RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 TAF5LO75529 589 aa23.13■■□□□ 1.29
GMDS-201ENST00000380805 CREB3L3Q68CJ9 461 aa23.13■■□□□ 1.29
GMDS-201ENST00000380805 NEUROD6Q96NK8 337 aa23.13■■□□□ 1.29
GMDS-201ENST00000380805 ARXQ96QS3 562 aa23.13■■□□□ 1.29
GMDS-201ENST00000380805 TRMT112Q9UI30 125 aaKnown RBP23.13■■□□□ 1.29
GMDS-201ENST00000380805 RIPOR2Q9Y4F9 1068 aa23.13■■□□□ 1.29
GMDS-201ENST00000380805 CAMTA2O94983 1202 aa23.12■■□□□ 1.29
GMDS-201ENST00000380805 ZKSCAN1P17029 563 aaPredicted RBP23.12■■□□□ 1.29
GMDS-201ENST00000380805 VPS53Q5VIR6 699 aa23.12■■□□□ 1.29
GMDS-201ENST00000380805 ZNF589Q86UQ0 364 aaPredicted RBP23.12■■□□□ 1.29
GMDS-201ENST00000380805 SYNE4Q8N205 404 aa23.12■■□□□ 1.29
GMDS-201ENST00000380805 DNAJC2Q99543 621 aaKnown RBP23.12■■□□□ 1.29
GMDS-201ENST00000380805 PAG1Q9NWQ8 432 aa23.12■■□□□ 1.29
GMDS-201ENST00000380805 HMG20BQ9P0W2 317 aa23.12■■□□□ 1.29
GMDS-201ENST00000380805 TRAK2O60296 914 aa23.11■■□□□ 1.29
GMDS-201ENST00000380805 TRIM37O94972 964 aa23.11■■□□□ 1.29
GMDS-201ENST00000380805 ITGA6P23229 1130 aa23.11■■□□□ 1.29
GMDS-201ENST00000380805 RNF20Q5VTR2 975 aa23.11■■□□□ 1.29
GMDS-201ENST00000380805 GREM2Q9H772 168 aa23.11■■□□□ 1.29
GMDS-201ENST00000380805 MYH7P12883 1935 aa23.1■■□□□ 1.29
GMDS-201ENST00000380805 SCN7AQ01118 1682 aa23.1■■□□□ 1.29
GMDS-201ENST00000380805 ANKRD18BA2A2Z9 1011 aa23.1■■□□□ 1.29
GMDS-201ENST00000380805 SLC27A2O14975 620 aa23.1■■□□□ 1.29
GMDS-201ENST00000380805 RGL2O15211 777 aa23.1■■□□□ 1.29
GMDS-201ENST00000380805 BAG4O95429 457 aaKnown RBP23.1■■□□□ 1.29
GMDS-201ENST00000380805 AK2P54819 239 aa23.1■■□□□ 1.29
GMDS-201ENST00000380805 PARP10Q53GL7 1025 aa23.1■■□□□ 1.29
GMDS-201ENST00000380805 TAF7LQ5H9L4 462 aa23.1■■□□□ 1.29
GMDS-201ENST00000380805 ZDHHC9Q9Y397 364 aa23.1■■□□□ 1.29
GMDS-201ENST00000380805 BTAF1O14981 1849 aa23.1■■□□□ 1.29
GMDS-201ENST00000380805 AKAP11Q9UKA4 1901 aa23.09■■□□□ 1.29
GMDS-201ENST00000380805 CASTP20810 708 aaKnown RBP23.09■■□□□ 1.29
GMDS-201ENST00000380805 ADCK5Q3MIX3 580 aa23.09■■□□□ 1.29
GMDS-201ENST00000380805 MCMDC2Q4G0Z9 681 aa23.09■■□□□ 1.29
GMDS-201ENST00000380805 DDX46Q7L014 1031 aaKnown RBP23.09■■□□□ 1.29
GMDS-201ENST00000380805 LIMCH1Q9UPQ0 1083 aa23.09■■□□□ 1.29
GMDS-201ENST00000380805 RTL9Q8NET4 1388 aa23.08■■□□□ 1.29
GMDS-201ENST00000380805 IFIT1P09914 478 aaKnown RBP23.08■■□□□ 1.29
GMDS-201ENST00000380805 PKP1Q13835 747 aa23.08■■□□□ 1.29
GMDS-201ENST00000380805 RUFY3Q7L099 469 aa23.08■■□□□ 1.29
GMDS-201ENST00000380805 VGLL2Q8N8G2 317 aa23.08■■□□□ 1.29
GMDS-201ENST00000380805 JAKMIP1Q96N16 626 aaKnown RBP23.08■■□□□ 1.29
GMDS-201ENST00000380805 ALDH8A1Q9H2A2 487 aaPredicted RBP23.08■■□□□ 1.29
GMDS-201ENST00000380805 HELLSQ9NRZ9 838 aa23.08■■□□□ 1.29
GMDS-201ENST00000380805 CYP46A1Q9Y6A2 500 aa23.08■■□□□ 1.29
GMDS-201ENST00000380805 NDUFB9Q9Y6M9 179 aa23.08■■□□□ 1.29
GMDS-201ENST00000380805 PSMA5P28066 241 aa23.08■■□□□ 1.28
GMDS-201ENST00000380805 SKOR2Q2VWA4 1001 aaPredicted RBP23.08■■□□□ 1.28
GMDS-201ENST00000380805 XAGE2Q96GT9 111 aa23.08■■□□□ 1.28
GMDS-201ENST00000380805 ZNF512BQ96KM6 892 aaPredicted RBP23.07■■□□□ 1.28
GMDS-201ENST00000380805 BCL11BQ9C0K0 894 aaPredicted RBP23.07■■□□□ 1.28
GMDS-201ENST00000380805 GOLIM4O00461 696 aa23.06■■□□□ 1.28
GMDS-201ENST00000380805 BRD1O95696 1058 aa23.06■■□□□ 1.28
GMDS-201ENST00000380805 CCDC158Q5M9N0 1113 aa23.06■■□□□ 1.28
GMDS-201ENST00000380805 ZMYM1Q5SVZ6 1142 aa23.06■■□□□ 1.28
GMDS-201ENST00000380805 SUSD4Q5VX71 490 aa23.06■■□□□ 1.28
GMDS-201ENST00000380805 CNTNAP4Q9C0A0 1308 aa23.06■■□□□ 1.28
GMDS-201ENST00000380805 GOLGA6L22H0YM25 854 aa23.05■■□□□ 1.28
GMDS-201ENST00000380805 KCNJ4P48050 445 aa23.05■■□□□ 1.28
GMDS-201ENST00000380805 LDHAL6AQ6ZMR3 332 aa23.05■■□□□ 1.28
GMDS-201ENST00000380805 U3KPZ7 1027 aaPredicted RBP23.05■■□□□ 1.28
GMDS-201ENST00000380805 LY75O60449 1722 aa23.05■■□□□ 1.28
GMDS-201ENST00000380805 ZSCAN31Q96LW9 406 aaPredicted RBP23.05■■□□□ 1.28
GMDS-201ENST00000380805 CCDC85AQ96PX6 553 aaPredicted RBP23.05■■□□□ 1.28
GMDS-201ENST00000380805 UTP14AQ9BVJ6 771 aaKnown RBP23.05■■□□□ 1.28
GMDS-201ENST00000380805 PDRG1Q9NUG6 133 aa23.05■■□□□ 1.28
GMDS-201ENST00000380805 CASZ1Q86V15 1759 aa23.04■■□□□ 1.28
GMDS-201ENST00000380805 HSP90B1P14625 803 aaKnown RBP23.04■■□□□ 1.28
GMDS-201ENST00000380805 ADORA1P30542 326 aa23.04■■□□□ 1.28
GMDS-201ENST00000380805 KRT32Q14532 448 aa23.04■■□□□ 1.28
GMDS-201ENST00000380805 ATP2B3Q16720 1220 aa23.04■■□□□ 1.28
GMDS-201ENST00000380805 CLEC4GQ6UXB4 293 aa23.04■■□□□ 1.28
GMDS-201ENST00000380805 SH2B1Q9NRF2 756 aaPredicted RBP23.04■■□□□ 1.28
GMDS-201ENST00000380805 NTSR2O95665 410 aa23.03■■□□□ 1.28
GMDS-201ENST00000380805 METTL24Q5JXM2 366 aa23.03■■□□□ 1.28
GMDS-201ENST00000380805 LRRFIP1Q32MZ4 808 aaKnown RBP23.02■■□□□ 1.28
GMDS-201ENST00000380805 TTC39AQ5SRH9 613 aa23.02■■□□□ 1.28
GMDS-201ENST00000380805 NOL8Q76FK4 1167 aaKnown RBP23.02■■□□□ 1.28
GMDS-201ENST00000380805 DSCC1Q9BVC3 393 aa23.02■■□□□ 1.28
GMDS-201ENST00000380805 ZNF652Q9Y2D9 606 aa23.02■■□□□ 1.28
GMDS-201ENST00000380805 LAMA4Q16363 1823 aa23.02■■□□□ 1.28
GMDS-201ENST00000380805 RNF113AO15541 343 aaKnown RBP23.02■■□□□ 1.28
GMDS-201ENST00000380805 PDE8BO95263 885 aa23.02■■□□□ 1.28
GMDS-201ENST00000380805 CPA1P15085 419 aa23.02■■□□□ 1.28
GMDS-201ENST00000380805 LINC00116Q8NCU8 138 aa23.02■■□□□ 1.28
GMDS-201ENST00000380805 SEC62Q99442 399 aaKnown RBP23.02■■□□□ 1.28
GMDS-201ENST00000380805 COL24A1Q17RW2 1714 aa23.02■■□□□ 1.28
GMDS-201ENST00000380805 MROH5Q6ZUA9 1318 aa23.02■■□□□ 1.27
GMDS-201ENST00000380805 TAF1LQ8IZX4 1826 aa23.02■■□□□ 1.27
GMDS-201ENST00000380805 CHGBP05060 677 aa23.01■■□□□ 1.27
GMDS-201ENST00000380805 ZFYP08048 801 aaPredicted RBP23.01■■□□□ 1.27
GMDS-201ENST00000380805 CNNM1Q9NRU3 951 aa23.01■■□□□ 1.27
GMDS-201ENST00000380805 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.01■■□□□ 1.27
GMDS-201ENST00000380805 A0A1B0GUL6 1792 aa23.01■■□□□ 1.27
GMDS-201ENST00000380805 RPS6KB1P23443 525 aa23■■□□□ 1.27
GMDS-201ENST00000380805 BLOC1S2Q6QNY1 142 aa23■■□□□ 1.27
GMDS-201ENST00000380805 FGFR2P21802 821 aa22.99■■□□□ 1.27
GMDS-201ENST00000380805 ANKRD1Q15327 319 aa22.99■■□□□ 1.27
GMDS-201ENST00000380805 GORABQ5T7V8 394 aa22.99■■□□□ 1.27
GMDS-201ENST00000380805 RC3H1Q5TC82 1133 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms