RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 FAM50BQ9Y247 325 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 SLC20A2Q08357 652 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 PTPROQ16827 1216 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 DEPDC4Q8N2C3 294 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 ZNF513Q8N8E2 541 aaPredicted RBP6.56□□□□□ -1.36
RFC1-202ENST00000381897 CCDC89Q8N998 374 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 CCDC191Q8NCU4 936 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 DDX11Q96FC9 970 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 MPP4Q96JB8 637 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 CDC5LQ99459 802 aaKnown RBP6.56□□□□□ -1.36
RFC1-202ENST00000381897 SKILP12757 684 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 TMED8Q6PL24 325 aaPredicted RBP6.56□□□□□ -1.36
RFC1-202ENST00000381897 ANAPC16Q96DE5 110 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 NCAPGQ9BPX3 1015 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 SFMBT1Q9UHJ3 866 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 LRRFIP2Q9Y608 721 aaKnown RBP6.56□□□□□ -1.36
RFC1-202ENST00000381897 RTEL1-TNFRSF6BF6WH68 1400 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 ADCY10Q96PN6 1610 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 DPYSL4O14531 572 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 POLR3GO15318 223 aaPredicted RBP6.56□□□□□ -1.36
RFC1-202ENST00000381897 CTIFO43310 598 aaKnown RBP6.56□□□□□ -1.36
RFC1-202ENST00000381897 SKIP12755 728 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 CCDC102AQ96A19 550 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 COMMD10Q9Y6G5 202 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 ARHGAP31Q2M1Z3 1444 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 PRC1O43663 620 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 CD2BP2O95400 341 aaKnown RBP6.56□□□□□ -1.36
RFC1-202ENST00000381897 YY1P25490 414 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 CDC25BP30305 580 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 TOMM20Q15388 145 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 SND1Q7KZF4 910 aaKnown RBP eCLIP6.56□□□□□ -1.36
RFC1-202ENST00000381897 C17orf53Q8N3J3 647 aaPredicted RBP6.56□□□□□ -1.36
RFC1-202ENST00000381897 UPF3BQ9BZI7 483 aaKnown RBP6.56□□□□□ -1.36
RFC1-202ENST00000381897 PICK1Q9NRD5 415 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 AASDHPPTQ9NRN7 309 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.56□□□□□ -1.36
RFC1-202ENST00000381897 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.56□□□□□ -1.36
RFC1-202ENST00000381897 UHRF1BP1LA0JNW5 1464 aa6.56□□□□□ -1.36
RFC1-202ENST00000381897 ZNF75DP51815 510 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 ANO6Q4KMQ2 910 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 BRMS1Q9HCU9 246 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 CTNNA3Q9UI47 895 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 LIG1P18858 919 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 MCM3P25205 808 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 VAC14Q08AM6 782 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 ODR4Q5SWX8 454 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 TCERG1LQ5VWI1 586 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 C1orf228Q6PIY5 440 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 OLFM4Q6UX06 510 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 BARGINQ6ZT62 677 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 IQCA1Q86XH1 822 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 FMNL3Q8IVF7 1028 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 MTMR8Q96EF0 704 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 PRDM16Q9HAZ2 1276 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 RBM28Q9NW13 759 aaKnown RBP6.55□□□□□ -1.36
RFC1-202ENST00000381897 MAGEC2Q9UBF1 373 aaPredicted RBP6.55□□□□□ -1.36
RFC1-202ENST00000381897 RGS12O14924 1447 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 EVA1CP58658 441 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 IRX5P78411 483 aaPredicted RBP6.55□□□□□ -1.36
RFC1-202ENST00000381897 NCBP1Q09161 790 aaKnown RBP6.55□□□□□ -1.36
RFC1-202ENST00000381897 SIX5Q8N196 739 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 CTNNBL1Q8WYA6 563 aaPredicted RBP6.55□□□□□ -1.36
RFC1-202ENST00000381897 SDF4Q9BRK5 362 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 GGNBP2Q9H3C7 697 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 ARFGAP3Q9NP61 516 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 SLC52A1Q9NWF4 448 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 ZNF652Q9Y2D9 606 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 SBNO2Q9Y2G9 1366 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 ABCC10Q5T3U5 1492 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 ZNF518AQ6AHZ1 1483 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 LOC102724159A0A0B4J2E5 919 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 DNAJC6O75061 913 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 CUL4AQ13619 759 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 PWP2Q15269 919 aaKnown RBP6.55□□□□□ -1.36
RFC1-202ENST00000381897 CAMK4Q16566 473 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 KRBA2Q6ZNG9 492 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 FAM135BQ49AJ0 1406 aa6.55□□□□□ -1.36
RFC1-202ENST00000381897 MAP4K4O95819 1239 aaPredicted RBP6.54□□□□□ -1.36
RFC1-202ENST00000381897 RASA1P20936 1047 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 GJB2P29033 226 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 CASQ1P31415 396 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 LMAN1P49257 510 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 NLRP6P59044 892 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 PRPF4BQ13523 1007 aaKnown RBP6.54□□□□□ -1.36
RFC1-202ENST00000381897 DPH6Q7L8W6 267 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 ZNF710Q8N1W2 664 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 DYDC1Q8WWB3 177 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 LRP2BPQ9P2M1 347 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 PCSK2P16519 638 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 KRT20P35900 424 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 MAPK9P45984 424 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 ZNF211Q13398 564 aaPredicted RBP6.54□□□□□ -1.36
RFC1-202ENST00000381897 ZSCAN25Q6NSZ9 544 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 TRIML1Q8N9V2 468 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 NPHP3Q7Z494 1330 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 FANCAO15360 1455 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 ATP10AO60312 1499 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 PDE1AP54750 535 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 ZNF280DQ6N043 979 aa6.54□□□□□ -1.36
RFC1-202ENST00000381897 ERC1Q8IUD2 1116 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms