RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 SLC3A2P08195 630 aaKnown RBP12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 APOBRQ0VD83 1088 aa12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 POLA2Q14181 598 aa12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 DPCR1Q3MIW9 517 aa12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 SLFNL1Q499Z3 407 aa12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 OTUD7BQ6GQQ9 843 aa12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 DHX40Q8IX18 779 aaKnown RBP12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 RASSF4Q9H2L5 321 aa12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 MAP3K2Q9Y2U5 619 aa12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 FHOD1Q9Y613 1164 aa12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 KRT32Q14532 448 aa12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 ZSCAN26Q16670 478 aa12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 TTLL5Q6EMB2 1281 aa12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 LEKR1Q6ZMV7 388 aa12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 SYNE3Q6ZMZ3 975 aa12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 MRPS27Q92552 414 aaKnown RBP12.97□□□□□ -0.33
NPC1L1-202ENST00000381160 PTPDC1A2A3K4 754 aa12.96□□□□□ -0.33
NPC1L1-202ENST00000381160 MCM6Q14566 821 aa12.96□□□□□ -0.33
NPC1L1-202ENST00000381160 SMARCE1Q969G3 411 aa12.96□□□□□ -0.33
NPC1L1-202ENST00000381160 SEC62Q99442 399 aaKnown RBP12.96□□□□□ -0.33
NPC1L1-202ENST00000381160 TEX2Q8IWB9 1127 aa12.96□□□□□ -0.33
NPC1L1-202ENST00000381160 IL17REQ8NFR9 667 aa12.96□□□□□ -0.33
NPC1L1-202ENST00000381160 ARFGAP3Q9NP61 516 aa12.96□□□□□ -0.33
NPC1L1-202ENST00000381160 CCP110O43303 1012 aa12.96□□□□□ -0.34
NPC1L1-202ENST00000381160 PLA2G4AP47712 749 aa12.96□□□□□ -0.34
NPC1L1-202ENST00000381160 ETF1P62495 437 aaKnown RBP12.96□□□□□ -0.34
NPC1L1-202ENST00000381160 SMC1AQ14683 1233 aaKnown RBP12.96□□□□□ -0.34
NPC1L1-202ENST00000381160 STK11IPQ8N1F8 1099 aa12.96□□□□□ -0.34
NPC1L1-202ENST00000381160 EAF2Q96CJ1 260 aaPredicted RBP12.96□□□□□ -0.34
NPC1L1-202ENST00000381160 CASQ1P31415 396 aa12.95□□□□□ -0.34
NPC1L1-202ENST00000381160 IL17RAQ96F46 866 aa12.95□□□□□ -0.34
NPC1L1-202ENST00000381160 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.95□□□□□ -0.34
NPC1L1-202ENST00000381160 TOP1P11387 765 aaKnown RBP12.95□□□□□ -0.34
NPC1L1-202ENST00000381160 UBASH3AP57075 661 aa12.95□□□□□ -0.34
NPC1L1-202ENST00000381160 DHX37Q8IY37 1157 aaKnown RBP12.95□□□□□ -0.34
NPC1L1-202ENST00000381160 LMTK2Q8IWU2 1503 aa12.95□□□□□ -0.34
NPC1L1-202ENST00000381160 MAP3K5Q99683 1374 aa12.95□□□□□ -0.34
NPC1L1-202ENST00000381160 ARMCX5Q6P1M9 558 aa12.95□□□□□ -0.34
NPC1L1-202ENST00000381160 GOLGA6L1Q8N7Z2 621 aa12.95□□□□□ -0.34
NPC1L1-202ENST00000381160 ORC3Q9UBD5 711 aaPredicted RBP12.95□□□□□ -0.34
NPC1L1-202ENST00000381160 FEZ2Q9UHY8 353 aaPredicted RBP12.95□□□□□ -0.34
NPC1L1-202ENST00000381160 RBM43Q6ZSC3 357 aaKnown RBP12.94□□□□□ -0.34
NPC1L1-202ENST00000381160 HMG20BQ9P0W2 317 aa12.94□□□□□ -0.34
NPC1L1-202ENST00000381160 TRIM66O15016 1216 aa12.94□□□□□ -0.34
NPC1L1-202ENST00000381160 SCRN1Q12765 414 aa12.94□□□□□ -0.34
NPC1L1-202ENST00000381160 DDX46Q7L014 1031 aaKnown RBP12.94□□□□□ -0.34
NPC1L1-202ENST00000381160 HDAC5Q9UQL6 1122 aa12.94□□□□□ -0.34
NPC1L1-202ENST00000381160 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
NPC1L1-202ENST00000381160 CPLX1O14810 134 aa12.94□□□□□ -0.34
NPC1L1-202ENST00000381160 H2AFXP16104 143 aaPredicted RBP12.94□□□□□ -0.34
NPC1L1-202ENST00000381160 BEND3Q5T5X7 828 aa12.94□□□□□ -0.34
NPC1L1-202ENST00000381160 PHACTR2O75167 634 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 FANCCQ00597 558 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 KARSQ15046 597 aaKnown RBP12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 CREBRFQ8IUR6 639 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 NEUROD6Q96NK8 337 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 VPS18Q9P253 973 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 IMPACTQ9P2X3 320 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 KCNQ3O43525 872 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 CHGBP05060 677 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 MARCKSP29966 332 aaPredicted RBP12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 NDUFA8P51970 172 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 CPS1P31327 1500 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 ZSCAN12O43309 604 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 TPM1P09493 284 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 ATP1A3P13637 1013 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 CCDC102AQ96A19 550 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 CHMP4CQ96CF2 233 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 PRR36Q9H6K5 1346 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 TOMM22Q9NS69 142 aa12.93□□□□□ -0.34
NPC1L1-202ENST00000381160 BTBD11A6QL63 1104 aa12.92□□□□□ -0.34
NPC1L1-202ENST00000381160 RIC3Q7Z5B4 369 aa12.92□□□□□ -0.34
NPC1L1-202ENST00000381160 PCDHA7Q9UN72 937 aa12.92□□□□□ -0.34
NPC1L1-202ENST00000381160 OLFM4Q6UX06 510 aa12.92□□□□□ -0.34
NPC1L1-202ENST00000381160 RGS22Q8NE09 1264 aa12.92□□□□□ -0.34
NPC1L1-202ENST00000381160 CCDC12Q8WUD4 166 aaPredicted RBP12.92□□□□□ -0.34
NPC1L1-202ENST00000381160 PSDA5PKW4 1024 aaPredicted RBP12.92□□□□□ -0.34
NPC1L1-202ENST00000381160 PPP2R3AQ06190 1150 aa12.92□□□□□ -0.34
NPC1L1-202ENST00000381160 KIAA1468Q9P260 1216 aa12.92□□□□□ -0.34
NPC1L1-202ENST00000381160 RIMBP3CA6NJZ7 1639 aa12.91□□□□□ -0.34
NPC1L1-202ENST00000381160 RIMBP3BA6NNM3 1639 aa12.91□□□□□ -0.34
NPC1L1-202ENST00000381160 RIMBP3Q9UFD9 1639 aa12.91□□□□□ -0.34
NPC1L1-202ENST00000381160 LRRFIP1Q32MZ4 808 aaKnown RBP12.91□□□□□ -0.34
NPC1L1-202ENST00000381160 MPRIPQ6WCQ1 1025 aa12.91□□□□□ -0.34
NPC1L1-202ENST00000381160 BICC1Q9H694 974 aaKnown RBP12.91□□□□□ -0.34
NPC1L1-202ENST00000381160 PUF60Q9UHX1 559 aaKnown RBP12.91□□□□□ -0.34
NPC1L1-202ENST00000381160 HSP90B2PQ58FF3 399 aa12.91□□□□□ -0.34
NPC1L1-202ENST00000381160 NOM1Q5C9Z4 860 aaKnown RBP12.91□□□□□ -0.34
NPC1L1-202ENST00000381160 RCOR1Q9UKL0 485 aa12.91□□□□□ -0.34
NPC1L1-202ENST00000381160 ARAP3Q8WWN8 1544 aa12.91□□□□□ -0.34
NPC1L1-202ENST00000381160 NBPF11Q86T75 865 aa12.91□□□□□ -0.34
NPC1L1-202ENST00000381160 L2HGDHQ9H9P8 463 aa12.91□□□□□ -0.34
NPC1L1-202ENST00000381160 KIDINS220Q9ULH0 1771 aa12.91□□□□□ -0.34
NPC1L1-202ENST00000381160 MYO1CO00159 1063 aa12.9□□□□□ -0.34
NPC1L1-202ENST00000381160 C8orf76Q96K31 380 aa12.9□□□□□ -0.34
NPC1L1-202ENST00000381160 SRRTQ9BXP5 876 aaKnown RBP12.9□□□□□ -0.34
NPC1L1-202ENST00000381160 LGR6Q9HBX8 967 aa12.9□□□□□ -0.34
NPC1L1-202ENST00000381160 U3KPZ7 1027 aaPredicted RBP12.9□□□□□ -0.34
NPC1L1-202ENST00000381160 ARHGEF10O15013 1369 aa12.9□□□□□ -0.34
NPC1L1-202ENST00000381160 CBFA2T2O43439 604 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms