RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 PDCP20941 246 aa22■■□□□ 1.11
CSPG5-202ENST00000383738 PDE4CQ08493 712 aa22■■□□□ 1.11
CSPG5-202ENST00000383738 STK38Q15208 465 aa22■■□□□ 1.11
CSPG5-202ENST00000383738 BRF1Q92994 677 aa22■■□□□ 1.11
CSPG5-202ENST00000383738 A0A1B0GUL7 405 aa22■■□□□ 1.11
CSPG5-202ENST00000383738 MPHOSPH10O00566 681 aaKnown RBP22■■□□□ 1.11
CSPG5-202ENST00000383738 MICU3Q86XE3 530 aa22■■□□□ 1.11
CSPG5-202ENST00000383738 PPP1R9BQ96SB3 815 aa22■■□□□ 1.11
CSPG5-202ENST00000383738 NEURL1BA8MQ27 555 aa21.99■■□□□ 1.11
CSPG5-202ENST00000383738 ADGRB3O60242 1522 aa21.99■■□□□ 1.11
CSPG5-202ENST00000383738 TPTE2Q6XPS3 522 aa21.99■■□□□ 1.11
CSPG5-202ENST00000383738 FAM227BQ96M60 508 aa21.99■■□□□ 1.11
CSPG5-202ENST00000383738 MKNK2Q9HBH9 465 aa21.99■■□□□ 1.11
CSPG5-202ENST00000383738 SPATA31A3Q5VYP0 1347 aa21.99■■□□□ 1.11
CSPG5-202ENST00000383738 INO80Q9ULG1 1556 aaPredicted RBP21.99■■□□□ 1.11
CSPG5-202ENST00000383738 SLC3A2P08195 630 aaKnown RBP21.98■■□□□ 1.11
CSPG5-202ENST00000383738 ZNF445P59923 1031 aa21.98■■□□□ 1.11
CSPG5-202ENST00000383738 LUZP1Q86V48 1076 aa21.98■■□□□ 1.11
CSPG5-202ENST00000383738 ISM2Q6H9L7 571 aa21.97■■□□□ 1.11
CSPG5-202ENST00000383738 WDR17Q8IZU2 1322 aa21.97■■□□□ 1.11
CSPG5-202ENST00000383738 CHMLP26374 656 aa21.97■■□□□ 1.11
CSPG5-202ENST00000383738 MSL1Q68DK7 614 aa21.97■■□□□ 1.11
CSPG5-202ENST00000383738 PAG1Q9NWQ8 432 aa21.97■■□□□ 1.11
CSPG5-202ENST00000383738 CYP7A1P22680 504 aa21.97■■□□□ 1.11
CSPG5-202ENST00000383738 GJB2P29033 226 aa21.97■■□□□ 1.11
CSPG5-202ENST00000383738 ZNF165P49910 485 aa21.97■■□□□ 1.11
CSPG5-202ENST00000383738 ANKRD1Q15327 319 aa21.97■■□□□ 1.11
CSPG5-202ENST00000383738 SH3TC1Q8TE82 1336 aa21.97■■□□□ 1.11
CSPG5-202ENST00000383738 IFIT3O14879 490 aaKnown RBP21.96■■□□□ 1.11
CSPG5-202ENST00000383738 ZNF853P0CG23 659 aa21.96■■□□□ 1.11
CSPG5-202ENST00000383738 BEND3Q5T5X7 828 aa21.96■■□□□ 1.11
CSPG5-202ENST00000383738 KRT32Q14532 448 aa21.96■■□□□ 1.11
CSPG5-202ENST00000383738 TRAPPC3LQ5T215 181 aa21.96■■□□□ 1.11
CSPG5-202ENST00000383738 CARD10Q9BWT7 1032 aa21.96■■□□□ 1.11
CSPG5-202ENST00000383738 HS1BP3Q53T59 392 aa21.96■■□□□ 1.11
CSPG5-202ENST00000383738 DHX37Q8IY37 1157 aaKnown RBP21.96■■□□□ 1.11
CSPG5-202ENST00000383738 BCL2L12Q9HB09 334 aa21.96■■□□□ 1.11
CSPG5-202ENST00000383738 CCDC87Q9NVE4 849 aa21.96■■□□□ 1.11
CSPG5-202ENST00000383738 LIMCH1Q9UPQ0 1083 aa21.96■■□□□ 1.11
CSPG5-202ENST00000383738 PIGBQ92521 554 aa21.95■■□□□ 1.1
CSPG5-202ENST00000383738 ABCC4O15439 1325 aa21.95■■□□□ 1.1
CSPG5-202ENST00000383738 TRIM22Q8IYM9 498 aa21.95■■□□□ 1.1
CSPG5-202ENST00000383738 TULP4Q9NRJ4 1543 aa21.95■■□□□ 1.1
CSPG5-202ENST00000383738 RXRAP19793 462 aa21.95■■□□□ 1.1
CSPG5-202ENST00000383738 BIN1O00499 593 aa21.94■■□□□ 1.1
CSPG5-202ENST00000383738 RTL1A6NKG5 1358 aa21.94■■□□□ 1.1
CSPG5-202ENST00000383738 EYA2O00167 538 aa21.94■■□□□ 1.1
CSPG5-202ENST00000383738 MYRIPQ8NFW9 859 aa21.94■■□□□ 1.1
CSPG5-202ENST00000383738 EAF2Q96CJ1 260 aaPredicted RBP21.94■■□□□ 1.1
CSPG5-202ENST00000383738 ZSWIM4Q9H7M6 989 aa21.94■■□□□ 1.1
CSPG5-202ENST00000383738 GOLGA8BA8MQT2 603 aa21.94■■□□□ 1.1
CSPG5-202ENST00000383738 LRRC24Q50LG9 513 aa21.94■■□□□ 1.1
CSPG5-202ENST00000383738 SIRT2Q8IXJ6 389 aa21.94■■□□□ 1.1
CSPG5-202ENST00000383738 UBXN4Q92575 508 aa21.94■■□□□ 1.1
CSPG5-202ENST00000383738 NEK1Q96PY6 1258 aa21.94■■□□□ 1.1
CSPG5-202ENST00000383738 LOC102724428A0A0B4J2F2 783 aa21.93■■□□□ 1.1
CSPG5-202ENST00000383738 HOXB7P09629 217 aa21.93■■□□□ 1.1
CSPG5-202ENST00000383738 BRPF1P55201 1214 aaPredicted RBP21.93■■□□□ 1.1
CSPG5-202ENST00000383738 SIK1P57059 783 aa21.93■■□□□ 1.1
CSPG5-202ENST00000383738 ERVV-2B6SEH9 535 aa21.93■■□□□ 1.1
CSPG5-202ENST00000383738 SYNE4Q8N205 404 aa21.93■■□□□ 1.1
CSPG5-202ENST00000383738 PUS3Q9BZE2 481 aaKnown RBP21.93■■□□□ 1.1
CSPG5-202ENST00000383738 QTRT2Q9H974 415 aaKnown RBP21.93■■□□□ 1.1
CSPG5-202ENST00000383738 ADAMTS13Q76LX8 1427 aa21.93■■□□□ 1.1
CSPG5-202ENST00000383738 URI1O94763 535 aaPredicted RBP21.93■■□□□ 1.1
CSPG5-202ENST00000383738 VAT1LQ9HCJ6 419 aa21.93■■□□□ 1.1
CSPG5-202ENST00000383738 UBE2HP62256 183 aa21.92■■□□□ 1.1
CSPG5-202ENST00000383738 CCDC191Q8NCU4 936 aa21.92■■□□□ 1.1
CSPG5-202ENST00000383738 TRIM37O94972 964 aa21.92■■□□□ 1.1
CSPG5-202ENST00000383738 ANO6Q4KMQ2 910 aa21.92■■□□□ 1.1
CSPG5-202ENST00000383738 GSPT1P15170 499 aaKnown RBP21.92■■□□□ 1.1
CSPG5-202ENST00000383738 XBP1P17861 261 aa21.92■■□□□ 1.1
CSPG5-202ENST00000383738 TNNI3KQ59H18 835 aa21.92■■□□□ 1.1
CSPG5-202ENST00000383738 DACT1Q9NYF0 836 aa21.92■■□□□ 1.1
CSPG5-202ENST00000383738 FPGT-TNNI3KV9GXZ4 949 aa21.92■■□□□ 1.1
CSPG5-202ENST00000383738 DNAJC25Q9H1X3 360 aa21.91■■□□□ 1.1
CSPG5-202ENST00000383738 APBA3O96018 575 aa21.91■■□□□ 1.1
CSPG5-202ENST00000383738 CAMSAP1Q5T5Y3 1602 aa21.91■■□□□ 1.1
CSPG5-202ENST00000383738 STX8Q9UNK0 236 aa21.91■■□□□ 1.1
CSPG5-202ENST00000383738 SERPINC1P01008 464 aa21.91■■□□□ 1.1
CSPG5-202ENST00000383738 TCIRG1Q13488 830 aa21.91■■□□□ 1.1
CSPG5-202ENST00000383738 MAGEB6Q8N7X4 407 aa21.91■■□□□ 1.1
CSPG5-202ENST00000383738 CEP135Q66GS9 1140 aa21.9■■□□□ 1.1
CSPG5-202ENST00000383738 HSP90AA4PQ58FG1 418 aa21.9■■□□□ 1.1
CSPG5-202ENST00000383738 CRACR2BQ8N4Y2 399 aaPredicted RBP21.9■■□□□ 1.1
CSPG5-202ENST00000383738 KIF18AQ8NI77 898 aa21.9■■□□□ 1.1
CSPG5-202ENST00000383738 SNAP23O00161 211 aa21.9■■□□□ 1.1
CSPG5-202ENST00000383738 KCNQ2O43526 872 aa21.9■■□□□ 1.1
CSPG5-202ENST00000383738 MCMDC2Q4G0Z9 681 aa21.9■■□□□ 1.1
CSPG5-202ENST00000383738 SEC62Q99442 399 aaKnown RBP21.9■■□□□ 1.1
CSPG5-202ENST00000383738 BABAM1Q9NWV8 329 aa21.9■■□□□ 1.1
CSPG5-202ENST00000383738 PTPRUQ92729 1446 aa21.9■■□□□ 1.1
CSPG5-202ENST00000383738 PTPRMP28827 1452 aa21.89■■□□□ 1.1
CSPG5-202ENST00000383738 ZSCAN22P10073 491 aaPredicted RBP21.89■■□□□ 1.1
CSPG5-202ENST00000383738 UNC5CLQ8IV45 518 aa21.89■■□□□ 1.1
CSPG5-202ENST00000383738 GTF3C6Q969F1 213 aa21.89■■□□□ 1.1
CSPG5-202ENST00000383738 SLC4A4Q9Y6R1 1079 aa21.89■■□□□ 1.1
CSPG5-202ENST00000383738 DIP2BQ9P265 1576 aa21.89■■□□□ 1.09
CSPG5-202ENST00000383738 ST5P78524 1137 aa21.89■■□□□ 1.09
CSPG5-202ENST00000383738 PICALMQ13492 652 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms