RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 BEND3Q5T5X7 828 aa17.26■□□□□ 0.35
TUSC3-201ENST00000382020 FBXO38Q6PIJ6 1188 aa17.26■□□□□ 0.35
TUSC3-201ENST00000382020 CABP4P57796 275 aa17.25■□□□□ 0.35
TUSC3-201ENST00000382020 CCDC144BQ3MJ40 725 aa17.25■□□□□ 0.35
TUSC3-201ENST00000382020 KRBA2Q6ZNG9 492 aa17.25■□□□□ 0.35
TUSC3-201ENST00000382020 SPTLC3Q9NUV7 552 aa17.25■□□□□ 0.35
TUSC3-201ENST00000382020 MYOM1P52179 1685 aa17.25■□□□□ 0.35
TUSC3-201ENST00000382020 LAMC1P11047 1609 aa17.25■□□□□ 0.35
TUSC3-201ENST00000382020 PNPLA6Q8IY17 1366 aa17.25■□□□□ 0.35
TUSC3-201ENST00000382020 STAP2Q9UGK3 403 aa17.25■□□□□ 0.35
TUSC3-201ENST00000382020 DDX41Q9UJV9 622 aaKnown RBP17.25■□□□□ 0.35
TUSC3-201ENST00000382020 KARSQ15046 597 aaKnown RBP17.25■□□□□ 0.35
TUSC3-201ENST00000382020 ANKRD13DQ6ZTN6 518 aa17.25■□□□□ 0.35
TUSC3-201ENST00000382020 CCDC191Q8NCU4 936 aa17.25■□□□□ 0.35
TUSC3-201ENST00000382020 ANKRD24Q8TF21 1146 aa17.25■□□□□ 0.35
TUSC3-201ENST00000382020 CEP126Q9P2H0 1117 aa17.25■□□□□ 0.35
TUSC3-201ENST00000382020 RSPH14Q9UHP6 348 aa17.25■□□□□ 0.35
TUSC3-201ENST00000382020 KMT5BQ4FZB7 885 aa17.24■□□□□ 0.35
TUSC3-201ENST00000382020 GOLGA6L1Q8N7Z2 621 aa17.24■□□□□ 0.35
TUSC3-201ENST00000382020 KIAA0232Q92628 1395 aa17.24■□□□□ 0.35
TUSC3-201ENST00000382020 HNRNPH2P55795 449 aaKnown RBP17.24■□□□□ 0.35
TUSC3-201ENST00000382020 DHX37Q8IY37 1157 aaKnown RBP17.24■□□□□ 0.35
TUSC3-201ENST00000382020 CLSTN2Q9H4D0 955 aa17.24■□□□□ 0.35
TUSC3-201ENST00000382020 DDX17Q92841 729 aaKnown RBP17.24■□□□□ 0.35
TUSC3-201ENST00000382020 MYL10Q9BUA6 226 aa17.24■□□□□ 0.35
TUSC3-201ENST00000382020 ZSWIM6Q9HCJ5 1215 aa17.24■□□□□ 0.35
TUSC3-201ENST00000382020 ABCC3O15438 1527 aa17.24■□□□□ 0.35
TUSC3-201ENST00000382020 UTP14AQ9BVJ6 771 aaKnown RBP17.23■□□□□ 0.35
TUSC3-201ENST00000382020 RPAP1Q9BWH6 1393 aaPredicted RBP17.23■□□□□ 0.35
TUSC3-201ENST00000382020 GNG11P61952 73 aa17.23■□□□□ 0.35
TUSC3-201ENST00000382020 GPIHBP1Q8IV16 184 aa17.23■□□□□ 0.35
TUSC3-201ENST00000382020 IQSEC3Q9UPP2 1182 aaPredicted RBP17.23■□□□□ 0.35
TUSC3-201ENST00000382020 TTC41PQ6P2S7 1318 aa17.23■□□□□ 0.35
TUSC3-201ENST00000382020 IBSPP21815 317 aaPredicted RBP17.23■□□□□ 0.35
TUSC3-201ENST00000382020 FAM193AP78312 1265 aa17.23■□□□□ 0.35
TUSC3-201ENST00000382020 LINS1Q8NG48 757 aa17.23■□□□□ 0.35
TUSC3-201ENST00000382020 AKAP17AQ02040 695 aaKnown RBP17.22■□□□□ 0.35
TUSC3-201ENST00000382020 PCMTD1Q96MG8 357 aaPredicted RBP17.22■□□□□ 0.35
TUSC3-201ENST00000382020 CNNM1Q9NRU3 951 aa17.22■□□□□ 0.35
TUSC3-201ENST00000382020 PHACTR2O75167 634 aa17.22■□□□□ 0.35
TUSC3-201ENST00000382020 TOP1P11387 765 aaKnown RBP17.22■□□□□ 0.35
TUSC3-201ENST00000382020 CCDC57Q2TAC2 916 aa17.22■□□□□ 0.35
TUSC3-201ENST00000382020 ANKRD7Q92527 254 aa17.22■□□□□ 0.35
TUSC3-201ENST00000382020 CWC15Q9P013 229 aaKnown RBP17.22■□□□□ 0.35
TUSC3-201ENST00000382020 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
TUSC3-201ENST00000382020 TATP17735 454 aaPredicted RBP17.22■□□□□ 0.35
TUSC3-201ENST00000382020 SLFN14P0C7P3 912 aa17.21■□□□□ 0.35
TUSC3-201ENST00000382020 STX17P56962 302 aa17.21■□□□□ 0.35
TUSC3-201ENST00000382020 PPARDQ03181 441 aa17.21■□□□□ 0.35
TUSC3-201ENST00000382020 MCMDC2Q4G0Z9 681 aa17.21■□□□□ 0.35
TUSC3-201ENST00000382020 CCDC158Q5M9N0 1113 aa17.21■□□□□ 0.35
TUSC3-201ENST00000382020 LEKR1Q6ZMV7 388 aa17.21■□□□□ 0.35
TUSC3-201ENST00000382020 PGBD1Q96JS3 809 aa17.21■□□□□ 0.35
TUSC3-201ENST00000382020 TTC14Q96N46 770 aa17.21■□□□□ 0.35
TUSC3-201ENST00000382020 SASH1O94885 1247 aa17.21■□□□□ 0.35
TUSC3-201ENST00000382020 MRPS27Q92552 414 aaKnown RBP17.21■□□□□ 0.35
TUSC3-201ENST00000382020 ROBO2Q9HCK4 1378 aa17.21■□□□□ 0.35
TUSC3-201ENST00000382020 MED14O60244 1454 aa17.21■□□□□ 0.35
TUSC3-201ENST00000382020 CFAP74Q9C0B2 1584 aa17.21■□□□□ 0.35
TUSC3-201ENST00000382020 UBASH3AP57075 661 aa17.2■□□□□ 0.34
TUSC3-201ENST00000382020 HELBQ8NG08 1087 aaPredicted RBP17.2■□□□□ 0.34
TUSC3-201ENST00000382020 EPC1Q9H2F5 836 aa17.2■□□□□ 0.34
TUSC3-201ENST00000382020 GYS2P54840 703 aa17.2■□□□□ 0.34
TUSC3-201ENST00000382020 XPO4Q9C0E2 1151 aaKnown RBP17.2■□□□□ 0.34
TUSC3-201ENST00000382020 ARAP3Q8WWN8 1544 aa17.2■□□□□ 0.34
TUSC3-201ENST00000382020 MCM6Q14566 821 aa17.19■□□□□ 0.34
TUSC3-201ENST00000382020 AK7Q96M32 723 aa17.19■□□□□ 0.34
TUSC3-201ENST00000382020 ZCCHC17Q9NP64 241 aaKnown RBP17.19■□□□□ 0.34
TUSC3-201ENST00000382020 SEC31AO94979 1220 aaKnown RBP17.19■□□□□ 0.34
TUSC3-201ENST00000382020 SCRN1Q12765 414 aa17.19■□□□□ 0.34
TUSC3-201ENST00000382020 IMMTQ16891 758 aaKnown RBP17.19■□□□□ 0.34
TUSC3-201ENST00000382020 CNNM3Q8NE01 707 aa17.19■□□□□ 0.34
TUSC3-201ENST00000382020 PHKBQ93100 1093 aa17.19■□□□□ 0.34
TUSC3-201ENST00000382020 ERO1AQ96HE7 468 aa17.19■□□□□ 0.34
TUSC3-201ENST00000382020 ORAI2Q96SN7 254 aa17.19■□□□□ 0.34
TUSC3-201ENST00000382020 ZKSCAN3Q9BRR0 538 aa17.19■□□□□ 0.34
TUSC3-201ENST00000382020 CYP21A2P08686 494 aa17.19■□□□□ 0.34
TUSC3-201ENST00000382020 GTF2A1P52655 376 aaPredicted RBP17.19■□□□□ 0.34
TUSC3-201ENST00000382020 SAFBQ15424 915 aaKnown RBP eCLIP17.19■□□□□ 0.34
TUSC3-201ENST00000382020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.19■□□□□ 0.34
TUSC3-201ENST00000382020 PPRC1Q5VV67 1664 aaKnown RBP17.18■□□□□ 0.34
TUSC3-201ENST00000382020 EPHA10Q5JZY3 1008 aa17.18■□□□□ 0.34
TUSC3-201ENST00000382020 LZTFL1Q9NQ48 299 aa17.18■□□□□ 0.34
TUSC3-201ENST00000382020 A0A0G2JLW4 131 aa17.18■□□□□ 0.34
TUSC3-201ENST00000382020 ANKRD65E5RJM6 399 aa17.18■□□□□ 0.34
TUSC3-201ENST00000382020 COBLO75128 1261 aa17.18■□□□□ 0.34
TUSC3-201ENST00000382020 AFMP43652 599 aa17.18■□□□□ 0.34
TUSC3-201ENST00000382020 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
TUSC3-201ENST00000382020 CARD6Q9BX69 1037 aa17.18■□□□□ 0.34
TUSC3-201ENST00000382020 PUF60Q9UHX1 559 aaKnown RBP17.18■□□□□ 0.34
TUSC3-201ENST00000382020 DBNLQ9UJU6 430 aaKnown RBP17.18■□□□□ 0.34
TUSC3-201ENST00000382020 TRMT44Q8IYL2 757 aaKnown RBP17.17■□□□□ 0.34
TUSC3-201ENST00000382020 CMTR1Q8N1G2 835 aaKnown RBP17.17■□□□□ 0.34
TUSC3-201ENST00000382020 CCDC102AQ96A19 550 aa17.17■□□□□ 0.34
TUSC3-201ENST00000382020 HINFPQ9BQA5 517 aa17.17■□□□□ 0.34
TUSC3-201ENST00000382020 SPTLC2O15270 562 aa17.17■□□□□ 0.34
TUSC3-201ENST00000382020 RNMTO43148 476 aaKnown RBP17.17■□□□□ 0.34
TUSC3-201ENST00000382020 SYKP43405 635 aa17.17■□□□□ 0.34
TUSC3-201ENST00000382020 DPCR1Q3MIW9 517 aa17.17■□□□□ 0.34
TUSC3-201ENST00000382020 LRRC8AQ8IWT6 810 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms