686 324 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 EPS15P42566 896 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 VCPP55072 806 aaKnown RBP1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 INHBEP58166 350 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 CACNB1Q02641 598 aaPredicted RBP1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 HIST2H2BCQ6DN03 193 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 HIST2H2BDQ6DRA6 164 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 TRIM67Q6ZTA4 783 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 TOM1L2Q6ZVM7 507 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 CRACR2BQ8N4Y2 399 aaPredicted RBP1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 DIS3LQ8TF46 1054 aaKnown RBP1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 ZCCHC14Q8WYQ9 949 aaKnown RBP1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 DDX1Q92499 740 aaKnown RBP1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 ZNF428Q96B54 188 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 HAUS7Q99871 368 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 NBPF3Q9H094 633 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 ANKMY1Q9P2S6 941 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 NF1P21359 2839 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 SCN4AP35499 1836 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 COL4A4P53420 1690 aaPredicted RBP1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 CABIN1Q9Y6J0 2220 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 FLNAP21333 2647 aaKnown RBP1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 FREM2Q5SZK8 3169 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 DHX29Q7Z478 1369 aaKnown RBP1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 SBNO2Q9Y2G9 1366 aa1.95□□□□□ -2.1
RNU6-42P-201ENST00000384165 TRIOO75962 3097 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 ARHGAP31Q2M1Z3 1444 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 C21orf2O43822 256 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 SEC24BO95487 1268 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 PMLP29590 882 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 PRMT2P55345 433 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 LMNB2Q03252 620 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 FOXC1Q12948 553 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 KCNC3Q14003 757 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 KIF22Q14807 665 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 COL28A1Q2UY09 1125 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 N4BP2L1Q5TBK1 243 aaPredicted RBP1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 OTUD7BQ6GQQ9 843 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 CCDC129Q6ZRS4 1044 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 ZC3H18Q86VM9 953 aaKnown RBP1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 RASAL3Q86YV0 1011 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 DCLK2Q8N568 766 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 CYP2W1Q8TAV3 490 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 ZC3H15Q8WU90 426 aaKnown RBP1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 LRIG1Q96JA1 1093 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 TRIM47Q96LD4 638 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 SMOC2Q9H3U7 446 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 ZNF768Q9H5H4 540 aaKnown RBP1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 CBX8Q9HC52 389 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 NXF1Q9UBU9 619 aaKnown RBP1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 COL14A1Q05707 1796 aaKnown RBP1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 N4BP2Q86UW6 1770 aaPredicted RBP1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 KIDINS220Q9ULH0 1771 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 ANKHD1Q8IWZ3 2542 aaKnown RBP1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 SBNO1A3KN83 1393 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 LOC400499M0QZD8 3231 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 ASXL3Q9C0F0 2248 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 SBF2Q86WG5 1849 aa1.94□□□□□ -2.1
RNU6-42P-201ENST00000384165 GAKO14976 1311 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 TNS3Q68CZ2 1445 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 PDZD2O15018 2839 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 TRPM2O94759 1503 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 TRPM7Q96QT4 1865 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 BLACEA4D250 179 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 H0YIN7 160 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 CAPN9O14815 690 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 PAK3O75914 559 aaPredicted RBP1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 GYS1P13807 737 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 SSFA2P28290 1259 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 GRK4P32298 578 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 CSRP3P50461 194 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 EIF6P56537 245 aaKnown RBP1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 EPHA10Q5JZY3 1008 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 C9orf50Q5SZB4 431 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 NBPF12Q5TAG4 269 aaPredicted RBP1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 MMP21Q8N119 569 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 ZNF843Q8N446 348 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 SPATA3Q8NHX4 192 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 RAET1EQ8TD07 263 aa1.93□□□□□ -2.1
RNU6-42P-201ENST00000384165 RNPC3Q96LT9 517 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms