RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 KDRP35968 1356 aa14.27□□□□□ -0.12
GABPB1-203ENST00000380877 ERBB4Q15303 1308 aa14.27□□□□□ -0.12
GABPB1-203ENST00000380877 SLC4A8Q2Y0W8 1093 aa14.27□□□□□ -0.12
GABPB1-203ENST00000380877 TRAPPC3LQ5T215 181 aa14.27□□□□□ -0.12
GABPB1-203ENST00000380877 TTLL7Q6ZT98 887 aa14.27□□□□□ -0.12
GABPB1-203ENST00000380877 ZGPATQ8N5A5 531 aaKnown RBP14.27□□□□□ -0.12
GABPB1-203ENST00000380877 PROSER3Q2NL68 480 aa14.27□□□□□ -0.13
GABPB1-203ENST00000380877 KRT23Q9C075 422 aa14.27□□□□□ -0.13
GABPB1-203ENST00000380877 GSTO1P78417 241 aa14.26□□□□□ -0.13
GABPB1-203ENST00000380877 WTAPQ15007 396 aa14.26□□□□□ -0.13
GABPB1-203ENST00000380877 ESR2Q92731 530 aa14.26□□□□□ -0.13
GABPB1-203ENST00000380877 CNNM2Q9H8M5 875 aa14.26□□□□□ -0.13
GABPB1-203ENST00000380877 MAGEC2Q9UBF1 373 aaPredicted RBP14.26□□□□□ -0.13
GABPB1-203ENST00000380877 ADGRL3Q9HAR2 1447 aa14.26□□□□□ -0.13
GABPB1-203ENST00000380877 SGSM2O43147 1006 aa14.26□□□□□ -0.13
GABPB1-203ENST00000380877 ZBTB43O43298 467 aa14.26□□□□□ -0.13
GABPB1-203ENST00000380877 EPS15P42566 896 aa14.26□□□□□ -0.13
GABPB1-203ENST00000380877 STIM1Q13586 685 aa14.26□□□□□ -0.13
GABPB1-203ENST00000380877 USP21Q9UK80 565 aa14.26□□□□□ -0.13
GABPB1-203ENST00000380877 BRINP3Q76B58 766 aa14.26□□□□□ -0.13
GABPB1-203ENST00000380877 SLC26A6Q9BXS9 759 aa14.26□□□□□ -0.13
GABPB1-203ENST00000380877 MAGEB6Q8N7X4 407 aa14.25□□□□□ -0.13
GABPB1-203ENST00000380877 KIF5BP33176 963 aa14.25□□□□□ -0.13
GABPB1-203ENST00000380877 KLHL40Q2TBA0 621 aa14.25□□□□□ -0.13
GABPB1-203ENST00000380877 QRICH2Q9H0J4 1663 aa14.25□□□□□ -0.13
GABPB1-203ENST00000380877 PRC1O43663 620 aa14.25□□□□□ -0.13
GABPB1-203ENST00000380877 PDE4CQ08493 712 aa14.25□□□□□ -0.13
GABPB1-203ENST00000380877 CCDC96Q2M329 555 aa14.25□□□□□ -0.13
GABPB1-203ENST00000380877 XAGE2Q96GT9 111 aa14.25□□□□□ -0.13
GABPB1-203ENST00000380877 AGLP35573 1532 aa14.25□□□□□ -0.13
GABPB1-203ENST00000380877 TULP4Q9NRJ4 1543 aa14.25□□□□□ -0.13
GABPB1-203ENST00000380877 SSBP05455 408 aaKnown RBP eCLIP14.25□□□□□ -0.13
GABPB1-203ENST00000380877 NLRP5P59047 1200 aa14.25□□□□□ -0.13
GABPB1-203ENST00000380877 MIGA1Q8NAN2 632 aa14.25□□□□□ -0.13
GABPB1-203ENST00000380877 STX8Q9UNK0 236 aa14.25□□□□□ -0.13
GABPB1-203ENST00000380877 PUM3Q15397 648 aaKnown RBP14.24□□□□□ -0.13
GABPB1-203ENST00000380877 FSIP1Q8NA03 581 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 ANKRD2Q9GZV1 360 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 ZHX3Q9H4I2 956 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 KAT14Q9H8E8 782 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 OFD1O75665 1012 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 TMTC2Q8N394 836 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 FAM227BQ96M60 508 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 ZSCAN16Q9H4T2 348 aaPredicted RBP14.24□□□□□ -0.13
GABPB1-203ENST00000380877 ZNF804AQ7Z570 1209 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 HELLSQ9NRZ9 838 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 DDX19AQ9NUU7 478 aaKnown RBP14.24□□□□□ -0.13
GABPB1-203ENST00000380877 MAGEB6P1A0A0J9YX57 407 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 CPA1P15085 419 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 UBE2HP62256 183 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 DHX32Q7L7V1 743 aaKnown RBP14.24□□□□□ -0.13
GABPB1-203ENST00000380877 CHST3Q7LGC8 479 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 CKAP2LQ8IYA6 745 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 CNBD1Q8NA66 436 aa14.24□□□□□ -0.13
GABPB1-203ENST00000380877 SPATA31A3Q5VYP0 1347 aa14.23□□□□□ -0.13
GABPB1-203ENST00000380877 CLTCQ00610 1675 aaKnown RBP14.23□□□□□ -0.13
GABPB1-203ENST00000380877 CCDC194A0A1B0GVG4 234 aa14.23□□□□□ -0.13
GABPB1-203ENST00000380877 GNAT2P19087 354 aa14.23□□□□□ -0.13
GABPB1-203ENST00000380877 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
GABPB1-203ENST00000380877 CCDC129Q6ZRS4 1044 aa14.23□□□□□ -0.13
GABPB1-203ENST00000380877 RUFY3Q7L099 469 aa14.23□□□□□ -0.13
GABPB1-203ENST00000380877 KBTBD3Q8NAB2 608 aa14.23□□□□□ -0.13
GABPB1-203ENST00000380877 ASAP1Q9ULH1 1129 aa14.23□□□□□ -0.13
GABPB1-203ENST00000380877 PRAMEF22A3QJZ6 481 aa14.23□□□□□ -0.13
GABPB1-203ENST00000380877 GSPT1P15170 499 aaKnown RBP14.23□□□□□ -0.13
GABPB1-203ENST00000380877 INTS4Q96HW7 963 aaKnown RBP14.23□□□□□ -0.13
GABPB1-203ENST00000380877 ZC3H12CQ9C0D7 883 aaKnown RBP14.23□□□□□ -0.13
GABPB1-203ENST00000380877 NEXMIFQ5QGS0 1516 aa14.23□□□□□ -0.13
GABPB1-203ENST00000380877 ARHGEF40Q8TER5 1519 aa14.23□□□□□ -0.13
GABPB1-203ENST00000380877 BMP2KQ9NSY1 1161 aaPredicted RBP14.22□□□□□ -0.13
GABPB1-203ENST00000380877 NDUFB9Q9Y6M9 179 aa14.22□□□□□ -0.13
GABPB1-203ENST00000380877 PNPLA6Q8IY17 1366 aa14.22□□□□□ -0.13
GABPB1-203ENST00000380877 HLA-DOAP06340 250 aa14.22□□□□□ -0.13
GABPB1-203ENST00000380877 R3HCC1Q9Y3T6 440 aaKnown RBP14.22□□□□□ -0.13
GABPB1-203ENST00000380877 ZNF76P36508 570 aa14.22□□□□□ -0.13
GABPB1-203ENST00000380877 FILIP1Q7Z7B0 1213 aa14.22□□□□□ -0.13
GABPB1-203ENST00000380877 ANO10Q9NW15 660 aa14.22□□□□□ -0.13
GABPB1-203ENST00000380877 PTPRMP28827 1452 aa14.22□□□□□ -0.13
GABPB1-203ENST00000380877 A0A0U1RQG5 324 aaPredicted RBP14.22□□□□□ -0.13
GABPB1-203ENST00000380877 EAF2Q96CJ1 260 aaPredicted RBP14.22□□□□□ -0.13
GABPB1-203ENST00000380877 LAMC1P11047 1609 aa14.21□□□□□ -0.13
GABPB1-203ENST00000380877 F8W031 263 aaPredicted RBP14.21□□□□□ -0.13
GABPB1-203ENST00000380877 SMTNL1A8MU46 457 aa14.21□□□□□ -0.13
GABPB1-203ENST00000380877 CTAGE5O15320 804 aa14.21□□□□□ -0.13
GABPB1-203ENST00000380877 RTN1Q16799 776 aa14.21□□□□□ -0.13
GABPB1-203ENST00000380877 CCDC70Q6NSX1 233 aa14.21□□□□□ -0.13
GABPB1-203ENST00000380877 SMARCE1Q969G3 411 aa14.21□□□□□ -0.13
GABPB1-203ENST00000380877 ALG1Q9BT22 464 aa14.21□□□□□ -0.13
GABPB1-203ENST00000380877 RBM27Q9P2N5 1060 aaKnown RBP14.21□□□□□ -0.13
GABPB1-203ENST00000380877 IBTKQ9P2D0 1353 aaPredicted RBP14.21□□□□□ -0.13
GABPB1-203ENST00000380877 MBD4O95243 580 aa14.21□□□□□ -0.13
GABPB1-203ENST00000380877 APOBRQ0VD83 1088 aa14.21□□□□□ -0.13
GABPB1-203ENST00000380877 IFIT1BQ5T764 474 aaKnown RBP14.21□□□□□ -0.13
GABPB1-203ENST00000380877 AXIN2Q9Y2T1 843 aa14.21□□□□□ -0.13
GABPB1-203ENST00000380877 MED14O60244 1454 aa14.21□□□□□ -0.14
GABPB1-203ENST00000380877 CDC42BPGQ6DT37 1551 aa14.21□□□□□ -0.14
GABPB1-203ENST00000380877 RAB3GAP1Q15042 981 aa14.21□□□□□ -0.14
GABPB1-203ENST00000380877 F13A1P00488 732 aa14.2□□□□□ -0.14
GABPB1-203ENST00000380877 NAP1L1P55209 391 aaKnown RBP14.2□□□□□ -0.14
GABPB1-203ENST00000380877 LPIN2Q92539 896 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms